RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 LMOD2Q6P5Q4 547 aa31.04■■■□□ 2.56
PTPN18-205ENST00000428843 HDGFL2Q7Z4V5 671 aaPredicted RBP31.04■■■□□ 2.56
PTPN18-205ENST00000428843 BRD4O60885 1362 aaPredicted RBP31.04■■■□□ 2.56
PTPN18-205ENST00000428843 SPATA31A6Q5VVP1 1343 aa31.03■■■□□ 2.56
PTPN18-205ENST00000428843 TERF2IPQ9NYB0 399 aa31.03■■■□□ 2.56
PTPN18-205ENST00000428843 A0A1W2PP64 1363 aa31.03■■■□□ 2.56
PTPN18-205ENST00000428843 ARHGEF10O15013 1369 aa31.03■■■□□ 2.56
PTPN18-205ENST00000428843 NRKQ7Z2Y5 1582 aa31.02■■■□□ 2.56
PTPN18-205ENST00000428843 SSH2Q76I76 1423 aa31.02■■■□□ 2.56
PTPN18-205ENST00000428843 ANKRD36BQ8N2N9 1353 aa30.99■■■□□ 2.55
PTPN18-205ENST00000428843 KIF7Q2M1P5 1343 aa30.98■■■□□ 2.55
PTPN18-205ENST00000428843 NUTM2BA6NNL0 878 aaPredicted RBP30.97■■■□□ 2.55
PTPN18-205ENST00000428843 NUTM2EB1AL46 878 aaPredicted RBP30.97■■■□□ 2.55
PTPN18-205ENST00000428843 NUTM2AQ8IVF1 878 aaPredicted RBP30.97■■■□□ 2.55
PTPN18-205ENST00000428843 LRP6O75581 1613 aa30.97■■■□□ 2.55
PTPN18-205ENST00000428843 TTC21BQ7Z4L5 1316 aa30.97■■■□□ 2.55
PTPN18-205ENST00000428843 MED1Q15648 1581 aaPredicted RBP30.96■■■□□ 2.55
PTPN18-205ENST00000428843 ABTB2Q8N961 1025 aa30.95■■■□□ 2.55
PTPN18-205ENST00000428843 PLEKHG5O94827 1062 aa30.94■■■□□ 2.54
PTPN18-205ENST00000428843 EDC4Q6P2E9 1401 aaKnown RBP30.94■■■□□ 2.54
PTPN18-205ENST00000428843 PIK3C2AO00443 1686 aa30.93■■■□□ 2.54
PTPN18-205ENST00000428843 ABCA3Q99758 1704 aa30.93■■■□□ 2.54
PTPN18-205ENST00000428843 NUTM2GQ5VZR2 741 aa30.93■■■□□ 2.54
PTPN18-205ENST00000428843 TTC21AQ8NDW8 1320 aa30.93■■■□□ 2.54
PTPN18-205ENST00000428843 CABLES1Q8TDN4 633 aa30.92■■■□□ 2.54
PTPN18-205ENST00000428843 CRYBG1Q9Y4K1 1723 aa30.92■■■□□ 2.54
PTPN18-205ENST00000428843 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
PTPN18-205ENST00000428843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.91■■■□□ 2.544e-7■■■□□ 18.6
PTPN18-205ENST00000428843 WASHC2AQ641Q2 1341 aa30.9■■■□□ 2.54
PTPN18-205ENST00000428843 PHRF1Q9P1Y6 1649 aaKnown RBP30.87■■■□□ 2.53
PTPN18-205ENST00000428843 NLRP6P59044 892 aa30.86■■■□□ 2.53
PTPN18-205ENST00000428843 NLRP13Q86W25 1043 aa30.86■■■□□ 2.53
PTPN18-205ENST00000428843 CARD14Q9BXL6 1004 aa30.86■■■□□ 2.53
PTPN18-205ENST00000428843 MARF1Q9Y4F3 1742 aaKnown RBP30.85■■■□□ 2.53
PTPN18-205ENST00000428843 ADAMTS2O95450 1211 aa30.85■■■□□ 2.53
PTPN18-205ENST00000428843 HAP1P54257 671 aaPredicted RBP30.85■■■□□ 2.53
PTPN18-205ENST00000428843 MEX3CQ5U5Q3 659 aaKnown RBP30.85■■■□□ 2.53
PTPN18-205ENST00000428843 NME9Q86XW9 330 aa30.85■■■□□ 2.53
PTPN18-205ENST00000428843 NSD3Q9BZ95 1437 aa30.83■■■□□ 2.53
PTPN18-205ENST00000428843 USP19O94966 1318 aa30.83■■■□□ 2.53
PTPN18-205ENST00000428843 PANK3Q9H999 370 aa30.83■■■□□ 2.53
PTPN18-205ENST00000428843 ZRANB1Q9UGI0 708 aa30.82■■■□□ 2.52
PTPN18-205ENST00000428843 USP54Q70EL1 1684 aa30.81■■■□□ 2.52
PTPN18-205ENST00000428843 USP31Q70CQ4 1352 aa30.79■■■□□ 2.52
PTPN18-205ENST00000428843 SLIT3O75094 1523 aa30.79■■■□□ 2.52
PTPN18-205ENST00000428843 KIF20BQ96Q89 1820 aa30.79■■■□□ 2.52
PTPN18-205ENST00000428843 C8orf37Q96NL8 207 aa30.77■■■□□ 2.52
PTPN18-205ENST00000428843 GCP02774 474 aa30.75■■■□□ 2.51
PTPN18-205ENST00000428843 OVOS2A0A0J9YW53 1432 aa30.74■■■□□ 2.51
PTPN18-205ENST00000428843 OVOS2Q6IE36 1432 aa30.74■■■□□ 2.51
PTPN18-205ENST00000428843 FYB1O15117 783 aa30.74■■■□□ 2.51
PTPN18-205ENST00000428843 ZC3H6P61129 1189 aaKnown RBP30.72■■■□□ 2.51
PTPN18-205ENST00000428843 PHF23Q9BUL5 403 aaPredicted RBP30.72■■■□□ 2.51
PTPN18-205ENST00000428843 NGLY1Q96IV0 654 aa30.71■■■□□ 2.51
PTPN18-205ENST00000428843 GGNBP2Q9H3C7 697 aa30.71■■■□□ 2.51
PTPN18-205ENST00000428843 COG3Q96JB2 828 aa30.7■■■□□ 2.51
PTPN18-205ENST00000428843 CGNL1Q0VF96 1302 aa30.7■■■□□ 2.5
PTPN18-205ENST00000428843 KIAA0232Q92628 1395 aa30.69■■■□□ 2.5
PTPN18-205ENST00000428843 FAM83GA6ND36 823 aa30.69■■■□□ 2.5
PTPN18-205ENST00000428843 KCNH5Q8NCM2 988 aa30.69■■■□□ 2.5
PTPN18-205ENST00000428843 AFF2P51816 1311 aa30.69■■■□□ 2.5
PTPN18-205ENST00000428843 SOX12O15370 315 aa30.68■■■□□ 2.5
PTPN18-205ENST00000428843 NFAT5O94916 1531 aa30.68■■■□□ 2.5
PTPN18-205ENST00000428843 COL14A1Q05707 1796 aaKnown RBP30.67■■■□□ 2.5
PTPN18-205ENST00000428843 PRDM11Q9NQV5 511 aa30.67■■■□□ 2.5
PTPN18-205ENST00000428843 PLCH1Q4KWH8 1693 aa30.67■■■□□ 2.5
PTPN18-205ENST00000428843 CPDO75976 1380 aa30.66■■■□□ 2.5
PTPN18-205ENST00000428843 RGS17Q9UGC6 210 aaPredicted RBP30.66■■■□□ 2.5
PTPN18-205ENST00000428843 KNSTRNQ9Y448 316 aa30.66■■■□□ 2.5
PTPN18-205ENST00000428843 FNBP4Q8N3X1 1017 aaPredicted RBP30.65■■■□□ 2.5
PTPN18-205ENST00000428843 CHRNA2Q15822 529 aa30.64■■■□□ 2.5
PTPN18-205ENST00000428843 ANKRD26Q9UPS8 1709 aa30.64■■■□□ 2.5
PTPN18-205ENST00000428843 SLIT2O94813 1529 aa30.63■■■□□ 2.49
PTPN18-205ENST00000428843 PER1O15534 1290 aaPredicted RBP30.63■■■□□ 2.49
PTPN18-205ENST00000428843 NWD2Q9ULI1 1742 aa30.62■■■□□ 2.49
PTPN18-205ENST00000428843 ZBTB7CA1YPR0 619 aa30.61■■■□□ 2.49
PTPN18-205ENST00000428843 ARHGEF25Q86VW2 580 aa30.6■■■□□ 2.49
PTPN18-205ENST00000428843 USP21Q9UK80 565 aa30.6■■■□□ 2.49
PTPN18-205ENST00000428843 BCL9LQ86UU0 1499 aa30.59■■■□□ 2.49
PTPN18-205ENST00000428843 ZNF772Q68DY9 489 aaPredicted RBP30.59■■■□□ 2.49
PTPN18-205ENST00000428843 LTN1O94822 1766 aa30.59■■■□□ 2.49
PTPN18-205ENST00000428843 LMO7Q8WWI1 1683 aa30.58■■■□□ 2.49
PTPN18-205ENST00000428843 NSD2O96028 1365 aa30.58■■■□□ 2.49
PTPN18-205ENST00000428843 AMER1Q5JTC6 1135 aaPredicted RBP30.58■■■□□ 2.49
PTPN18-205ENST00000428843 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.58■■■□□ 2.49
PTPN18-205ENST00000428843 COL18A1P39060 1754 aa30.57■■■□□ 2.48
PTPN18-205ENST00000428843 NRAPQ86VF7 1730 aa30.57■■■□□ 2.48
PTPN18-205ENST00000428843 BTG4Q9NY30 223 aa30.57■■■□□ 2.48
PTPN18-205ENST00000428843 FBLN1P23142 703 aa30.56■■■□□ 2.48
PTPN18-205ENST00000428843 AATKQ6ZMQ8 1374 aa30.55■■■□□ 2.48
PTPN18-205ENST00000428843 ZNF316A6NFI3 1004 aaPredicted RBP30.55■■■□□ 2.48
PTPN18-205ENST00000428843 UNC5CLQ8IV45 518 aa30.55■■■□□ 2.48
PTPN18-205ENST00000428843 CAMTA1Q9Y6Y1 1673 aa30.54■■■□□ 2.48
PTPN18-205ENST00000428843 POTEAQ6S8J7 498 aa30.53■■■□□ 2.48
PTPN18-205ENST00000428843 RGPD5Q99666 1765 aa30.52■■■□□ 2.48
PTPN18-205ENST00000428843 DDX10Q13206 875 aaKnown RBP30.51■■■□□ 2.47
PTPN18-205ENST00000428843 QTRT2Q9H974 415 aaKnown RBP30.51■■■□□ 2.47
PTPN18-205ENST00000428843 ATRNO75882 1429 aa30.5■■■□□ 2.47
PTPN18-205ENST00000428843 ABCC6O95255 1503 aa30.5■■■□□ 2.47
PTPN18-205ENST00000428843 MAP3K19Q56UN5 1328 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms