RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KINO60870 393 aaKnown RBP15.31■□□□□ 0.04
LDB3-205ENST00000429277 SMARCE1Q969G3 411 aa15.31■□□□□ 0.04
LDB3-205ENST00000429277 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.31■□□□□ 0.04
LDB3-205ENST00000429277 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.31■□□□□ 0.04
LDB3-205ENST00000429277 GNAI2P04899 355 aa15.3■□□□□ 0.04
LDB3-205ENST00000429277 TATP17735 454 aaPredicted RBP15.3■□□□□ 0.04
LDB3-205ENST00000429277 CCT4P50991 539 aaKnown RBP15.3■□□□□ 0.04
LDB3-205ENST00000429277 ANKRD1Q15327 319 aa15.3■□□□□ 0.04
LDB3-205ENST00000429277 RRP12Q5JTH9 1297 aaKnown RBP15.3■□□□□ 0.04
LDB3-205ENST00000429277 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
LDB3-205ENST00000429277 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
LDB3-205ENST00000429277 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
LDB3-205ENST00000429277 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
LDB3-205ENST00000429277 PANK1Q8TE04 598 aa15.29■□□□□ 0.04
LDB3-205ENST00000429277 KRI1Q8N9T8 703 aaKnown RBP15.29■□□□□ 0.04
LDB3-205ENST00000429277 NOM1Q5C9Z4 860 aaKnown RBP15.29■□□□□ 0.04
LDB3-205ENST00000429277 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
LDB3-205ENST00000429277 PDIA4P13667 645 aaKnown RBP15.28■□□□□ 0.04
LDB3-205ENST00000429277 TWISTNBQ3B726 338 aaPredicted RBP15.28■□□□□ 0.04
LDB3-205ENST00000429277 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
LDB3-205ENST00000429277 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
LDB3-205ENST00000429277 AEBP1Q8IUX7 1158 aa15.27■□□□□ 0.04
LDB3-205ENST00000429277 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
LDB3-205ENST00000429277 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.04
LDB3-205ENST00000429277 PPP2R1AP30153 589 aa15.27■□□□□ 0.04
LDB3-205ENST00000429277 THEMISQ8N1K5 641 aaPredicted RBP15.27■□□□□ 0.04
LDB3-205ENST00000429277 PRKAR2BP31323 418 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 WWC2Q6AWC2 1192 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 TXLNBQ8N3L3 684 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.03
LDB3-205ENST00000429277 ZSCAN25Q6NSZ9 544 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 ZNF428Q96B54 188 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 NACAP1Q9BZK3 213 aa15.27■□□□□ 0.03
LDB3-205ENST00000429277 NASPP49321 788 aaPredicted RBP15.26■□□□□ 0.03
LDB3-205ENST00000429277 IKQ13123 557 aaPredicted RBP15.26■□□□□ 0.03
LDB3-205ENST00000429277 TXNDC2Q86VQ3 553 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 SRCIN1Q9C0H9 1055 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 ZNF644Q9H582 1327 aaPredicted RBP15.26■□□□□ 0.03
LDB3-205ENST00000429277 CCAR1Q8IX12 1150 aaKnown RBP15.26■□□□□ 0.03
LDB3-205ENST00000429277 RAD54L2Q9Y4B4 1467 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 LUC7LQ9NQ29 371 aaKnown RBP15.26■□□□□ 0.03
LDB3-205ENST00000429277 DACH1Q9UI36 760 aa15.26■□□□□ 0.03
LDB3-205ENST00000429277 FYB1O15117 783 aa15.25■□□□□ 0.03
LDB3-205ENST00000429277 WDR63Q8IWG1 891 aa15.25■□□□□ 0.03
LDB3-205ENST00000429277 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.03
LDB3-205ENST00000429277 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
LDB3-205ENST00000429277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.25■□□□□ 0.03
LDB3-205ENST00000429277 DCAF8L1A6NGE4 600 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 CAGE1Q8TC20 777 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 TTC39AQ5SRH9 613 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 TRIM22Q8IYM9 498 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 EFCAB5A4FU69 1503 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 NEK4P51957 841 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
LDB3-205ENST00000429277 SPG7Q9UQ90 795 aa15.24■□□□□ 0.03
LDB3-205ENST00000429277 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 PDILTQ8N807 584 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
LDB3-205ENST00000429277 CFAP70Q5T0N1 1121 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 FOSBP53539 338 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 EXOSC9Q06265 439 aaKnown RBP15.23■□□□□ 0.03
LDB3-205ENST00000429277 STK38Q15208 465 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 TRIM5Q9C035 493 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 CYP46A1Q9Y6A2 500 aa15.23■□□□□ 0.03
LDB3-205ENST00000429277 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
LDB3-205ENST00000429277 SYCP1Q15431 976 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 KIAA1107Q9UPP5 1409 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 STIM1Q13586 685 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 NFKBIBQ15653 356 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 ZFYVE27Q5T4F4 411 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 FAM13BQ9NYF5 915 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 ZNHIT6Q9NWK9 470 aaKnown RBP15.22■□□□□ 0.03
LDB3-205ENST00000429277 EHBP1L1Q8N3D4 1523 aa15.22■□□□□ 0.03
LDB3-205ENST00000429277 CWC15Q9P013 229 aaKnown RBP15.21■□□□□ 0.03
LDB3-205ENST00000429277 LRRCC1Q9C099 1032 aa15.21■□□□□ 0.03
LDB3-205ENST00000429277 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
LDB3-205ENST00000429277 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.02
LDB3-205ENST00000429277 CDKL5O76039 1030 aa15.2■□□□□ 0.02
LDB3-205ENST00000429277 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
LDB3-205ENST00000429277 NUTM2GQ5VZR2 741 aa15.2■□□□□ 0.02
LDB3-205ENST00000429277 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
LDB3-205ENST00000429277 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
LDB3-205ENST00000429277 TRAK2O60296 914 aa15.2■□□□□ 0.02
LDB3-205ENST00000429277 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
LDB3-205ENST00000429277 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
LDB3-205ENST00000429277 CTNNA3Q9UI47 895 aa15.19■□□□□ 0.02
LDB3-205ENST00000429277 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
LDB3-205ENST00000429277 CABP4P57796 275 aa15.19■□□□□ 0.02
LDB3-205ENST00000429277 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
LDB3-205ENST00000429277 ERLIN2O94905 339 aa15.19■□□□□ 0.02
LDB3-205ENST00000429277 NOL7Q9UMY1 257 aaKnown RBP15.19■□□□□ 0.02
LDB3-205ENST00000429277 SMC2O95347 1197 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms