RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 PLCH1Q4KWH8 1693 aa23.36■■□□□ 1.33
AC055876.3-201ENST00000431496 PLEKHG3A1L390 1219 aa23.36■■□□□ 1.33
AC055876.3-201ENST00000431496 L3MBTL2Q969R5 705 aa23.36■■□□□ 1.33
AC055876.3-201ENST00000431496 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
AC055876.3-201ENST00000431496 ACEP12821 1306 aa23.34■■□□□ 1.33
AC055876.3-201ENST00000431496 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
AC055876.3-201ENST00000431496 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
AC055876.3-201ENST00000431496 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.32
AC055876.3-201ENST00000431496 SIN3AQ96ST3 1273 aa23.32■■□□□ 1.32
AC055876.3-201ENST00000431496 KRT27Q7Z3Y8 459 aa23.31■■□□□ 1.32
AC055876.3-201ENST00000431496 PRDM11Q9NQV5 511 aa23.31■■□□□ 1.32
AC055876.3-201ENST00000431496 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
AC055876.3-201ENST00000431496 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
AC055876.3-201ENST00000431496 COL14A1Q05707 1796 aaKnown RBP23.29■■□□□ 1.32
AC055876.3-201ENST00000431496 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
AC055876.3-201ENST00000431496 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
AC055876.3-201ENST00000431496 NUTM2GQ5VZR2 741 aa23.29■■□□□ 1.32
AC055876.3-201ENST00000431496 ZRANB1Q9UGI0 708 aa23.29■■□□□ 1.32
AC055876.3-201ENST00000431496 CABP2Q9NPB3 220 aa23.28■■□□□ 1.32
AC055876.3-201ENST00000431496 SPATA31A5Q5VU36 1347 aa23.28■■□□□ 1.32
AC055876.3-201ENST00000431496 SPATA31A7Q8IWB4 1347 aa23.28■■□□□ 1.32
AC055876.3-201ENST00000431496 NEUROD1Q13562 356 aa23.27■■□□□ 1.32
AC055876.3-201ENST00000431496 NRAPQ86VF7 1730 aa23.27■■□□□ 1.32
AC055876.3-201ENST00000431496 KIAA0232Q92628 1395 aa23.27■■□□□ 1.31
AC055876.3-201ENST00000431496 CRYBG1Q9Y4K1 1723 aa23.26■■□□□ 1.31
AC055876.3-201ENST00000431496 A0A0G2JS52 829 aa23.26■■□□□ 1.31
AC055876.3-201ENST00000431496 ZC3H6P61129 1189 aaKnown RBP23.26■■□□□ 1.31
AC055876.3-201ENST00000431496 MYT1Q01538 1121 aa23.26■■□□□ 1.31
AC055876.3-201ENST00000431496 ABTB2Q8N961 1025 aa23.26■■□□□ 1.31
AC055876.3-201ENST00000431496 CHRNA2Q15822 529 aa23.25■■□□□ 1.31
AC055876.3-201ENST00000431496 TOPAZ1Q8N9V7 1692 aa23.25■■□□□ 1.31
AC055876.3-201ENST00000431496 SRCAPQ6ZRS2 3230 aa23.24■■□□□ 1.31
AC055876.3-201ENST00000431496 SF3B2Q13435 895 aaKnown RBP23.24■■□□□ 1.31
AC055876.3-201ENST00000431496 DEFB132Q7Z7B7 95 aa23.23■■□□□ 1.31
AC055876.3-201ENST00000431496 PPIP5K1Q6PFW1 1433 aa23.23■■□□□ 1.31
AC055876.3-201ENST00000431496 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
AC055876.3-201ENST00000431496 NLRP13Q86W25 1043 aa23.2■■□□□ 1.3
AC055876.3-201ENST00000431496 SPATA31A1Q5TZJ5 1347 aa23.19■■□□□ 1.3
AC055876.3-201ENST00000431496 STRN4Q9NRL3 753 aa23.19■■□□□ 1.3
AC055876.3-201ENST00000431496 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
AC055876.3-201ENST00000431496 USP19O94966 1318 aa23.18■■□□□ 1.3
AC055876.3-201ENST00000431496 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
AC055876.3-201ENST00000431496 EVA1CP58658 441 aa23.17■■□□□ 1.3
AC055876.3-201ENST00000431496 PHRF1Q9P1Y6 1649 aaKnown RBP23.17■■□□□ 1.3
AC055876.3-201ENST00000431496 ROCK2O75116 1388 aaKnown RBP23.16■■□□□ 1.3
AC055876.3-201ENST00000431496 QRICH2Q9H0J4 1663 aa23.16■■□□□ 1.3
AC055876.3-201ENST00000431496 GCP02774 474 aa23.16■■□□□ 1.3
AC055876.3-201ENST00000431496 CPDO75976 1380 aa23.15■■□□□ 1.3
AC055876.3-201ENST00000431496 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
AC055876.3-201ENST00000431496 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
AC055876.3-201ENST00000431496 USP6P35125 1406 aa23.12■■□□□ 1.29
AC055876.3-201ENST00000431496 BAG6P46379 1132 aa23.12■■□□□ 1.29
AC055876.3-201ENST00000431496 NLRP6P59044 892 aa23.12■■□□□ 1.29
AC055876.3-201ENST00000431496 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
AC055876.3-201ENST00000431496 SSH2Q76I76 1423 aa23.11■■□□□ 1.29
AC055876.3-201ENST00000431496 LARP1Q6PKG0 1096 aaKnown RBP23.11■■□□□ 1.29
AC055876.3-201ENST00000431496 BARGINQ6ZT62 677 aa23.11■■□□□ 1.29
AC055876.3-201ENST00000431496 THSD7AQ9UPZ6 1657 aa23.11■■□□□ 1.29
AC055876.3-201ENST00000431496 CAMTA1Q9Y6Y1 1673 aa23.11■■□□□ 1.29
AC055876.3-201ENST00000431496 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
AC055876.3-201ENST00000431496 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
AC055876.3-201ENST00000431496 FAM196AQ6ZSG2 479 aa23.07■■□□□ 1.28
AC055876.3-201ENST00000431496 TCP11L2Q8N4U5 519 aa23.07■■□□□ 1.28
AC055876.3-201ENST00000431496 EN1Q05925 392 aaPredicted RBP23.06■■□□□ 1.28
AC055876.3-201ENST00000431496 LMO7Q8WWI1 1683 aa23.05■■□□□ 1.28
AC055876.3-201ENST00000431496 TTC21BQ7Z4L5 1316 aa23.05■■□□□ 1.28
AC055876.3-201ENST00000431496 PDE3BQ13370 1112 aa23.04■■□□□ 1.28
AC055876.3-201ENST00000431496 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
AC055876.3-201ENST00000431496 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
AC055876.3-201ENST00000431496 AATKQ6ZMQ8 1374 aa23.03■■□□□ 1.28
AC055876.3-201ENST00000431496 ZBTB7CA1YPR0 619 aa23.03■■□□□ 1.28
AC055876.3-201ENST00000431496 TRIM37O94972 964 aa23.02■■□□□ 1.28
AC055876.3-201ENST00000431496 COL5A2P05997 1499 aaPredicted RBP23.01■■□□□ 1.27
AC055876.3-201ENST00000431496 SLIT3O75094 1523 aa23.01■■□□□ 1.27
AC055876.3-201ENST00000431496 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
AC055876.3-201ENST00000431496 TTC21AQ8NDW8 1320 aa23■■□□□ 1.27
AC055876.3-201ENST00000431496 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
AC055876.3-201ENST00000431496 DISP2A7MBM2 1401 aa22.99■■□□□ 1.27
AC055876.3-201ENST00000431496 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
AC055876.3-201ENST00000431496 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
AC055876.3-201ENST00000431496 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
AC055876.3-201ENST00000431496 KCNH5Q8NCM2 988 aa22.98■■□□□ 1.27
AC055876.3-201ENST00000431496 AXIN2Q9Y2T1 843 aa22.98■■□□□ 1.27
AC055876.3-201ENST00000431496 KTN1Q86UP2 1357 aaKnown RBP22.98■■□□□ 1.27
AC055876.3-201ENST00000431496 CRB1P82279 1406 aa22.98■■□□□ 1.27
AC055876.3-201ENST00000431496 PIK3C2AO00443 1686 aa22.97■■□□□ 1.27
AC055876.3-201ENST00000431496 PSDA5PKW4 1024 aaPredicted RBP22.97■■□□□ 1.27
AC055876.3-201ENST00000431496 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
AC055876.3-201ENST00000431496 CAMKK2Q96RR4 588 aa22.97■■□□□ 1.27
AC055876.3-201ENST00000431496 APBA3O96018 575 aa22.96■■□□□ 1.27
AC055876.3-201ENST00000431496 TOM1L2Q6ZVM7 507 aa22.95■■□□□ 1.26
AC055876.3-201ENST00000431496 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
AC055876.3-201ENST00000431496 SOX12O15370 315 aa22.93■■□□□ 1.26
AC055876.3-201ENST00000431496 COL18A1P39060 1754 aa22.93■■□□□ 1.26
AC055876.3-201ENST00000431496 TNS1Q9HBL0 1735 aaKnown RBP22.93■■□□□ 1.26
AC055876.3-201ENST00000431496 WDR17Q8IZU2 1322 aa22.92■■□□□ 1.26
AC055876.3-201ENST00000431496 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
AC055876.3-201ENST00000431496 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
AC055876.3-201ENST00000431496 C11orf95C9JLR9 678 aaPredicted RBP22.91■■□□□ 1.26
AC055876.3-201ENST00000431496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms