RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
CDH13-203ENST00000431540 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
CDH13-203ENST00000431540 RGS12O14924 1447 aa12.38□□□□□ -0.43
CDH13-203ENST00000431540 ATRNO75882 1429 aa12.38□□□□□ -0.43
CDH13-203ENST00000431540 STAC3Q96MF2 364 aa12.38□□□□□ -0.43
CDH13-203ENST00000431540 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
CDH13-203ENST00000431540 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
CDH13-203ENST00000431540 MYOM2P54296 1465 aa12.37□□□□□ -0.43
CDH13-203ENST00000431540 PXDNQ92626 1479 aa12.37□□□□□ -0.43
CDH13-203ENST00000431540 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
CDH13-203ENST00000431540 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
CDH13-203ENST00000431540 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
CDH13-203ENST00000431540 PSME1Q06323 249 aa12.35□□□□□ -0.43
CDH13-203ENST00000431540 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
CDH13-203ENST00000431540 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CDH13-203ENST00000431540 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
CDH13-203ENST00000431540 MPHOSPH9Q99550 1183 aa12.34□□□□□ -0.43
CDH13-203ENST00000431540 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
CDH13-203ENST00000431540 FOXO3O43524 673 aa12.33□□□□□ -0.44
CDH13-203ENST00000431540 ONECUT3O60422 494 aaPredicted RBP12.33□□□□□ -0.44
CDH13-203ENST00000431540 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
CDH13-203ENST00000431540 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
CDH13-203ENST00000431540 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
CDH13-203ENST00000431540 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
CDH13-203ENST00000431540 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
CDH13-203ENST00000431540 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
CDH13-203ENST00000431540 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
CDH13-203ENST00000431540 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
CDH13-203ENST00000431540 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
CDH13-203ENST00000431540 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
CDH13-203ENST00000431540 SLIT2O94813 1529 aa12.31□□□□□ -0.44
CDH13-203ENST00000431540 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
CDH13-203ENST00000431540 EP400Q96L91 3159 aa12.3□□□□□ -0.44
CDH13-203ENST00000431540 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
CDH13-203ENST00000431540 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
CDH13-203ENST00000431540 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
CDH13-203ENST00000431540 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
CDH13-203ENST00000431540 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
CDH13-203ENST00000431540 DLC1Q96QB1 1528 aa12.28□□□□□ -0.44
CDH13-203ENST00000431540 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
CDH13-203ENST00000431540 HRCP23327 699 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 MMRN1Q13201 1228 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 VPS72Q15906 364 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 TSPYL2Q9H2G4 693 aaPredicted RBP12.27□□□□□ -0.45
CDH13-203ENST00000431540 STK26Q9P289 416 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
CDH13-203ENST00000431540 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
CDH13-203ENST00000431540 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.45
CDH13-203ENST00000431540 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
CDH13-203ENST00000431540 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
CDH13-203ENST00000431540 KIF12Q96FN5 646 aa12.26□□□□□ -0.45
CDH13-203ENST00000431540 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
CDH13-203ENST00000431540 TNS3Q68CZ2 1445 aa12.25□□□□□ -0.45
CDH13-203ENST00000431540 ADGRB2O60241 1585 aa12.24□□□□□ -0.45
CDH13-203ENST00000431540 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
CDH13-203ENST00000431540 GLI3P10071 1580 aa12.23□□□□□ -0.45
CDH13-203ENST00000431540 SPDYE4A6NLX3 237 aa12.23□□□□□ -0.45
CDH13-203ENST00000431540 ST18O60284 1047 aa12.23□□□□□ -0.45
CDH13-203ENST00000431540 SF3B2Q13435 895 aaKnown RBP12.23□□□□□ -0.45
CDH13-203ENST00000431540 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
CDH13-203ENST00000431540 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
CDH13-203ENST00000431540 PLEKHH1Q9ULM0 1364 aa12.22□□□□□ -0.45
CDH13-203ENST00000431540 TIE1P35590 1138 aa12.22□□□□□ -0.45
CDH13-203ENST00000431540 SEC24BO95487 1268 aa12.21□□□□□ -0.45
CDH13-203ENST00000431540 HAP1P54257 671 aaPredicted RBP12.21□□□□□ -0.45
CDH13-203ENST00000431540 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
CDH13-203ENST00000431540 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
CDH13-203ENST00000431540 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.46
CDH13-203ENST00000431540 ABCA3Q99758 1704 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 GPRASP1Q5JY77 1395 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
CDH13-203ENST00000431540 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 PRAM1Q96QH2 718 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 POGKQ9P215 609 aa12.2□□□□□ -0.46
CDH13-203ENST00000431540 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
CDH13-203ENST00000431540 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CDH13-203ENST00000431540 NUTM2FA1L443 756 aa12.19□□□□□ -0.46
CDH13-203ENST00000431540 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
CDH13-203ENST00000431540 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
CDH13-203ENST00000431540 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
CDH13-203ENST00000431540 FAM83GA6ND36 823 aa12.18□□□□□ -0.46
CDH13-203ENST00000431540 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
CDH13-203ENST00000431540 LRP5O75197 1615 aa12.16□□□□□ -0.46
CDH13-203ENST00000431540 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
CDH13-203ENST00000431540 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
CDH13-203ENST00000431540 BAG6P46379 1132 aa12.16□□□□□ -0.46
CDH13-203ENST00000431540 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
CDH13-203ENST00000431540 TULP4Q9NRJ4 1543 aa12.16□□□□□ -0.46
CDH13-203ENST00000431540 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
CDH13-203ENST00000431540 KIAA1210Q9ULL0 1709 aa12.14□□□□□ -0.47
CDH13-203ENST00000431540 SLAIN1Q8ND83 568 aa12.14□□□□□ -0.47
CDH13-203ENST00000431540 CRYBG1Q9Y4K1 1723 aa12.14□□□□□ -0.47
CDH13-203ENST00000431540 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
CDH13-203ENST00000431540 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CDH13-203ENST00000431540 MAP3K13O43283 966 aa12.13□□□□□ -0.47
CDH13-203ENST00000431540 CABLES1Q8TDN4 633 aa12.13□□□□□ -0.47
CDH13-203ENST00000431540 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
CDH13-203ENST00000431540 BRD4O60885 1362 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms