RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
SYNGAP1-203ENST00000428982 SASS6Q6UVJ0 657 aa17.83■□□□□ 0.44
SYNGAP1-203ENST00000428982 ZMYM4Q5VZL5 1548 aa17.82■□□□□ 0.44
SYNGAP1-203ENST00000428982 HSP90AB1P08238 724 aaKnown RBP17.82■□□□□ 0.44
SYNGAP1-203ENST00000428982 XPCQ01831 940 aaPredicted RBP17.82■□□□□ 0.44
SYNGAP1-203ENST00000428982 ZMYM3Q14202 1370 aa17.81■□□□□ 0.44
SYNGAP1-203ENST00000428982 GPRASP1Q5JY77 1395 aa17.81■□□□□ 0.44
SYNGAP1-203ENST00000428982 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
SYNGAP1-203ENST00000428982 NPATQ14207 1427 aa17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 PDE3AQ14432 1141 aa17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 COL17A1Q9UMD9 1497 aaPredicted RBP17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 GLI2P10070 1586 aa17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
SYNGAP1-203ENST00000428982 SCAF11Q99590 1463 aaKnown RBP17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 UNC13BO14795 1591 aa17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 CFAP65Q6ZU64 1925 aaKnown RBP17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 LMOD2Q6P5Q4 547 aa17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 ANKLE2Q86XL3 938 aa17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 FSD2A1L4K1 749 aa17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 ZNF830Q96NB3 372 aaPredicted RBP17.79■□□□□ 0.44
SYNGAP1-203ENST00000428982 APAF1O14727 1248 aa17.78■□□□□ 0.44
SYNGAP1-203ENST00000428982 CCDC146Q8IYE0 955 aa17.78■□□□□ 0.44
SYNGAP1-203ENST00000428982 PER1O15534 1290 aaPredicted RBP17.78■□□□□ 0.44
SYNGAP1-203ENST00000428982 NGDNQ8NEJ9 315 aaKnown RBP17.78■□□□□ 0.44
SYNGAP1-203ENST00000428982 RIPK4P57078 832 aa17.77■□□□□ 0.44
SYNGAP1-203ENST00000428982 CABP2Q9NPB3 220 aa17.77■□□□□ 0.44
SYNGAP1-203ENST00000428982 HMGN5P82970 282 aaKnown RBP17.77■□□□□ 0.43
SYNGAP1-203ENST00000428982 TEX2Q8IWB9 1127 aa17.77■□□□□ 0.43
SYNGAP1-203ENST00000428982 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 DDX49Q9Y6V7 483 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 INO80Q9ULG1 1556 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 SLFN5Q08AF3 891 aa17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 U2SURPO15042 1029 aaKnown RBP17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 ERBB4Q15303 1308 aa17.76■□□□□ 0.43
SYNGAP1-203ENST00000428982 TET3O43151 1660 aa17.75■□□□□ 0.43
SYNGAP1-203ENST00000428982 DISP3Q9P2K9 1392 aa17.75■□□□□ 0.43
SYNGAP1-203ENST00000428982 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
SYNGAP1-203ENST00000428982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYNGAP1-203ENST00000428982 TRPM2O94759 1503 aa17.74■□□□□ 0.43
SYNGAP1-203ENST00000428982 SECISBP2LQ93073 1101 aaKnown RBP17.74■□□□□ 0.43
SYNGAP1-203ENST00000428982 TMEM51Q9NW97 253 aa17.74■□□□□ 0.43
SYNGAP1-203ENST00000428982 TESK2Q96S53 571 aa17.73■□□□□ 0.43
SYNGAP1-203ENST00000428982 IGSF3O75054 1194 aa17.73■□□□□ 0.43
SYNGAP1-203ENST00000428982 CLUAP1Q96AJ1 413 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 SOX12O15370 315 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 BCORL1Q5H9F3 1711 aa17.72■□□□□ 0.43
SYNGAP1-203ENST00000428982 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
SYNGAP1-203ENST00000428982 PDCL2Q8N4E4 241 aa17.71■□□□□ 0.43
SYNGAP1-203ENST00000428982 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
SYNGAP1-203ENST00000428982 PTPRTO14522 1441 aa17.71■□□□□ 0.43
SYNGAP1-203ENST00000428982 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
SYNGAP1-203ENST00000428982 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-203ENST00000428982 TSPYL1Q9H0U9 437 aa17.7■□□□□ 0.42
SYNGAP1-203ENST00000428982 ABCC3O15438 1527 aa17.7■□□□□ 0.42
SYNGAP1-203ENST00000428982 NKTRP30414 1462 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-203ENST00000428982 EFCAB6Q5THR3 1501 aa17.69■□□□□ 0.42
SYNGAP1-203ENST00000428982 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
SYNGAP1-203ENST00000428982 NPC1L1Q9UHC9 1359 aa17.69■□□□□ 0.42
SYNGAP1-203ENST00000428982 PIK3C2GO75747 1445 aa17.69■□□□□ 0.42
SYNGAP1-203ENST00000428982 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 SLC12A5Q9H2X9 1139 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 KIF3AQ9Y496 699 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 ATAD2Q6PL18 1390 aa17.68■□□□□ 0.42
SYNGAP1-203ENST00000428982 PRDM15P57071 1507 aaPredicted RBP17.67■□□□□ 0.42
SYNGAP1-203ENST00000428982 CLGNO14967 610 aa17.67■□□□□ 0.42
SYNGAP1-203ENST00000428982 ASXL1Q8IXJ9 1541 aa17.67■□□□□ 0.42
SYNGAP1-203ENST00000428982 DIP2CQ9Y2E4 1556 aa17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 MFAP1P55081 439 aaKnown RBP17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 COG3Q96JB2 828 aa17.66■□□□□ 0.42
SYNGAP1-203ENST00000428982 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.42
SYNGAP1-203ENST00000428982 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.42
SYNGAP1-203ENST00000428982 CALCOCO1Q9P1Z2 691 aa17.64■□□□□ 0.42
SYNGAP1-203ENST00000428982 ARHGAP31Q2M1Z3 1444 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 HDAC5Q9UQL6 1122 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 TRIM34Q9BYJ4 488 aa17.64■□□□□ 0.41
SYNGAP1-203ENST00000428982 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
SYNGAP1-203ENST00000428982 ABCA6Q8N139 1617 aa17.63■□□□□ 0.41
SYNGAP1-203ENST00000428982 C20orf194Q5TEA3 1177 aa17.63■□□□□ 0.41
SYNGAP1-203ENST00000428982 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
SYNGAP1-203ENST00000428982 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms