RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
ATG4B-212ENST00000430617 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
ATG4B-212ENST00000430617 ARHGEF10O15013 1369 aa15.23■□□□□ 0.03
ATG4B-212ENST00000430617 PSME1Q06323 249 aa15.22■□□□□ 0.03
ATG4B-212ENST00000430617 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
ATG4B-212ENST00000430617 FAM196AQ6ZSG2 479 aa15.21■□□□□ 0.03
ATG4B-212ENST00000430617 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
ATG4B-212ENST00000430617 NBPF14Q5TI25 921 aa15.2■□□□□ 0.02
ATG4B-212ENST00000430617 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-212ENST00000430617 RGPD4Q7Z3J3 1758 aa15.2■□□□□ 0.02
ATG4B-212ENST00000430617 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
ATG4B-212ENST00000430617 RRBP1Q9P2E9 1410 aaKnown RBP15.18■□□□□ 0.02
ATG4B-212ENST00000430617 TMEM132EQ6IEE7 984 aa15.17■□□□□ 0.02
ATG4B-212ENST00000430617 SPATA31A1Q5TZJ5 1347 aa15.17■□□□□ 0.02
ATG4B-212ENST00000430617 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
ATG4B-212ENST00000430617 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
ATG4B-212ENST00000430617 PDGFDQ9GZP0 370 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-212ENST00000430617 PHRF1Q9P1Y6 1649 aaKnown RBP15.16■□□□□ 0.02
ATG4B-212ENST00000430617 ITGAEP38570 1179 aa15.15■□□□□ 0.02
ATG4B-212ENST00000430617 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
ATG4B-212ENST00000430617 PMFBP1Q8TBY8 1022 aa15.14■□□□□ 0.01
ATG4B-212ENST00000430617 PEAK1Q9H792 1746 aa15.14■□□□□ 0.01
ATG4B-212ENST00000430617 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
ATG4B-212ENST00000430617 YTHDC2Q9H6S0 1430 aaKnown RBP15.12■□□□□ 0.01
ATG4B-212ENST00000430617 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
ATG4B-212ENST00000430617 PTGER2P43116 358 aa15.11■□□□□ 0.01
ATG4B-212ENST00000430617 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
ATG4B-212ENST00000430617 USP35Q9P2H5 1018 aa15.1■□□□□ 0.01
ATG4B-212ENST00000430617 ZBTB7AO95365 584 aa15.09■□□□□ 0.01
ATG4B-212ENST00000430617 CHRNA2Q15822 529 aa15.09■□□□□ 0.01
ATG4B-212ENST00000430617 PRDM11Q9NQV5 511 aa15.09■□□□□ 0.01
ATG4B-212ENST00000430617 STRN4Q9NRL3 753 aa15.09■□□□□ 0.01
ATG4B-212ENST00000430617 PDE3BQ13370 1112 aa15.08■□□□□ 0
ATG4B-212ENST00000430617 SYT17Q9BSW7 474 aa15.08■□□□□ 0
ATG4B-212ENST00000430617 SHANK3Q9BYB0 1731 aa15.08■□□□□ 0
ATG4B-212ENST00000430617 KIAA0232Q92628 1395 aa15.08■□□□□ 0
ATG4B-212ENST00000430617 PIK3C2GO75747 1445 aa15.08■□□□□ 0
ATG4B-212ENST00000430617 FHDC1Q9C0D6 1143 aaPredicted RBP15.07■□□□□ 0
ATG4B-212ENST00000430617 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
ATG4B-212ENST00000430617 AKAP12Q02952 1782 aa15.06■□□□□ 0
ATG4B-212ENST00000430617 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
ATG4B-212ENST00000430617 ANKARQ7Z5J8 1434 aa15.06■□□□□ 0
ATG4B-212ENST00000430617 DLC1Q96QB1 1528 aa15.06■□□□□ 0
ATG4B-212ENST00000430617 LMO7Q8WWI1 1683 aa15.06■□□□□ 0
ATG4B-212ENST00000430617 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
ATG4B-212ENST00000430617 BARGINQ6ZT62 677 aa15.05■□□□□ -0
ATG4B-212ENST00000430617 SIRT1Q96EB6 747 aa15.05■□□□□ -0
ATG4B-212ENST00000430617 LRRC37A3O60309 1634 aa15.04■□□□□ -0
ATG4B-212ENST00000430617 SSH2Q76I76 1423 aa15.04■□□□□ -0
ATG4B-212ENST00000430617 GIGYF1O75420 1035 aaPredicted RBP15.04■□□□□ -0
ATG4B-212ENST00000430617 ITSN1Q15811 1721 aa15.03■□□□□ -0
ATG4B-212ENST00000430617 ACIN1Q9UKV3 1341 aaKnown RBP15.03■□□□□ -0
ATG4B-212ENST00000430617 RGL3Q3MIN7 710 aa15.03■□□□□ -0
ATG4B-212ENST00000430617 PTF1AQ7RTS3 328 aa15.03■□□□□ -0
ATG4B-212ENST00000430617 SPATA31E1Q6ZUB1 1445 aa15.02■□□□□ -0
ATG4B-212ENST00000430617 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
ATG4B-212ENST00000430617 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
ATG4B-212ENST00000430617 PLSCR1O15162 318 aa15.01□□□□□ -0.01
ATG4B-212ENST00000430617 ZC3H6P61129 1189 aaKnown RBP15.01□□□□□ -0.01
ATG4B-212ENST00000430617 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
ATG4B-212ENST00000430617 PROM2Q8N271 834 aa15.01□□□□□ -0.01
ATG4B-212ENST00000430617 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
ATG4B-212ENST00000430617 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
ATG4B-212ENST00000430617 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
ATG4B-212ENST00000430617 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
ATG4B-212ENST00000430617 PCGF6Q9BYE7 350 aa14.99□□□□□ -0.01
ATG4B-212ENST00000430617 TULP4Q9NRJ4 1543 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 EVA1CP58658 441 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 BCL11BQ9C0K0 894 aaPredicted RBP14.98□□□□□ -0.01
ATG4B-212ENST00000430617 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
ATG4B-212ENST00000430617 HIRIP3Q9BW71 556 aaPredicted RBP14.97□□□□□ -0.01
ATG4B-212ENST00000430617 ATP7BP35670 1465 aa14.96□□□□□ -0.01
ATG4B-212ENST00000430617 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
ATG4B-212ENST00000430617 NUTM2GQ5VZR2 741 aa14.96□□□□□ -0.01
ATG4B-212ENST00000430617 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
ATG4B-212ENST00000430617 C14orf93Q9H972 538 aaKnown RBP14.96□□□□□ -0.01
ATG4B-212ENST00000430617 DHX57Q6P158 1386 aaKnown RBP14.96□□□□□ -0.02
ATG4B-212ENST00000430617 RGPD5Q99666 1765 aa14.96□□□□□ -0.02
ATG4B-212ENST00000430617 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
ATG4B-212ENST00000430617 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
ATG4B-212ENST00000430617 MTFR1LQ9H019 292 aa14.94□□□□□ -0.02
ATG4B-212ENST00000430617 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
ATG4B-212ENST00000430617 SLC15A2Q16348 729 aa14.93□□□□□ -0.02
ATG4B-212ENST00000430617 GPR162Q16538 588 aa14.93□□□□□ -0.02
ATG4B-212ENST00000430617 MAP3K5Q99683 1374 aa14.93□□□□□ -0.02
ATG4B-212ENST00000430617 COL5A2P05997 1499 aaPredicted RBP14.93□□□□□ -0.02
ATG4B-212ENST00000430617 TOPAZ1Q8N9V7 1692 aa14.93□□□□□ -0.02
ATG4B-212ENST00000430617 PAPPAQ13219 1627 aa14.92□□□□□ -0.02
ATG4B-212ENST00000430617 TUBGCP6Q96RT7 1819 aa14.92□□□□□ -0.02
ATG4B-212ENST00000430617 ARXQ96QS3 562 aa14.92□□□□□ -0.02
ATG4B-212ENST00000430617 POGKQ9P215 609 aa14.92□□□□□ -0.02
ATG4B-212ENST00000430617 THRAP3Q9Y2W1 955 aaKnown RBP14.92□□□□□ -0.02
ATG4B-212ENST00000430617 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
ATG4B-212ENST00000430617 STK32BQ9NY57 414 aa14.91□□□□□ -0.02
ATG4B-212ENST00000430617 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
ATG4B-212ENST00000430617 QSER1Q2KHR3 1735 aa14.9□□□□□ -0.02
ATG4B-212ENST00000430617 C11orf95C9JLR9 678 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms