RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 ATP10BO94823 1461 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 DIP2BQ9P265 1576 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 SHPRHQ149N8 1683 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 NUCB2P80303 420 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CDCA8Q53HL2 280 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 LRSAM1Q6UWE0 723 aa17.23■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CBX1P83916 185 aa17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 NCBP3Q53F19 620 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 UNC13BO14795 1591 aa17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 ARHGEF5Q12774 1597 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 ATP10AO60312 1499 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 KIF3AQ9Y496 699 aa17.2■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 KDM5AP29375 1690 aaKnown RBP17.19■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 FEZ1Q99689 392 aa17.18■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 CT47B1P0C2W7 299 aaPredicted RBP17.18■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 SPTLC3Q9NUV7 552 aa17.18■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 CEP152O94986 1710 aa17.18■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.17■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 GABPB1Q06547 395 aaPredicted RBP17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 MCTP1Q6DN14 999 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 ANKRD7Q92527 254 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 NUCB1Q02818 461 aa17.15■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 PDCL2Q8N4E4 241 aa17.15■□□□□ 0.34
CSNK1A1P1-201ENST00000430593 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 CWC22Q9HCG8 908 aaKnown RBP17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 DDX19BQ9UMR2 479 aa17.14■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 MBD3O95983 291 aa17.13■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 GLI2P10070 1586 aa17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 DNTTIP2Q5QJE6 756 aaKnown RBP17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 ZNF830Q96NB3 372 aaPredicted RBP17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 CTIFO43310 598 aaKnown RBP17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 RABEP1Q15276 862 aa17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 OGFRQ9NZT2 677 aa17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 SYCP1Q15431 976 aa17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
CSNK1A1P1-201ENST00000430593 SYCE3A1L190 88 aa17.08■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 TSC1Q92574 1164 aa17.08■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 KIAA1210Q9ULL0 1709 aa17.07■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 MAP3K4Q9Y6R4 1608 aa17.07■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 CHD1LQ86WJ1 897 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 JARID2Q92833 1246 aaPredicted RBP17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 FAM193AP78312 1265 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 DNAJC2Q99543 621 aaKnown RBP17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 PRPF40AO75400 957 aaKnown RBP17.05■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 ZNF771Q7L3S4 317 aaPredicted RBP17.05■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 IRX5P78411 483 aaPredicted RBP17.05■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
CSNK1A1P1-201ENST00000430593 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms