RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 ACEP12821 1306 aa18.73■□□□□ 0.59
PHF1-205ENST00000428274 SLIT2O94813 1529 aa18.72■□□□□ 0.59
PHF1-205ENST00000428274 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
PHF1-205ENST00000428274 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.71■□□□□ 0.59
PHF1-205ENST00000428274 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
PHF1-205ENST00000428274 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
PHF1-205ENST00000428274 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
PHF1-205ENST00000428274 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
PHF1-205ENST00000428274 EVC2Q86UK5 1308 aa18.7■□□□□ 0.58
PHF1-205ENST00000428274 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
PHF1-205ENST00000428274 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
PHF1-205ENST00000428274 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
PHF1-205ENST00000428274 PCGF6Q9BYE7 350 aa18.68■□□□□ 0.58
PHF1-205ENST00000428274 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
PHF1-205ENST00000428274 CABP1Q9NZU7 370 aa18.67■□□□□ 0.58
PHF1-205ENST00000428274 EP400Q96L91 3159 aa18.67■□□□□ 0.58
PHF1-205ENST00000428274 PLCH1Q4KWH8 1693 aa18.66■□□□□ 0.58
PHF1-205ENST00000428274 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
PHF1-205ENST00000428274 GLI3P10071 1580 aa18.64■□□□□ 0.58
PHF1-205ENST00000428274 BRD4O60885 1362 aaPredicted RBP18.64■□□□□ 0.57
PHF1-205ENST00000428274 VPS72Q15906 364 aa18.63■□□□□ 0.57
PHF1-205ENST00000428274 ATAD2Q6PL18 1390 aa18.63■□□□□ 0.57
PHF1-205ENST00000428274 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
PHF1-205ENST00000428274 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
PHF1-205ENST00000428274 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
PHF1-205ENST00000428274 USP6P35125 1406 aa18.61■□□□□ 0.57
PHF1-205ENST00000428274 SSH2Q76I76 1423 aa18.61■□□□□ 0.57
PHF1-205ENST00000428274 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
PHF1-205ENST00000428274 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
PHF1-205ENST00000428274 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
PHF1-205ENST00000428274 AKAP12Q02952 1782 aa18.6■□□□□ 0.57
PHF1-205ENST00000428274 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
PHF1-205ENST00000428274 USP19O94966 1318 aa18.59■□□□□ 0.57
PHF1-205ENST00000428274 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
PHF1-205ENST00000428274 CCDC9Q9Y3X0 531 aaKnown RBP18.59■□□□□ 0.57
PHF1-205ENST00000428274 ONECUT3O60422 494 aaPredicted RBP18.58■□□□□ 0.56
PHF1-205ENST00000428274 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
PHF1-205ENST00000428274 TESK2Q96S53 571 aa18.57■□□□□ 0.56
PHF1-205ENST00000428274 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
PHF1-205ENST00000428274 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
PHF1-205ENST00000428274 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
PHF1-205ENST00000428274 CHRNA2Q15822 529 aa18.56■□□□□ 0.56
PHF1-205ENST00000428274 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
PHF1-205ENST00000428274 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
PHF1-205ENST00000428274 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
PHF1-205ENST00000428274 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
PHF1-205ENST00000428274 ZC3H6P61129 1189 aaKnown RBP18.54■□□□□ 0.56
PHF1-205ENST00000428274 FAM98CQ17RN3 349 aaKnown RBP18.54■□□□□ 0.56
PHF1-205ENST00000428274 CPDO75976 1380 aa18.54■□□□□ 0.56
PHF1-205ENST00000428274 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
PHF1-205ENST00000428274 GCP02774 474 aa18.53■□□□□ 0.56
PHF1-205ENST00000428274 BRWD3Q6RI45 1802 aa18.53■□□□□ 0.56
PHF1-205ENST00000428274 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.56
PHF1-205ENST00000428274 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
PHF1-205ENST00000428274 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
PHF1-205ENST00000428274 NLRP6P59044 892 aa18.52■□□□□ 0.56
PHF1-205ENST00000428274 DEFB132Q7Z7B7 95 aa18.52■□□□□ 0.56
PHF1-205ENST00000428274 SLIT3O75094 1523 aa18.51■□□□□ 0.55
PHF1-205ENST00000428274 SLC24A1O60721 1099 aa18.51■□□□□ 0.55
PHF1-205ENST00000428274 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
PHF1-205ENST00000428274 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 FAM182BQ5T319 152 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 USP47Q96K76 1375 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
PHF1-205ENST00000428274 TTC21AQ8NDW8 1320 aa18.49■□□□□ 0.55
PHF1-205ENST00000428274 KRT27Q7Z3Y8 459 aa18.49■□□□□ 0.55
PHF1-205ENST00000428274 CAMTA1Q9Y6Y1 1673 aa18.49■□□□□ 0.55
PHF1-205ENST00000428274 CCDC125Q86Z20 511 aa18.48■□□□□ 0.55
PHF1-205ENST00000428274 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
PHF1-205ENST00000428274 A0A0G2JS52 829 aa18.47■□□□□ 0.55
PHF1-205ENST00000428274 MYT1Q01538 1121 aa18.47■□□□□ 0.55
PHF1-205ENST00000428274 TMC1Q8TDI8 760 aa18.47■□□□□ 0.55
PHF1-205ENST00000428274 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
PHF1-205ENST00000428274 BLMP54132 1417 aaPredicted RBP18.46■□□□□ 0.55
PHF1-205ENST00000428274 SPATA31A1Q5TZJ5 1347 aa18.46■□□□□ 0.55
PHF1-205ENST00000428274 SRCAPQ6ZRS2 3230 aa18.45■□□□□ 0.54
PHF1-205ENST00000428274 COL18A1P39060 1754 aa18.45■□□□□ 0.54
PHF1-205ENST00000428274 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
PHF1-205ENST00000428274 USP31Q70CQ4 1352 aa18.44■□□□□ 0.54
PHF1-205ENST00000428274 NINLQ9Y2I6 1382 aa18.44■□□□□ 0.54
PHF1-205ENST00000428274 HDGFL2Q7Z4V5 671 aaPredicted RBP18.44■□□□□ 0.54
PHF1-205ENST00000428274 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
PHF1-205ENST00000428274 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
PHF1-205ENST00000428274 AATKQ6ZMQ8 1374 aa18.43■□□□□ 0.54
PHF1-205ENST00000428274 EDC4Q6P2E9 1401 aaKnown RBP18.43■□□□□ 0.54
PHF1-205ENST00000428274 THSD7AQ9UPZ6 1657 aa18.43■□□□□ 0.54
PHF1-205ENST00000428274 TMF1P82094 1093 aa18.42■□□□□ 0.54
PHF1-205ENST00000428274 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
PHF1-205ENST00000428274 ARHGEF25Q86VW2 580 aa18.42■□□□□ 0.54
PHF1-205ENST00000428274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
PHF1-205ENST00000428274 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
PHF1-205ENST00000428274 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
PHF1-205ENST00000428274 NFAT5O94916 1531 aa18.41■□□□□ 0.54
PHF1-205ENST00000428274 EVA1CP58658 441 aa18.41■□□□□ 0.54
PHF1-205ENST00000428274 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
PHF1-205ENST00000428274 ZRANB1Q9UGI0 708 aa18.41■□□□□ 0.54
PHF1-205ENST00000428274 NME9Q86XW9 330 aa18.4■□□□□ 0.54
PHF1-205ENST00000428274 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms