RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 RALGAPBQ86X10 1494 aa10.93□□□□□ -0.66
CDC42BPA-206ENST00000429440 HSCBQ8IWL3 235 aa10.93□□□□□ -0.66
CDC42BPA-206ENST00000429440 PLXNC1O60486 1568 aa10.93□□□□□ -0.66
CDC42BPA-206ENST00000429440 ARHGAP5Q13017 1502 aa10.93□□□□□ -0.66
CDC42BPA-206ENST00000429440 USP47Q96K76 1375 aa10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 ZCCHC11Q5TAX3 1644 aaKnown RBP10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 U2AF2P26368 475 aaKnown RBP eCLIP10.92□□□□□ -0.668e-6■■■■□ 25
CDC42BPA-206ENST00000429440 TERF2Q15554 542 aa10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 CEP120Q8N960 986 aa10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 CTR9Q6PD62 1173 aa10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 CARD10Q9BWT7 1032 aa10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 BLMP54132 1417 aaPredicted RBP10.92□□□□□ -0.66
CDC42BPA-206ENST00000429440 PHF14O94880 888 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 SNX21Q969T3 373 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 FEZ2Q9UHY8 353 aaPredicted RBP10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 RTEL1-TNFRSF6BF6WH68 1400 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 NLRP13Q86W25 1043 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 TSC1Q92574 1164 aa10.91□□□□□ -0.66
CDC42BPA-206ENST00000429440 PIBF1Q8WXW3 757 aa10.9□□□□□ -0.66
CDC42BPA-206ENST00000429440 SYCP1Q15431 976 aa10.9□□□□□ -0.67
CDC42BPA-206ENST00000429440 DDX49Q9Y6V7 483 aaKnown RBP10.9□□□□□ -0.67
CDC42BPA-206ENST00000429440 UHRF1BP1LA0JNW5 1464 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 CTIFO43310 598 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 JARID2Q92833 1246 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 C22orf23Q9BZE7 217 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 RBSNQ9H1K0 784 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 NPC1L1Q9UHC9 1359 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 DIAPH3Q9NSV4 1193 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 MORC2Q9Y6X9 1032 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
CDC42BPA-206ENST00000429440 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 IGHDP01880 384 aa10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 MYCBPQ99417 103 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 LMOD3Q0VAK6 560 aa10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 FKBP5Q13451 457 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 SPTLC3Q9NUV7 552 aa10.88□□□□□ -0.67
CDC42BPA-206ENST00000429440 PLCH2O75038 1416 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 LOC102724159A0A0B4J2E5 919 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 TNNT3P45378 269 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 NOLC1Q14978 699 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 PWP2Q15269 919 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 ABCC1P33527 1531 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 NOP2P46087 812 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 ZSCAN23Q3MJ62 389 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 CHMP4CQ96CF2 233 aa10.87□□□□□ -0.67
CDC42BPA-206ENST00000429440 TRPM1Q7Z4N2 1603 aa10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 MCCP23508 829 aa10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 CGNL1Q0VF96 1302 aa10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 BRPF1P55201 1214 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 C14orf37Q86TY3 774 aa10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 BRMS1Q9HCU9 246 aa10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
CDC42BPA-206ENST00000429440 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 SIRT1Q96EB6 747 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 E9PCH4 1651 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 RAD50Q92878 1312 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 DUOX2Q9NRD8 1548 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 BANK1Q8NDB2 785 aa10.85□□□□□ -0.67
CDC42BPA-206ENST00000429440 GTF2A1P52655 376 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 PARD3Q8TEW0 1356 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 PRAG1Q86YV5 1406 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 A2MP01023 1474 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 ZBTB9Q96C00 473 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 CEP83Q9Y592 693 aa10.84□□□□□ -0.67
CDC42BPA-206ENST00000429440 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 ATP10AO60312 1499 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 PRIM1P49642 420 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 PDE3AQ14432 1141 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 ICE2Q659A1 982 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 KRT222Q8N1A0 295 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
CDC42BPA-206ENST00000429440 DHX16O60231 1041 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 PMFBP1Q8TBY8 1022 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 ARAP3Q8WWN8 1544 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 SPINK5Q9NQ38 1064 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 RSPH14Q9UHP6 348 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
CDC42BPA-206ENST00000429440 ST20-MTHFSA0A0A6YYL1 179 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 CCDC172P0C7W6 258 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 RASSF4Q9H2L5 321 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 FAM177BA6PVY3 158 aa10.81□□□□□ -0.68
CDC42BPA-206ENST00000429440 GUCY2CP25092 1073 aa10.81□□□□□ -0.68
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