RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TRAF1Q13077 416 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 RALBP1Q15311 655 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 PPP4R3BQ5MIZ7 849 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 SOGA3Q5TF21 947 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
LRRK2-204ENST00000430804 MPHOSPH9Q99550 1183 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 SLC5A4Q9NY91 659 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 A0A0U1RQG5 324 aaPredicted RBP5.48□□□□□ -1.53
LRRK2-204ENST00000430804 TNNT3P45378 269 aaPredicted RBP5.48□□□□□ -1.53
LRRK2-204ENST00000430804 PLCD3Q8N3E9 789 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 AFAP1Q8N556 730 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 ZNF408Q9H9D4 720 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 NOD1Q9Y239 953 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 FANCAO15360 1455 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 LDHCP07864 332 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 CC2D2AQ9P2K1 1620 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 ANKRD20A12PQ8NF67 263 aa5.48□□□□□ -1.53
LRRK2-204ENST00000430804 RWDD1Q9H446 243 aaPredicted RBP5.48□□□□□ -1.53
LRRK2-204ENST00000430804 PPP1R42Q7Z4L9 355 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 CCDC97Q96F63 343 aaPredicted RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 DIAPH3Q9NSV4 1193 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 RRBP1Q9P2E9 1410 aaKnown RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 EAPPQ56P03 285 aaPredicted RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 RNF20Q5VTR2 975 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 CDK19Q9BWU1 502 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 DNAJC5BQ9UF47 199 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 SUPT16HQ9Y5B9 1047 aaKnown RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 KIF16BQ96L93 1317 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 TPM3P06753 285 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 FKBP5Q13451 457 aaPredicted RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 CCDC57Q2TAC2 916 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 SPC25Q9HBM1 224 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 HOOK1Q9UJC3 728 aaKnown RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 ELMSAN1Q6PJG2 1045 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 RTCBQ9Y3I0 505 aaKnown RBP5.47□□□□□ -1.53
LRRK2-204ENST00000430804 ERC2O15083 957 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 FAM184AQ8NB25 1140 aa5.47□□□□□ -1.53
LRRK2-204ENST00000430804 RTEL1-TNFRSF6BF6WH68 1400 aa5.46□□□□□ -1.53
LRRK2-204ENST00000430804 TNRQ92752 1358 aa5.46□□□□□ -1.53
LRRK2-204ENST00000430804 ZNF76P36508 570 aa5.46□□□□□ -1.53
LRRK2-204ENST00000430804 XPCQ01831 940 aaPredicted RBP5.46□□□□□ -1.53
LRRK2-204ENST00000430804 FERMT2Q96AC1 680 aa5.46□□□□□ -1.53
LRRK2-204ENST00000430804 NYXQ9GZU5 481 aa5.46□□□□□ -1.53
LRRK2-204ENST00000430804 GRIN3BO60391 1043 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 GLRX3O76003 335 aaKnown RBP5.46□□□□□ -1.54
LRRK2-204ENST00000430804 TPM1P09493 284 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 ARHGAP27Q6ZUM4 889 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 TMEM106CQ9BVX2 250 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 C19orf44Q9H6X5 657 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 HLA-DOAP06340 250 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 AMOTQ4VCS5 1084 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 CREBRFQ8IUR6 639 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 IVNS1ABPQ9Y6Y0 642 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 ANKRD30BQ9BXX2 1392 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 PLCB2Q00722 1185 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 EP400NLQ6ZTU2 488 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 CDK5RAP3Q96JB5 506 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 API5Q9BZZ5 524 aaKnown RBP5.46□□□□□ -1.54
LRRK2-204ENST00000430804 GJA3Q9Y6H8 435 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 EPRSP07814 1512 aaKnown RBP5.46□□□□□ -1.54
LRRK2-204ENST00000430804 MYOM3Q5VTT5 1437 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 TTC39AQ5SRH9 613 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 CCDC30Q5VVM6 783 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 NBPF6Q5VWK0 638 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 NBPF5PQ86XG9 351 aaPredicted RBP5.46□□□□□ -1.54
LRRK2-204ENST00000430804 NBPF4Q96M43 638 aa5.46□□□□□ -1.54
LRRK2-204ENST00000430804 CCDC88BA6NC98 1476 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 PES1O00541 588 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 KIF4AO95239 1232 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CUL5Q93034 780 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 SETDB2Q96T68 719 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 QTRT2Q9H974 415 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 ABT1Q9ULW3 272 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 ZKSCAN1P17029 563 aaPredicted RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CEBPAP49715 358 aaPredicted RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 GNAI1P63096 354 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 MPRIPQ6WCQ1 1025 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 TNPO1Q92973 898 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CDC5LQ99459 802 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 UTP14AQ9BVJ6 771 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 AMOTL2Q9Y2J4 779 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 NOC2LQ9Y3T9 749 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 H3BQV1 296 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 H7C1D1 291 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 MATR3P43243 847 aaKnown RBP eCLIP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 IFFO2Q5TF58 517 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CCDC117Q8IWD4 279 aaPredicted RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 SLKQ9H2G2 1235 aaPredicted RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 GPHNQ9NQX3 736 aaPredicted RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 FCHSD2O94868 740 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 IFIT1P09914 478 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 TAF12Q16514 161 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 LRRFIP2Q9Y608 721 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 CNTLNQ9NXG0 1405 aa5.45□□□□□ -1.54
LRRK2-204ENST00000430804 NCBP1Q09161 790 aaKnown RBP5.45□□□□□ -1.54
LRRK2-204ENST00000430804 SNAPC4Q5SXM2 1469 aa5.44□□□□□ -1.54
LRRK2-204ENST00000430804 FOXO3O43524 673 aa5.44□□□□□ -1.54
LRRK2-204ENST00000430804 KRT18P05783 430 aaKnown RBP5.44□□□□□ -1.54
LRRK2-204ENST00000430804 SPTY2D1Q68D10 685 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms