RNA–Protein interactions for RNA: ENST00000428939.3

HOTAIRM1-202, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 2 BASIC

Gene HOTAIRM1, Length 889 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-202ENST00000428939 FYB1O15117 783 aa16.29■□□□□ 0.2
HOTAIRM1-202ENST00000428939 ATF3P18847 181 aa16.29■□□□□ 0.2
HOTAIRM1-202ENST00000428939 DCCP43146 1447 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 POLR3AO14802 1390 aaPredicted RBP16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 MSH6P52701 1360 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 USP6P35125 1406 aa16.28■□□□□ 0.2
HOTAIRM1-202ENST00000428939 STRCP1A6NGW2 1772 aa16.26■□□□□ 0.19
HOTAIRM1-202ENST00000428939 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
HOTAIRM1-202ENST00000428939 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
HOTAIRM1-202ENST00000428939 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
HOTAIRM1-202ENST00000428939 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
HOTAIRM1-202ENST00000428939 TTC21BQ7Z4L5 1316 aa16.25■□□□□ 0.19
HOTAIRM1-202ENST00000428939 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
HOTAIRM1-202ENST00000428939 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
HOTAIRM1-202ENST00000428939 NME9Q86XW9 330 aa16.24■□□□□ 0.19
HOTAIRM1-202ENST00000428939 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
HOTAIRM1-202ENST00000428939 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
HOTAIRM1-202ENST00000428939 C1orf167Q5SNV9 1468 aa16.23■□□□□ 0.19
HOTAIRM1-202ENST00000428939 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
HOTAIRM1-202ENST00000428939 COG3Q96JB2 828 aa16.23■□□□□ 0.19
HOTAIRM1-202ENST00000428939 SSH2Q76I76 1423 aa16.22■□□□□ 0.19
HOTAIRM1-202ENST00000428939 MST1RQ04912 1400 aa16.21■□□□□ 0.19
HOTAIRM1-202ENST00000428939 CENPBP07199 599 aaPredicted RBP16.21■□□□□ 0.19
HOTAIRM1-202ENST00000428939 ORAI2Q96SN7 254 aa16.21■□□□□ 0.19
HOTAIRM1-202ENST00000428939 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
HOTAIRM1-202ENST00000428939 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
HOTAIRM1-202ENST00000428939 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
HOTAIRM1-202ENST00000428939 MTHFSP49914 203 aa16.19■□□□□ 0.18
HOTAIRM1-202ENST00000428939 PSME1Q06323 249 aa16.19■□□□□ 0.18
HOTAIRM1-202ENST00000428939 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
HOTAIRM1-202ENST00000428939 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
HOTAIRM1-202ENST00000428939 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
HOTAIRM1-202ENST00000428939 RGPD8O14715 1765 aaPredicted RBP16.18■□□□□ 0.18
HOTAIRM1-202ENST00000428939 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
HOTAIRM1-202ENST00000428939 USP31Q70CQ4 1352 aa16.16■□□□□ 0.18
HOTAIRM1-202ENST00000428939 FOXO3O43524 673 aa16.16■□□□□ 0.18
HOTAIRM1-202ENST00000428939 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
HOTAIRM1-202ENST00000428939 OVOS2A0A0J9YW53 1432 aa16.16■□□□□ 0.18
HOTAIRM1-202ENST00000428939 OVOS2Q6IE36 1432 aa16.16■□□□□ 0.18
HOTAIRM1-202ENST00000428939 AATKQ6ZMQ8 1374 aa16.15■□□□□ 0.18
HOTAIRM1-202ENST00000428939 KIF1AQ12756 1690 aa16.15■□□□□ 0.18
HOTAIRM1-202ENST00000428939 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
HOTAIRM1-202ENST00000428939 INSRP06213 1382 aa16.13■□□□□ 0.17
HOTAIRM1-202ENST00000428939 NLRP6P59044 892 aa16.13■□□□□ 0.17
HOTAIRM1-202ENST00000428939 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
HOTAIRM1-202ENST00000428939 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
HOTAIRM1-202ENST00000428939 SLAIN2Q9P270 581 aa16.12■□□□□ 0.17
HOTAIRM1-202ENST00000428939 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
HOTAIRM1-202ENST00000428939 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
HOTAIRM1-202ENST00000428939 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
HOTAIRM1-202ENST00000428939 XPCQ01831 940 aaPredicted RBP16.11■□□□□ 0.17
HOTAIRM1-202ENST00000428939 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
HOTAIRM1-202ENST00000428939 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
HOTAIRM1-202ENST00000428939 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
HOTAIRM1-202ENST00000428939 U3KPZ7 1027 aaPredicted RBP16.1■□□□□ 0.17
HOTAIRM1-202ENST00000428939 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
HOTAIRM1-202ENST00000428939 LTBP4Q8N2S1 1624 aa16.09■□□□□ 0.17
HOTAIRM1-202ENST00000428939 FBLN1P23142 703 aa16.09■□□□□ 0.17
HOTAIRM1-202ENST00000428939 NUTM2GQ5VZR2 741 aa16.09■□□□□ 0.17
HOTAIRM1-202ENST00000428939 PNPLA6Q8IY17 1366 aa16.09■□□□□ 0.17
HOTAIRM1-202ENST00000428939 PIK3C2AO00443 1686 aa16.08■□□□□ 0.17
HOTAIRM1-202ENST00000428939 SOX12O15370 315 aa16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 RRS1Q15050 365 aaKnown RBP16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 EMILIN1Q9Y6C2 1016 aa16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
HOTAIRM1-202ENST00000428939 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
HOTAIRM1-202ENST00000428939 LMOD2Q6P5Q4 547 aa16.07■□□□□ 0.16
HOTAIRM1-202ENST00000428939 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
HOTAIRM1-202ENST00000428939 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
HOTAIRM1-202ENST00000428939 KCNH5Q8NCM2 988 aa16.05■□□□□ 0.16
HOTAIRM1-202ENST00000428939 DDX17Q92841 729 aaKnown RBP16.05■□□□□ 0.16
HOTAIRM1-202ENST00000428939 U2SURPO15042 1029 aaKnown RBP16.04■□□□□ 0.16
HOTAIRM1-202ENST00000428939 U2AF1L5P0DN76 240 aaPredicted RBP16.04■□□□□ 0.16
HOTAIRM1-202ENST00000428939 U2AF1Q01081 240 aaKnown RBP eCLIP16.04■□□□□ 0.16
HOTAIRM1-202ENST00000428939 USP54Q70EL1 1684 aa16.04■□□□□ 0.16
HOTAIRM1-202ENST00000428939 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
HOTAIRM1-202ENST00000428939 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
HOTAIRM1-202ENST00000428939 AMPHP49418 695 aa16.03■□□□□ 0.16
HOTAIRM1-202ENST00000428939 PXDNQ92626 1479 aa16.03■□□□□ 0.16
HOTAIRM1-202ENST00000428939 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.16
HOTAIRM1-202ENST00000428939 USP19O94966 1318 aa16.02■□□□□ 0.16
HOTAIRM1-202ENST00000428939 ARHGEF10O15013 1369 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 FLT4P35916 1363 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 SPATA31A3Q5VYP0 1347 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 SHPRHQ149N8 1683 aa16.01■□□□□ 0.15
HOTAIRM1-202ENST00000428939 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
HOTAIRM1-202ENST00000428939 IL13P35225 146 aa16■□□□□ 0.15
HOTAIRM1-202ENST00000428939 RUNDC1Q96C34 613 aa16■□□□□ 0.15
HOTAIRM1-202ENST00000428939 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
HOTAIRM1-202ENST00000428939 SLIT3O75094 1523 aa15.99■□□□□ 0.15
HOTAIRM1-202ENST00000428939 GCP02774 474 aa15.99■□□□□ 0.15
HOTAIRM1-202ENST00000428939 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms