RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
LINC01238-203ENST00000429456 GGNBP2Q9H3C7 697 aa14.67□□□□□ -0.06
LINC01238-203ENST00000429456 STK26Q9P289 416 aa14.67□□□□□ -0.06
LINC01238-203ENST00000429456 TRIM35Q9UPQ4 493 aa14.67□□□□□ -0.06
LINC01238-203ENST00000429456 PREX1Q8TCU6 1659 aa14.67□□□□□ -0.06
LINC01238-203ENST00000429456 BECN1Q14457 450 aa14.67□□□□□ -0.06
LINC01238-203ENST00000429456 TSR2Q969E8 191 aaKnown RBP14.67□□□□□ -0.06
LINC01238-203ENST00000429456 FYB1O15117 783 aa14.66□□□□□ -0.06
LINC01238-203ENST00000429456 IL16Q14005 1332 aa14.66□□□□□ -0.06
LINC01238-203ENST00000429456 U2SURPO15042 1029 aaKnown RBP14.66□□□□□ -0.06
LINC01238-203ENST00000429456 EXOSC9Q06265 439 aaKnown RBP14.66□□□□□ -0.06
LINC01238-203ENST00000429456 FTSJ3Q8IY81 847 aaKnown RBP14.66□□□□□ -0.06
LINC01238-203ENST00000429456 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
LINC01238-203ENST00000429456 TBC1D32Q96NH3 1257 aa14.65□□□□□ -0.06
LINC01238-203ENST00000429456 YTHDC2Q9H6S0 1430 aaKnown RBP14.65□□□□□ -0.06
LINC01238-203ENST00000429456 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
LINC01238-203ENST00000429456 YEATS2Q9ULM3 1422 aa14.64□□□□□ -0.07
LINC01238-203ENST00000429456 UPF2Q9HAU5 1272 aaKnown RBP14.64□□□□□ -0.07
LINC01238-203ENST00000429456 PNPLA6Q8IY17 1366 aa14.63□□□□□ -0.07
LINC01238-203ENST00000429456 MINK1Q8N4C8 1332 aaPredicted RBP14.63□□□□□ -0.07
LINC01238-203ENST00000429456 TRIM27P14373 513 aa14.63□□□□□ -0.07
LINC01238-203ENST00000429456 SSH1Q8WYL5 1049 aa14.63□□□□□ -0.07
LINC01238-203ENST00000429456 PRAM1Q96QH2 718 aa14.63□□□□□ -0.07
LINC01238-203ENST00000429456 HDAC1Q13547 482 aaPredicted RBP14.63□□□□□ -0.07
LINC01238-203ENST00000429456 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
LINC01238-203ENST00000429456 KIF20BQ96Q89 1820 aa14.62□□□□□ -0.07
LINC01238-203ENST00000429456 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
LINC01238-203ENST00000429456 ATF7IPQ6VMQ6 1270 aa14.61□□□□□ -0.07
LINC01238-203ENST00000429456 POGKQ9P215 609 aa14.61□□□□□ -0.07
LINC01238-203ENST00000429456 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
LINC01238-203ENST00000429456 ALKQ9UM73 1620 aa14.61□□□□□ -0.07
LINC01238-203ENST00000429456 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
LINC01238-203ENST00000429456 RIPK4P57078 832 aa14.6□□□□□ -0.07
LINC01238-203ENST00000429456 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
LINC01238-203ENST00000429456 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
LINC01238-203ENST00000429456 ANTXR1Q9H6X2 564 aa14.6□□□□□ -0.07
LINC01238-203ENST00000429456 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
LINC01238-203ENST00000429456 NOB1Q9ULX3 412 aaKnown RBP14.6□□□□□ -0.07
LINC01238-203ENST00000429456 CDK19Q9BWU1 502 aa14.59□□□□□ -0.07
LINC01238-203ENST00000429456 ITPRIPQ8IWB1 547 aa14.58□□□□□ -0.07
LINC01238-203ENST00000429456 BRPF3Q9ULD4 1205 aa14.58□□□□□ -0.07
LINC01238-203ENST00000429456 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
LINC01238-203ENST00000429456 TBC1D2Q9BYX2 928 aa14.58□□□□□ -0.08
LINC01238-203ENST00000429456 FCHSD2O94868 740 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 SLKQ9H2G2 1235 aaPredicted RBP14.57□□□□□ -0.08
LINC01238-203ENST00000429456 KIF16BQ96L93 1317 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 TMEM57Q8N5G2 664 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 ZBTB40Q9NUA8 1239 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 CABP1Q9NZU7 370 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
LINC01238-203ENST00000429456 ALDH1L2Q3SY69 923 aa14.56□□□□□ -0.08
LINC01238-203ENST00000429456 FBXO31Q5XUX0 539 aaPredicted RBP14.56□□□□□ -0.08
LINC01238-203ENST00000429456 IPO8O15397 1037 aaKnown RBP14.56□□□□□ -0.08
LINC01238-203ENST00000429456 FAM135BQ49AJ0 1406 aa14.55□□□□□ -0.08
LINC01238-203ENST00000429456 DLC1Q96QB1 1528 aa14.55□□□□□ -0.08
LINC01238-203ENST00000429456 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
LINC01238-203ENST00000429456 UBE2Q2Q8WVN8 375 aa14.54□□□□□ -0.08
LINC01238-203ENST00000429456 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
LINC01238-203ENST00000429456 PPIP5K1Q6PFW1 1433 aa14.54□□□□□ -0.08
LINC01238-203ENST00000429456 BRPF1P55201 1214 aaPredicted RBP14.54□□□□□ -0.08
LINC01238-203ENST00000429456 ATP7BP35670 1465 aa14.54□□□□□ -0.08
LINC01238-203ENST00000429456 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
LINC01238-203ENST00000429456 POLKQ9UBT6 870 aa14.53□□□□□ -0.08
LINC01238-203ENST00000429456 ZNF428Q96B54 188 aa14.53□□□□□ -0.08
LINC01238-203ENST00000429456 MAP2P11137 1827 aaKnown RBP14.52□□□□□ -0.08
LINC01238-203ENST00000429456 PRKAR2BP31323 418 aa14.52□□□□□ -0.08
LINC01238-203ENST00000429456 SETD1AO15047 1707 aaKnown RBP14.52□□□□□ -0.09
LINC01238-203ENST00000429456 MFAP1P55081 439 aaKnown RBP14.51□□□□□ -0.09
LINC01238-203ENST00000429456 NUCB1Q02818 461 aa14.51□□□□□ -0.09
LINC01238-203ENST00000429456 ANO8Q9HCE9 1232 aaPredicted RBP14.51□□□□□ -0.09
LINC01238-203ENST00000429456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.5□□□□□ -0.09
LINC01238-203ENST00000429456 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 RIMBP3CA6NJZ7 1639 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 RIMBP3BA6NNM3 1639 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 RIMBP3Q9UFD9 1639 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 A2ML1A8K2U0 1454 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
LINC01238-203ENST00000429456 FBLN1P23142 703 aa14.49□□□□□ -0.09
LINC01238-203ENST00000429456 WAPLQ7Z5K2 1190 aa14.49□□□□□ -0.09
LINC01238-203ENST00000429456 PHACTR3Q96KR7 559 aa14.49□□□□□ -0.09
LINC01238-203ENST00000429456 PIK3R4Q99570 1358 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 VAMP4O75379 141 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 ADRA2BP18089 450 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 MRPL50Q8N5N7 158 aaKnown RBP14.48□□□□□ -0.09
LINC01238-203ENST00000429456 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 REREQ9P2R6 1566 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 CPSF1Q10570 1443 aaKnown RBP14.48□□□□□ -0.09
LINC01238-203ENST00000429456 PTCH1Q13635 1447 aa14.48□□□□□ -0.09
LINC01238-203ENST00000429456 CALD1Q05682 793 aaKnown RBP14.47□□□□□ -0.09
LINC01238-203ENST00000429456 AGLP35573 1532 aa14.47□□□□□ -0.09
LINC01238-203ENST00000429456 RIMS2Q9UQ26 1411 aa14.47□□□□□ -0.09
LINC01238-203ENST00000429456 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
LINC01238-203ENST00000429456 ZBTB7BO15156 539 aaPredicted RBP14.47□□□□□ -0.09
LINC01238-203ENST00000429456 IL13P35225 146 aa14.47□□□□□ -0.09
LINC01238-203ENST00000429456 CHD1LQ86WJ1 897 aa14.47□□□□□ -0.09
LINC01238-203ENST00000429456 EDC4Q6P2E9 1401 aaKnown RBP14.47□□□□□ -0.09
LINC01238-203ENST00000429456 CDK12Q9NYV4 1490 aaPredicted RBP14.46□□□□□ -0.09
LINC01238-203ENST00000429456 HMOX1P09601 288 aa14.46□□□□□ -0.09
LINC01238-203ENST00000429456 ZNF853P0CG23 659 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms