RNA–Protein interactions for RNA: ENST00000428253.1

MMP11-202, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 537 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-202ENST00000428253 TMC1Q8TDI8 760 aa24.99■■□□□ 1.59
MMP11-202ENST00000428253 CRYBG1Q9Y4K1 1723 aa24.98■■□□□ 1.59
MMP11-202ENST00000428253 NUTM2BA6NNL0 878 aaPredicted RBP24.98■■□□□ 1.59
MMP11-202ENST00000428253 NUTM2EB1AL46 878 aaPredicted RBP24.98■■□□□ 1.59
MMP11-202ENST00000428253 PAK3O75914 559 aaPredicted RBP24.98■■□□□ 1.59
MMP11-202ENST00000428253 NUTM2AQ8IVF1 878 aaPredicted RBP24.98■■□□□ 1.59
MMP11-202ENST00000428253 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
MMP11-202ENST00000428253 A0A1W2PP64 1363 aa24.97■■□□□ 1.59
MMP11-202ENST00000428253 C11orf95C9JLR9 678 aaPredicted RBP24.97■■□□□ 1.59
MMP11-202ENST00000428253 MYOM1P52179 1685 aa24.97■■□□□ 1.59
MMP11-202ENST00000428253 KTN1Q86UP2 1357 aaKnown RBP24.96■■□□□ 1.59
MMP11-202ENST00000428253 LMOD2Q6P5Q4 547 aa24.96■■□□□ 1.59
MMP11-202ENST00000428253 TTC21BQ7Z4L5 1316 aa24.95■■□□□ 1.58
MMP11-202ENST00000428253 TERF2IPQ9NYB0 399 aa24.95■■□□□ 1.58
MMP11-202ENST00000428253 CABLES1Q8TDN4 633 aa24.94■■□□□ 1.58
MMP11-202ENST00000428253 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
MMP11-202ENST00000428253 HDGFL2Q7Z4V5 671 aaPredicted RBP24.93■■□□□ 1.58
MMP11-202ENST00000428253 RGS17Q9UGC6 210 aaPredicted RBP24.93■■□□□ 1.58
MMP11-202ENST00000428253 PIK3C2AO00443 1686 aa24.93■■□□□ 1.58
MMP11-202ENST00000428253 MARF1Q9Y4F3 1742 aaKnown RBP24.92■■□□□ 1.58
MMP11-202ENST00000428253 TTC21AQ8NDW8 1320 aa24.92■■□□□ 1.58
MMP11-202ENST00000428253 ABTB2Q8N961 1025 aa24.92■■□□□ 1.58
MMP11-202ENST00000428253 USP19O94966 1318 aa24.91■■□□□ 1.58
MMP11-202ENST00000428253 EDC4Q6P2E9 1401 aaKnown RBP24.91■■□□□ 1.58
MMP11-202ENST00000428253 ADAMTS2O95450 1211 aa24.9■■□□□ 1.58
MMP11-202ENST00000428253 NUTM2GQ5VZR2 741 aa24.89■■□□□ 1.58
MMP11-202ENST00000428253 PHRF1Q9P1Y6 1649 aaKnown RBP24.88■■□□□ 1.57
MMP11-202ENST00000428253 MEX3CQ5U5Q3 659 aaKnown RBP24.87■■□□□ 1.57
MMP11-202ENST00000428253 NLRP13Q86W25 1043 aa24.87■■□□□ 1.57
MMP11-202ENST00000428253 USP54Q70EL1 1684 aa24.86■■□□□ 1.57
MMP11-202ENST00000428253 USP31Q70CQ4 1352 aa24.86■■□□□ 1.57
MMP11-202ENST00000428253 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
MMP11-202ENST00000428253 SLIT3O75094 1523 aa24.86■■□□□ 1.57
MMP11-202ENST00000428253 KIF7Q2M1P5 1343 aa24.86■■□□□ 1.57
MMP11-202ENST00000428253 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
MMP11-202ENST00000428253 C8orf37Q96NL8 207 aa24.85■■□□□ 1.57
MMP11-202ENST00000428253 NLRP6P59044 892 aa24.84■■□□□ 1.57
MMP11-202ENST00000428253 CARD14Q9BXL6 1004 aa24.84■■□□□ 1.57
MMP11-202ENST00000428253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.83■■□□□ 1.57
MMP11-202ENST00000428253 PHF23Q9BUL5 403 aaPredicted RBP24.83■■□□□ 1.57
MMP11-202ENST00000428253 AFF2P51816 1311 aa24.83■■□□□ 1.56
MMP11-202ENST00000428253 PLEKHG5O94827 1062 aa24.82■■□□□ 1.56
MMP11-202ENST00000428253 NME9Q86XW9 330 aa24.82■■□□□ 1.56
MMP11-202ENST00000428253 SLIT2O94813 1529 aa24.81■■□□□ 1.56
MMP11-202ENST00000428253 GCP02774 474 aa24.81■■□□□ 1.56
MMP11-202ENST00000428253 HAP1P54257 671 aaPredicted RBP24.81■■□□□ 1.56
MMP11-202ENST00000428253 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
MMP11-202ENST00000428253 ZRANB1Q9UGI0 708 aa24.81■■□□□ 1.56
MMP11-202ENST00000428253 FAM83GA6ND36 823 aa24.8■■□□□ 1.56
MMP11-202ENST00000428253 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
MMP11-202ENST00000428253 BCL9LQ86UU0 1499 aa24.79■■□□□ 1.56
MMP11-202ENST00000428253 CPDO75976 1380 aa24.79■■□□□ 1.56
MMP11-202ENST00000428253 CCDC7Q96M83 1385 aa24.79■■□□□ 1.56
MMP11-202ENST00000428253 OVOS2A0A0J9YW53 1432 aa24.78■■□□□ 1.56
MMP11-202ENST00000428253 OVOS2Q6IE36 1432 aa24.78■■□□□ 1.56
MMP11-202ENST00000428253 POTEAQ6S8J7 498 aa24.78■■□□□ 1.56
MMP11-202ENST00000428253 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
MMP11-202ENST00000428253 ZNF772Q68DY9 489 aaPredicted RBP24.77■■□□□ 1.56
MMP11-202ENST00000428253 KIAA0232Q92628 1395 aa24.77■■□□□ 1.56
MMP11-202ENST00000428253 COL14A1Q05707 1796 aaKnown RBP24.76■■□□□ 1.55
MMP11-202ENST00000428253 FYB1O15117 783 aa24.76■■□□□ 1.55
MMP11-202ENST00000428253 NFAT5O94916 1531 aa24.76■■□□□ 1.55
MMP11-202ENST00000428253 PLCH1Q4KWH8 1693 aa24.75■■□□□ 1.55
MMP11-202ENST00000428253 NSD3Q9BZ95 1437 aa24.75■■□□□ 1.55
MMP11-202ENST00000428253 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.75■■□□□ 1.55
MMP11-202ENST00000428253 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
MMP11-202ENST00000428253 ZC3H6P61129 1189 aaKnown RBP24.74■■□□□ 1.55
MMP11-202ENST00000428253 PANK3Q9H999 370 aa24.74■■□□□ 1.55
MMP11-202ENST00000428253 KCNH5Q8NCM2 988 aa24.73■■□□□ 1.55
MMP11-202ENST00000428253 USP21Q9UK80 565 aa24.73■■□□□ 1.55
MMP11-202ENST00000428253 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
MMP11-202ENST00000428253 LMO7Q8WWI1 1683 aa24.72■■□□□ 1.55
MMP11-202ENST00000428253 KIF20BQ96Q89 1820 aa24.71■■□□□ 1.55
MMP11-202ENST00000428253 UNC5CLQ8IV45 518 aa24.71■■□□□ 1.55
MMP11-202ENST00000428253 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
MMP11-202ENST00000428253 ATRNO75882 1429 aa24.7■■□□□ 1.55
MMP11-202ENST00000428253 ARHGEF25Q86VW2 580 aa24.7■■□□□ 1.54
MMP11-202ENST00000428253 COL18A1P39060 1754 aa24.7■■□□□ 1.54
MMP11-202ENST00000428253 CHRNA2Q15822 529 aa24.69■■□□□ 1.54
MMP11-202ENST00000428253 GGNBP2Q9H3C7 697 aa24.68■■□□□ 1.54
MMP11-202ENST00000428253 QTRT2Q9H974 415 aaKnown RBP24.68■■□□□ 1.54
MMP11-202ENST00000428253 AATKQ6ZMQ8 1374 aa24.67■■□□□ 1.54
MMP11-202ENST00000428253 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
MMP11-202ENST00000428253 COG3Q96JB2 828 aa24.67■■□□□ 1.54
MMP11-202ENST00000428253 BTG4Q9NY30 223 aa24.67■■□□□ 1.54
MMP11-202ENST00000428253 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
MMP11-202ENST00000428253 ILDR2Q71H61 639 aa24.66■■□□□ 1.54
MMP11-202ENST00000428253 TRPC5Q9UL62 973 aaPredicted RBP24.66■■□□□ 1.54
MMP11-202ENST00000428253 PER1O15534 1290 aaPredicted RBP24.65■■□□□ 1.54
MMP11-202ENST00000428253 ABCC6O95255 1503 aa24.63■■□□□ 1.53
MMP11-202ENST00000428253 SOX12O15370 315 aa24.63■■□□□ 1.53
MMP11-202ENST00000428253 VPS72Q15906 364 aa24.63■■□□□ 1.53
MMP11-202ENST00000428253 RBM6P78332 1123 aaKnown RBP24.61■■□□□ 1.53
MMP11-202ENST00000428253 AXIN2Q9Y2T1 843 aa24.61■■□□□ 1.53
MMP11-202ENST00000428253 ANKRD26Q9UPS8 1709 aa24.61■■□□□ 1.53
MMP11-202ENST00000428253 LTN1O94822 1766 aa24.6■■□□□ 1.53
MMP11-202ENST00000428253 RXRBP28702 533 aa24.6■■□□□ 1.53
MMP11-202ENST00000428253 GJD4Q96KN9 370 aaPredicted RBP24.6■■□□□ 1.53
MMP11-202ENST00000428253 GLI3P10071 1580 aa24.59■■□□□ 1.53
MMP11-202ENST00000428253 COL5A2P05997 1499 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms