RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 PXDNQ92626 1479 aa12.76□□□□□ -0.37
LINC00963-204ENST00000427778 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
LINC00963-204ENST00000427778 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
LINC00963-204ENST00000427778 LHX8Q68G74 356 aa12.75□□□□□ -0.37
LINC00963-204ENST00000427778 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
LINC00963-204ENST00000427778 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
LINC00963-204ENST00000427778 GLI3P10071 1580 aa12.74□□□□□ -0.37
LINC00963-204ENST00000427778 TULP4Q9NRJ4 1543 aa12.74□□□□□ -0.37
LINC00963-204ENST00000427778 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
LINC00963-204ENST00000427778 GABBR2O75899 941 aa12.74□□□□□ -0.37
LINC00963-204ENST00000427778 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
LINC00963-204ENST00000427778 NPHP3Q7Z494 1330 aa12.73□□□□□ -0.37
LINC00963-204ENST00000427778 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
LINC00963-204ENST00000427778 POGKQ9P215 609 aa12.73□□□□□ -0.37
LINC00963-204ENST00000427778 TRAK1Q9UPV9 953 aa12.73□□□□□ -0.37
LINC00963-204ENST00000427778 TOPAZ1Q8N9V7 1692 aa12.72□□□□□ -0.37
LINC00963-204ENST00000427778 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
LINC00963-204ENST00000427778 ESCO1Q5FWF5 840 aa12.71□□□□□ -0.37
LINC00963-204ENST00000427778 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
LINC00963-204ENST00000427778 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.38
LINC00963-204ENST00000427778 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.38
LINC00963-204ENST00000427778 PLCH1Q4KWH8 1693 aa12.7□□□□□ -0.38
LINC00963-204ENST00000427778 GPRASP1Q5JY77 1395 aa12.7□□□□□ -0.38
LINC00963-204ENST00000427778 SAFB2Q14151 953 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00963-204ENST00000427778 NBPF1Q3BBV0 1214 aa12.7□□□□□ -0.38
LINC00963-204ENST00000427778 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
LINC00963-204ENST00000427778 ATP7BP35670 1465 aa12.7□□□□□ -0.38
LINC00963-204ENST00000427778 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
LINC00963-204ENST00000427778 NEUROD1Q13562 356 aa12.69□□□□□ -0.38
LINC00963-204ENST00000427778 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
LINC00963-204ENST00000427778 RALGAPBQ86X10 1494 aa12.68□□□□□ -0.38
LINC00963-204ENST00000427778 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
LINC00963-204ENST00000427778 MINK1Q8N4C8 1332 aaPredicted RBP12.67□□□□□ -0.38
LINC00963-204ENST00000427778 FOXO3O43524 673 aa12.67□□□□□ -0.38
LINC00963-204ENST00000427778 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
LINC00963-204ENST00000427778 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
LINC00963-204ENST00000427778 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
LINC00963-204ENST00000427778 ALS2Q96Q42 1657 aa12.67□□□□□ -0.38
LINC00963-204ENST00000427778 PRR36Q9H6K5 1346 aa12.66□□□□□ -0.38
LINC00963-204ENST00000427778 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
LINC00963-204ENST00000427778 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
LINC00963-204ENST00000427778 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
LINC00963-204ENST00000427778 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
LINC00963-204ENST00000427778 SBNO1A3KN83 1393 aa12.66□□□□□ -0.38
LINC00963-204ENST00000427778 ROCK2O75116 1388 aaKnown RBP12.66□□□□□ -0.38
LINC00963-204ENST00000427778 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
LINC00963-204ENST00000427778 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-204ENST00000427778 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
LINC00963-204ENST00000427778 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
LINC00963-204ENST00000427778 GJD4Q96KN9 370 aaPredicted RBP12.65□□□□□ -0.38
LINC00963-204ENST00000427778 SPATA31A3Q5VYP0 1347 aa12.64□□□□□ -0.39
LINC00963-204ENST00000427778 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
LINC00963-204ENST00000427778 SBNO2Q9Y2G9 1366 aa12.64□□□□□ -0.39
LINC00963-204ENST00000427778 SLIT2O94813 1529 aa12.63□□□□□ -0.39
LINC00963-204ENST00000427778 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
LINC00963-204ENST00000427778 ZBTB22O15209 634 aa12.63□□□□□ -0.39
LINC00963-204ENST00000427778 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
LINC00963-204ENST00000427778 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-204ENST00000427778 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
LINC00963-204ENST00000427778 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-204ENST00000427778 KRT28Q7Z3Y7 464 aa12.62□□□□□ -0.39
LINC00963-204ENST00000427778 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-204ENST00000427778 PSME1Q06323 249 aa12.61□□□□□ -0.39
LINC00963-204ENST00000427778 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
LINC00963-204ENST00000427778 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
LINC00963-204ENST00000427778 NRAPQ86VF7 1730 aa12.6□□□□□ -0.39
LINC00963-204ENST00000427778 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
LINC00963-204ENST00000427778 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
LINC00963-204ENST00000427778 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
LINC00963-204ENST00000427778 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
LINC00963-204ENST00000427778 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
LINC00963-204ENST00000427778 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
LINC00963-204ENST00000427778 PMFBP1Q8TBY8 1022 aa12.58□□□□□ -0.4
LINC00963-204ENST00000427778 AKAP12Q02952 1782 aa12.58□□□□□ -0.4
LINC00963-204ENST00000427778 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
LINC00963-204ENST00000427778 RREB1Q92766 1687 aa12.57□□□□□ -0.4
LINC00963-204ENST00000427778 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
LINC00963-204ENST00000427778 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-204ENST00000427778 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
LINC00963-204ENST00000427778 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
LINC00963-204ENST00000427778 BAG6P46379 1132 aa12.56□□□□□ -0.4
LINC00963-204ENST00000427778 NGDNQ8NEJ9 315 aaKnown RBP12.56□□□□□ -0.4
LINC00963-204ENST00000427778 CARD11Q9BXL7 1154 aa12.56□□□□□ -0.4
LINC00963-204ENST00000427778 YY1P25490 414 aa12.55□□□□□ -0.4
LINC00963-204ENST00000427778 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
LINC00963-204ENST00000427778 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
LINC00963-204ENST00000427778 ACEP12821 1306 aa12.55□□□□□ -0.4
LINC00963-204ENST00000427778 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
LINC00963-204ENST00000427778 MKRN4PQ13434 485 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-204ENST00000427778 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
LINC00963-204ENST00000427778 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
LINC00963-204ENST00000427778 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
LINC00963-204ENST00000427778 USP6P35125 1406 aa12.53□□□□□ -0.4
LINC00963-204ENST00000427778 CAMTA1Q9Y6Y1 1673 aa12.52□□□□□ -0.4
LINC00963-204ENST00000427778 KRT27Q7Z3Y8 459 aa12.52□□□□□ -0.41
LINC00963-204ENST00000427778 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
LINC00963-204ENST00000427778 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
LINC00963-204ENST00000427778 PUS7Q96PZ0 661 aaKnown RBP12.51□□□□□ -0.41
LINC00963-204ENST00000427778 DISP2A7MBM2 1401 aa12.51□□□□□ -0.41
LINC00963-204ENST00000427778 PIK3C2AO00443 1686 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms