RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 EXOC6Q8TAG9 804 aa25.92■■□□□ 1.74
CASC4-203ENST00000429162 PTCH1Q13635 1447 aa25.92■■□□□ 1.74
CASC4-203ENST00000429162 PTPRUQ92729 1446 aa25.92■■□□□ 1.74
CASC4-203ENST00000429162 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
CASC4-203ENST00000429162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.91■■□□□ 1.74
CASC4-203ENST00000429162 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
CASC4-203ENST00000429162 CCDC27Q2M243 656 aa25.9■■□□□ 1.74
CASC4-203ENST00000429162 SLC26A8Q96RN1 970 aa25.9■■□□□ 1.74
CASC4-203ENST00000429162 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
CASC4-203ENST00000429162 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.89■■□□□ 1.74
CASC4-203ENST00000429162 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
CASC4-203ENST00000429162 PRR36Q9H6K5 1346 aa25.87■■□□□ 1.73
CASC4-203ENST00000429162 PLIN1O60240 522 aa25.86■■□□□ 1.73
CASC4-203ENST00000429162 XRN1Q8IZH2 1706 aaKnown RBP25.86■■□□□ 1.73
CASC4-203ENST00000429162 WDR63Q8IWG1 891 aa25.86■■□□□ 1.73
CASC4-203ENST00000429162 ZNF692Q9BU19 519 aaPredicted RBP25.86■■□□□ 1.73
CASC4-203ENST00000429162 NRKQ7Z2Y5 1582 aa25.85■■□□□ 1.73
CASC4-203ENST00000429162 ZNF142P52746 1687 aaPredicted RBP25.85■■□□□ 1.73
CASC4-203ENST00000429162 U2SURPO15042 1029 aaKnown RBP25.85■■□□□ 1.73
CASC4-203ENST00000429162 DIAPH1O60610 1272 aaKnown RBP25.85■■□□□ 1.73
CASC4-203ENST00000429162 RRP7AQ9Y3A4 280 aaKnown RBP25.85■■□□□ 1.73
CASC4-203ENST00000429162 DMRT2Q9Y5R5 561 aa25.85■■□□□ 1.73
CASC4-203ENST00000429162 NEUROD2Q15784 382 aa25.84■■□□□ 1.73
CASC4-203ENST00000429162 AMOTL2Q9Y2J4 779 aa25.84■■□□□ 1.73
CASC4-203ENST00000429162 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
CASC4-203ENST00000429162 AATKQ6ZMQ8 1374 aa25.83■■□□□ 1.72
CASC4-203ENST00000429162 CDK12Q9NYV4 1490 aaPredicted RBP25.82■■□□□ 1.72
CASC4-203ENST00000429162 CRBNQ96SW2 442 aa25.82■■□□□ 1.72
CASC4-203ENST00000429162 PNNQ9H307 717 aaKnown RBP25.82■■□□□ 1.72
CASC4-203ENST00000429162 NCKAP5LQ9HCH0 1330 aa25.81■■□□□ 1.72
CASC4-203ENST00000429162 NME9Q86XW9 330 aa25.81■■□□□ 1.72
CASC4-203ENST00000429162 MAPK8IP3Q9UPT6 1336 aa25.81■■□□□ 1.72
CASC4-203ENST00000429162 POLKQ9UBT6 870 aa25.8■■□□□ 1.72
CASC4-203ENST00000429162 RBM19Q9Y4C8 960 aaKnown RBP25.8■■□□□ 1.72
CASC4-203ENST00000429162 MAP2P11137 1827 aaKnown RBP25.8■■□□□ 1.72
CASC4-203ENST00000429162 PIK3R4Q99570 1358 aa25.8■■□□□ 1.72
CASC4-203ENST00000429162 PLEKHF1Q96S99 279 aa25.8■■□□□ 1.72
CASC4-203ENST00000429162 COG3Q96JB2 828 aa25.79■■□□□ 1.72
CASC4-203ENST00000429162 PLEKHG3A1L390 1219 aa25.78■■□□□ 1.72
CASC4-203ENST00000429162 LRRC7Q96NW7 1537 aa25.77■■□□□ 1.72
CASC4-203ENST00000429162 C20orf194Q5TEA3 1177 aa25.75■■□□□ 1.71
CASC4-203ENST00000429162 MYH16Q9H6N6 1097 aa25.75■■□□□ 1.71
CASC4-203ENST00000429162 USP6P35125 1406 aa25.75■■□□□ 1.71
CASC4-203ENST00000429162 ACEP12821 1306 aa25.74■■□□□ 1.71
CASC4-203ENST00000429162 TMPOP42166 694 aaKnown RBP25.73■■□□□ 1.71
CASC4-203ENST00000429162 PPM1GO15355 546 aaPredicted RBP25.73■■□□□ 1.71
CASC4-203ENST00000429162 TTC21BQ7Z4L5 1316 aa25.72■■□□□ 1.71
CASC4-203ENST00000429162 FCHSD2O94868 740 aa25.72■■□□□ 1.71
CASC4-203ENST00000429162 ZRANB1Q9UGI0 708 aa25.72■■□□□ 1.71
CASC4-203ENST00000429162 NALCNQ8IZF0 1738 aa25.71■■□□□ 1.71
CASC4-203ENST00000429162 OVOS2A0A0J9YW53 1432 aa25.71■■□□□ 1.71
CASC4-203ENST00000429162 OVOS2Q6IE36 1432 aa25.71■■□□□ 1.71
CASC4-203ENST00000429162 EMILIN1Q9Y6C2 1016 aa25.71■■□□□ 1.71
CASC4-203ENST00000429162 ANKARQ7Z5J8 1434 aa25.7■■□□□ 1.7
CASC4-203ENST00000429162 BCAR3O75815 825 aa25.69■■□□□ 1.7
CASC4-203ENST00000429162 FBLN1P23142 703 aa25.69■■□□□ 1.7
CASC4-203ENST00000429162 NEFMP07197 916 aa25.68■■□□□ 1.7
CASC4-203ENST00000429162 RSPH6AQ9H0K4 717 aa25.68■■□□□ 1.7
CASC4-203ENST00000429162 IL16Q14005 1332 aa25.68■■□□□ 1.7
CASC4-203ENST00000429162 NUTM2FA1L443 756 aa25.67■■□□□ 1.7
CASC4-203ENST00000429162 ANKLE2Q86XL3 938 aa25.67■■□□□ 1.7
CASC4-203ENST00000429162 FMN2Q9NZ56 1722 aa25.67■■□□□ 1.7
CASC4-203ENST00000429162 SSH2Q76I76 1423 aa25.67■■□□□ 1.7
CASC4-203ENST00000429162 TRIM35Q9UPQ4 493 aa25.66■■□□□ 1.7
CASC4-203ENST00000429162 TTC21AQ8NDW8 1320 aa25.65■■□□□ 1.7
CASC4-203ENST00000429162 IL13P35225 146 aa25.65■■□□□ 1.7
CASC4-203ENST00000429162 CHD2O14647 1828 aaKnown RBP25.65■■□□□ 1.7
CASC4-203ENST00000429162 KCNA6P17658 529 aa25.65■■□□□ 1.7
CASC4-203ENST00000429162 CT47B1P0C2W7 299 aaPredicted RBP25.64■■□□□ 1.69
CASC4-203ENST00000429162 PRKAR2BP31323 418 aa25.64■■□□□ 1.69
CASC4-203ENST00000429162 RARSP54136 660 aaKnown RBP25.63■■□□□ 1.69
CASC4-203ENST00000429162 RIPK4P57078 832 aa25.63■■□□□ 1.69
CASC4-203ENST00000429162 PDE3AQ14432 1141 aa25.63■■□□□ 1.69
CASC4-203ENST00000429162 CANXP27824 592 aaKnown RBP25.63■■□□□ 1.69
CASC4-203ENST00000429162 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
CASC4-203ENST00000429162 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
CASC4-203ENST00000429162 RRS1Q15050 365 aaKnown RBP25.62■■□□□ 1.69
CASC4-203ENST00000429162 USP31Q70CQ4 1352 aa25.62■■□□□ 1.69
CASC4-203ENST00000429162 FANCIQ9NVI1 1328 aa25.61■■□□□ 1.69
CASC4-203ENST00000429162 NGDNQ8NEJ9 315 aaKnown RBP25.58■■□□□ 1.69
CASC4-203ENST00000429162 HMOX1P09601 288 aa25.57■■□□□ 1.68
CASC4-203ENST00000429162 NFE2L2Q16236 605 aa25.57■■□□□ 1.68
CASC4-203ENST00000429162 PMFBP1Q8TBY8 1022 aa25.57■■□□□ 1.68
CASC4-203ENST00000429162 TCERG1O14776 1098 aaKnown RBP25.57■■□□□ 1.68
CASC4-203ENST00000429162 CENPQQ7L2Z9 268 aaPredicted RBP25.56■■□□□ 1.68
CASC4-203ENST00000429162 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
CASC4-203ENST00000429162 PIK3C2AO00443 1686 aa25.55■■□□□ 1.68
CASC4-203ENST00000429162 PEAK1Q9H792 1746 aa25.55■■□□□ 1.68
CASC4-203ENST00000429162 TSR2Q969E8 191 aaKnown RBP25.55■■□□□ 1.68
CASC4-203ENST00000429162 NPHP4O75161 1426 aaPredicted RBP25.54■■□□□ 1.68
CASC4-203ENST00000429162 CALD1Q05682 793 aaKnown RBP25.53■■□□□ 1.68
CASC4-203ENST00000429162 USP54Q70EL1 1684 aa25.53■■□□□ 1.68
CASC4-203ENST00000429162 FRAT1Q92837 279 aaPredicted RBP25.53■■□□□ 1.68
CASC4-203ENST00000429162 EXOSC9Q06265 439 aaKnown RBP25.51■■□□□ 1.67
CASC4-203ENST00000429162 PHACTR3Q96KR7 559 aa25.51■■□□□ 1.67
CASC4-203ENST00000429162 LMOD3Q0VAK6 560 aa25.51■■□□□ 1.67
CASC4-203ENST00000429162 RGPD1P0DJD0 1748 aa25.51■■□□□ 1.67
CASC4-203ENST00000429162 EIF4A2Q14240 407 aaKnown RBP25.5■■□□□ 1.67
CASC4-203ENST00000429162 ADGRL3Q9HAR2 1447 aa25.49■■□□□ 1.67
CASC4-203ENST00000429162 MS4A1P11836 297 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms