RNA–Protein interactions for RNA: ENST00000427739.1

PRDM6-202, Transcript of PR/SET domain 6, humanhuman

TSL 3

Gene PRDM6, Length 256 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-202ENST00000427739 USP21Q9UK80 565 aa8.48□□□□□ -1.05
PRDM6-202ENST00000427739 RALGAPBQ86X10 1494 aa8.48□□□□□ -1.05
PRDM6-202ENST00000427739 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
PRDM6-202ENST00000427739 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
PRDM6-202ENST00000427739 NUTM2GQ5VZR2 741 aa8.47□□□□□ -1.05
PRDM6-202ENST00000427739 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
PRDM6-202ENST00000427739 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.05
PRDM6-202ENST00000427739 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
PRDM6-202ENST00000427739 DEFB132Q7Z7B7 95 aa8.46□□□□□ -1.06
PRDM6-202ENST00000427739 CCDC9Q9Y3X0 531 aaKnown RBP8.46□□□□□ -1.06
PRDM6-202ENST00000427739 ALS2Q96Q42 1657 aa8.46□□□□□ -1.06
PRDM6-202ENST00000427739 ATRNO75882 1429 aa8.46□□□□□ -1.06
PRDM6-202ENST00000427739 BCL9LQ86UU0 1499 aa8.45□□□□□ -1.06
PRDM6-202ENST00000427739 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
PRDM6-202ENST00000427739 SF3B2Q13435 895 aaKnown RBP8.45□□□□□ -1.06
PRDM6-202ENST00000427739 FNBP4Q8N3X1 1017 aaPredicted RBP8.45□□□□□ -1.06
PRDM6-202ENST00000427739 SENP3-EIF4A1A0A087X0R7 540 aa8.44□□□□□ -1.06
PRDM6-202ENST00000427739 A0A0G2JS52 829 aa8.44□□□□□ -1.06
PRDM6-202ENST00000427739 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
PRDM6-202ENST00000427739 MYT1Q01538 1121 aa8.44□□□□□ -1.06
PRDM6-202ENST00000427739 ACEP12821 1306 aa8.44□□□□□ -1.06
PRDM6-202ENST00000427739 EVC2Q86UK5 1308 aa8.44□□□□□ -1.06
PRDM6-202ENST00000427739 PHRF1Q9P1Y6 1649 aaKnown RBP8.43□□□□□ -1.06
PRDM6-202ENST00000427739 CCDC61Q9Y6R9 512 aa8.43□□□□□ -1.06
PRDM6-202ENST00000427739 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
PRDM6-202ENST00000427739 SLIT2O94813 1529 aa8.42□□□□□ -1.06
PRDM6-202ENST00000427739 NRKQ7Z2Y5 1582 aa8.42□□□□□ -1.06
PRDM6-202ENST00000427739 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.42□□□□□ -1.06
PRDM6-202ENST00000427739 CRYBG1Q9Y4K1 1723 aa8.42□□□□□ -1.06
PRDM6-202ENST00000427739 GLI3P10071 1580 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 USP6P35125 1406 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 POLR3AO14802 1390 aaPredicted RBP8.41□□□□□ -1.06
PRDM6-202ENST00000427739 KIAA0232Q92628 1395 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 SOX12O15370 315 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 CHRNA2Q15822 529 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 UNC5CLQ8IV45 518 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 CCER1Q8TC90 406 aaPredicted RBP8.41□□□□□ -1.06
PRDM6-202ENST00000427739 CABP1Q9NZU7 370 aa8.41□□□□□ -1.06
PRDM6-202ENST00000427739 COL14A1Q05707 1796 aaKnown RBP8.4□□□□□ -1.06
PRDM6-202ENST00000427739 NRAPQ86VF7 1730 aa8.4□□□□□ -1.06
PRDM6-202ENST00000427739 NWD2Q9ULI1 1742 aa8.4□□□□□ -1.06
PRDM6-202ENST00000427739 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
PRDM6-202ENST00000427739 ABTB2Q8N961 1025 aa8.4□□□□□ -1.06
PRDM6-202ENST00000427739 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
PRDM6-202ENST00000427739 GJD4Q96KN9 370 aaPredicted RBP8.4□□□□□ -1.06
PRDM6-202ENST00000427739 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
PRDM6-202ENST00000427739 USP47Q96K76 1375 aa8.39□□□□□ -1.07
PRDM6-202ENST00000427739 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
PRDM6-202ENST00000427739 BTG4Q9NY30 223 aa8.39□□□□□ -1.07
PRDM6-202ENST00000427739 PIK3C2AO00443 1686 aa8.39□□□□□ -1.07
PRDM6-202ENST00000427739 AKAP12Q02952 1782 aa8.38□□□□□ -1.07
PRDM6-202ENST00000427739 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
PRDM6-202ENST00000427739 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
PRDM6-202ENST00000427739 BAG6P46379 1132 aa8.38□□□□□ -1.07
PRDM6-202ENST00000427739 KTN1Q86UP2 1357 aaKnown RBP8.37□□□□□ -1.07
PRDM6-202ENST00000427739 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
PRDM6-202ENST00000427739 NLRP6P59044 892 aa8.37□□□□□ -1.07
PRDM6-202ENST00000427739 C1QTNF8P60827 252 aa8.37□□□□□ -1.07
PRDM6-202ENST00000427739 FAM98CQ17RN3 349 aaKnown RBP8.37□□□□□ -1.07
PRDM6-202ENST00000427739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.37□□□□□ -1.07
PRDM6-202ENST00000427739 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
PRDM6-202ENST00000427739 USP19O94966 1318 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 R3HDM1Q15032 1099 aaKnown RBP8.36□□□□□ -1.07
PRDM6-202ENST00000427739 VPS72Q15906 364 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
PRDM6-202ENST00000427739 POLR3GLQ9BT43 218 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 USP35Q9P2H5 1018 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 BRWD3Q6RI45 1802 aa8.36□□□□□ -1.07
PRDM6-202ENST00000427739 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
PRDM6-202ENST00000427739 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
PRDM6-202ENST00000427739 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
PRDM6-202ENST00000427739 A0A1W2PP64 1363 aa8.35□□□□□ -1.07
PRDM6-202ENST00000427739 SLIT3O75094 1523 aa8.34□□□□□ -1.07
PRDM6-202ENST00000427739 HDGFL2Q7Z4V5 671 aaPredicted RBP8.34□□□□□ -1.07
PRDM6-202ENST00000427739 NME9Q86XW9 330 aa8.34□□□□□ -1.07
PRDM6-202ENST00000427739 CD163L1Q9NR16 1453 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 GCP02774 474 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 EVA1CP58658 441 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
PRDM6-202ENST00000427739 TESK2Q96S53 571 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 SLC12A5Q9H2X9 1139 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 LMO7Q8WWI1 1683 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 CAMTA1Q9Y6Y1 1673 aa8.33□□□□□ -1.08
PRDM6-202ENST00000427739 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
PRDM6-202ENST00000427739 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
PRDM6-202ENST00000427739 SPATA31A5Q5VU36 1347 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 SPATA31A7Q8IWB4 1347 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 TTC21AQ8NDW8 1320 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 CLSPNQ9HAW4 1339 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 FAM182BQ5T319 152 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 LARP1Q6PKG0 1096 aaKnown RBP8.32□□□□□ -1.08
PRDM6-202ENST00000427739 NFAT5O94916 1531 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 CPDO75976 1380 aa8.32□□□□□ -1.08
PRDM6-202ENST00000427739 THSD7AQ9UPZ6 1657 aa8.31□□□□□ -1.08
PRDM6-202ENST00000427739 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
PRDM6-202ENST00000427739 TMF1P82094 1093 aa8.31□□□□□ -1.08
PRDM6-202ENST00000427739 EN1Q05925 392 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms