RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
PTCD1-204ENST00000430982 ANKARQ7Z5J8 1434 aa21.8■■□□□ 1.08
PTCD1-204ENST00000430982 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
PTCD1-204ENST00000430982 NBPF1Q3BBV0 1214 aa21.8■■□□□ 1.08
PTCD1-204ENST00000430982 CRYBG1Q9Y4K1 1723 aa21.8■■□□□ 1.08
PTCD1-204ENST00000430982 FAM98CQ17RN3 349 aaKnown RBP21.79■■□□□ 1.08
PTCD1-204ENST00000430982 EN1Q05925 392 aaPredicted RBP21.78■■□□□ 1.08
PTCD1-204ENST00000430982 KIAA1210Q9ULL0 1709 aa21.75■■□□□ 1.07
PTCD1-204ENST00000430982 BTG4Q9NY30 223 aa21.75■■□□□ 1.07
PTCD1-204ENST00000430982 SPATA31A5Q5VU36 1347 aa21.75■■□□□ 1.07
PTCD1-204ENST00000430982 SPATA31A7Q8IWB4 1347 aa21.75■■□□□ 1.07
PTCD1-204ENST00000430982 R3HDM1Q15032 1099 aaKnown RBP21.74■■□□□ 1.07
PTCD1-204ENST00000430982 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
PTCD1-204ENST00000430982 A0A0G2JS52 829 aa21.73■■□□□ 1.07
PTCD1-204ENST00000430982 MYT1Q01538 1121 aa21.73■■□□□ 1.07
PTCD1-204ENST00000430982 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
PTCD1-204ENST00000430982 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
PTCD1-204ENST00000430982 LMOD2Q6P5Q4 547 aa21.72■■□□□ 1.07
PTCD1-204ENST00000430982 PLEKHG5O94827 1062 aa21.71■■□□□ 1.07
PTCD1-204ENST00000430982 FAM182BQ5T319 152 aa21.71■■□□□ 1.07
PTCD1-204ENST00000430982 RREB1Q92766 1687 aa21.7■■□□□ 1.06
PTCD1-204ENST00000430982 CAMKK2Q96RR4 588 aa21.7■■□□□ 1.06
PTCD1-204ENST00000430982 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
PTCD1-204ENST00000430982 PARD3Q8TEW0 1356 aa21.7■■□□□ 1.06
PTCD1-204ENST00000430982 EZH2Q15910 746 aaKnown RBP21.69■■□□□ 1.06
PTCD1-204ENST00000430982 PMFBP1Q8TBY8 1022 aa21.69■■□□□ 1.06
PTCD1-204ENST00000430982 CCER1Q8TC90 406 aaPredicted RBP21.69■■□□□ 1.06
PTCD1-204ENST00000430982 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
PTCD1-204ENST00000430982 TULP4Q9NRJ4 1543 aa21.67■■□□□ 1.06
PTCD1-204ENST00000430982 CLSPNQ9HAW4 1339 aa21.67■■□□□ 1.06
PTCD1-204ENST00000430982 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
PTCD1-204ENST00000430982 NUP188Q5SRE5 1749 aa21.66■■□□□ 1.06
PTCD1-204ENST00000430982 GPRASP1Q5JY77 1395 aa21.65■■□□□ 1.06
PTCD1-204ENST00000430982 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
PTCD1-204ENST00000430982 SPATA31A1Q5TZJ5 1347 aa21.64■■□□□ 1.05
PTCD1-204ENST00000430982 CENPJQ9HC77 1338 aaPredicted RBP21.64■■□□□ 1.05
PTCD1-204ENST00000430982 WASLO00401 505 aaPredicted RBP21.64■■□□□ 1.05
PTCD1-204ENST00000430982 EIF3AQ14152 1382 aaKnown RBP21.63■■□□□ 1.05
PTCD1-204ENST00000430982 PHRF1Q9P1Y6 1649 aaKnown RBP21.63■■□□□ 1.05
PTCD1-204ENST00000430982 FAM196AQ6ZSG2 479 aa21.62■■□□□ 1.05
PTCD1-204ENST00000430982 CARD11Q9BXL7 1154 aa21.61■■□□□ 1.05
PTCD1-204ENST00000430982 TRIM37O94972 964 aa21.59■■□□□ 1.05
PTCD1-204ENST00000430982 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
PTCD1-204ENST00000430982 PRDM11Q9NQV5 511 aa21.59■■□□□ 1.05
PTCD1-204ENST00000430982 KIAA0232Q92628 1395 aa21.58■■□□□ 1.04
PTCD1-204ENST00000430982 YY1P25490 414 aa21.57■■□□□ 1.04
PTCD1-204ENST00000430982 ITSN1Q15811 1721 aa21.56■■□□□ 1.04
PTCD1-204ENST00000430982 ATP7BP35670 1465 aa21.56■■□□□ 1.04
PTCD1-204ENST00000430982 APBA3O96018 575 aa21.55■■□□□ 1.04
PTCD1-204ENST00000430982 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
PTCD1-204ENST00000430982 NUDT16Q96DE0 195 aaKnown RBP21.55■■□□□ 1.04
PTCD1-204ENST00000430982 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
PTCD1-204ENST00000430982 SSH2Q76I76 1423 aa21.54■■□□□ 1.04
PTCD1-204ENST00000430982 LMO7Q8WWI1 1683 aa21.53■■□□□ 1.04
PTCD1-204ENST00000430982 SRPK2P78362 688 aaKnown RBP21.53■■□□□ 1.04
PTCD1-204ENST00000430982 NRKQ7Z2Y5 1582 aa21.53■■□□□ 1.04
PTCD1-204ENST00000430982 NINLQ9Y2I6 1382 aa21.52■■□□□ 1.04
PTCD1-204ENST00000430982 QRICH2Q9H0J4 1663 aa21.52■■□□□ 1.04
PTCD1-204ENST00000430982 RGPD3A6NKT7 1758 aaPredicted RBP21.51■■□□□ 1.03
PTCD1-204ENST00000430982 RGPD4Q7Z3J3 1758 aa21.51■■□□□ 1.03
PTCD1-204ENST00000430982 CHRNA2Q15822 529 aa21.51■■□□□ 1.03
PTCD1-204ENST00000430982 CABP2Q9NPB3 220 aa21.51■■□□□ 1.03
PTCD1-204ENST00000430982 CAMTA1Q9Y6Y1 1673 aa21.5■■□□□ 1.03
PTCD1-204ENST00000430982 NGDNQ8NEJ9 315 aaKnown RBP21.5■■□□□ 1.03
PTCD1-204ENST00000430982 TOPAZ1Q8N9V7 1692 aa21.5■■□□□ 1.03
PTCD1-204ENST00000430982 PARP4Q9UKK3 1724 aaKnown RBP21.49■■□□□ 1.03
PTCD1-204ENST00000430982 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
PTCD1-204ENST00000430982 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
PTCD1-204ENST00000430982 PAK3O75914 559 aaPredicted RBP21.48■■□□□ 1.03
PTCD1-204ENST00000430982 CCDC61Q9Y6R9 512 aa21.48■■□□□ 1.03
PTCD1-204ENST00000430982 PEAK1Q9H792 1746 aa21.48■■□□□ 1.03
PTCD1-204ENST00000430982 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
PTCD1-204ENST00000430982 CPDO75976 1380 aa21.48■■□□□ 1.03
PTCD1-204ENST00000430982 NBPF14Q5TI25 921 aa21.47■■□□□ 1.03
PTCD1-204ENST00000430982 SPON1Q9HCB6 807 aa21.47■■□□□ 1.03
PTCD1-204ENST00000430982 CASZ1Q86V15 1759 aa21.46■■□□□ 1.03
PTCD1-204ENST00000430982 KCNQ2O43526 872 aa21.45■■□□□ 1.02
PTCD1-204ENST00000430982 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
PTCD1-204ENST00000430982 PDE3BQ13370 1112 aa21.45■■□□□ 1.02
PTCD1-204ENST00000430982 LARP1Q6PKG0 1096 aaKnown RBP21.43■■□□□ 1.02
PTCD1-204ENST00000430982 TCP11L2Q8N4U5 519 aa21.43■■□□□ 1.02
PTCD1-204ENST00000430982 USP35Q9P2H5 1018 aa21.43■■□□□ 1.02
PTCD1-204ENST00000430982 THRAP3Q9Y2W1 955 aaKnown RBP21.43■■□□□ 1.02
PTCD1-204ENST00000430982 USP19O94966 1318 aa21.43■■□□□ 1.02
PTCD1-204ENST00000430982 PLEKHG3A1L390 1219 aa21.42■■□□□ 1.02
PTCD1-204ENST00000430982 PPIP5K1Q6PFW1 1433 aa21.42■■□□□ 1.02
PTCD1-204ENST00000430982 SBNO2Q9Y2G9 1366 aa21.41■■□□□ 1.02
PTCD1-204ENST00000430982 ACEP12821 1306 aa21.41■■□□□ 1.02
PTCD1-204ENST00000430982 ST20-MTHFSA0A0A6YYL1 179 aa21.41■■□□□ 1.02
PTCD1-204ENST00000430982 SBF2Q86WG5 1849 aa21.41■■□□□ 1.02
PTCD1-204ENST00000430982 COL5A2P05997 1499 aaPredicted RBP21.4■■□□□ 1.02
PTCD1-204ENST00000430982 C11orf95C9JLR9 678 aaPredicted RBP21.4■■□□□ 1.02
PTCD1-204ENST00000430982 PPP1R1BQ9UD71 204 aaPredicted RBP21.4■■□□□ 1.02
PTCD1-204ENST00000430982 USP47Q96K76 1375 aa21.39■■□□□ 1.02
PTCD1-204ENST00000430982 CABP1Q9NZU7 370 aa21.39■■□□□ 1.01
PTCD1-204ENST00000430982 LRRC37A3O60309 1634 aa21.39■■□□□ 1.01
PTCD1-204ENST00000430982 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
PTCD1-204ENST00000430982 OVOS2A0A0J9YW53 1432 aa21.38■■□□□ 1.01
PTCD1-204ENST00000430982 OVOS2Q6IE36 1432 aa21.38■■□□□ 1.01
PTCD1-204ENST00000430982 PLSCR1O15162 318 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms