RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ITSN1Q15811 1721 aa18.28■□□□□ 0.52
APOBEC3D-202ENST00000427494 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
APOBEC3D-202ENST00000427494 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
APOBEC3D-202ENST00000427494 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
APOBEC3D-202ENST00000427494 AKAP12Q02952 1782 aa18.26■□□□□ 0.51
APOBEC3D-202ENST00000427494 SLIT1O75093 1534 aa18.26■□□□□ 0.51
APOBEC3D-202ENST00000427494 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
APOBEC3D-202ENST00000427494 ARHGAP23Q9P227 1491 aa18.25■□□□□ 0.51
APOBEC3D-202ENST00000427494 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
APOBEC3D-202ENST00000427494 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
APOBEC3D-202ENST00000427494 PNPLA6Q8IY17 1366 aa18.24■□□□□ 0.51
APOBEC3D-202ENST00000427494 DIAPH1O60610 1272 aaKnown RBP18.24■□□□□ 0.51
APOBEC3D-202ENST00000427494 CCDC61Q9Y6R9 512 aa18.24■□□□□ 0.51
APOBEC3D-202ENST00000427494 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
APOBEC3D-202ENST00000427494 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
APOBEC3D-202ENST00000427494 BCAR3O75815 825 aa18.23■□□□□ 0.51
APOBEC3D-202ENST00000427494 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
APOBEC3D-202ENST00000427494 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
APOBEC3D-202ENST00000427494 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
APOBEC3D-202ENST00000427494 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
APOBEC3D-202ENST00000427494 NME9Q86XW9 330 aa18.21■□□□□ 0.51
APOBEC3D-202ENST00000427494 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
APOBEC3D-202ENST00000427494 TOPAZ1Q8N9V7 1692 aa18.2■□□□□ 0.5
APOBEC3D-202ENST00000427494 PPM1GO15355 546 aaPredicted RBP18.2■□□□□ 0.5
APOBEC3D-202ENST00000427494 POLKQ9UBT6 870 aa18.2■□□□□ 0.5
APOBEC3D-202ENST00000427494 FANCIQ9NVI1 1328 aa18.2■□□□□ 0.5
APOBEC3D-202ENST00000427494 FBLN1P23142 703 aa18.19■□□□□ 0.5
APOBEC3D-202ENST00000427494 THEMISQ8N1K5 641 aaPredicted RBP18.19■□□□□ 0.5
APOBEC3D-202ENST00000427494 DIP2AQ14689 1571 aa18.18■□□□□ 0.5
APOBEC3D-202ENST00000427494 TMPOP42166 694 aaKnown RBP18.18■□□□□ 0.5
APOBEC3D-202ENST00000427494 MYH16Q9H6N6 1097 aa18.18■□□□□ 0.5
APOBEC3D-202ENST00000427494 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
APOBEC3D-202ENST00000427494 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
APOBEC3D-202ENST00000427494 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
APOBEC3D-202ENST00000427494 COG3Q96JB2 828 aa18.17■□□□□ 0.5
APOBEC3D-202ENST00000427494 ZNF692Q9BU19 519 aaPredicted RBP18.17■□□□□ 0.5
APOBEC3D-202ENST00000427494 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
APOBEC3D-202ENST00000427494 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
APOBEC3D-202ENST00000427494 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
APOBEC3D-202ENST00000427494 AMOTL2Q9Y2J4 779 aa18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 CDK12Q9NYV4 1490 aaPredicted RBP18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
APOBEC3D-202ENST00000427494 PTCH1Q13635 1447 aa18.14■□□□□ 0.49
APOBEC3D-202ENST00000427494 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.49
APOBEC3D-202ENST00000427494 TRIM35Q9UPQ4 493 aa18.14■□□□□ 0.49
APOBEC3D-202ENST00000427494 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
APOBEC3D-202ENST00000427494 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
APOBEC3D-202ENST00000427494 FCHSD2O94868 740 aa18.13■□□□□ 0.49
APOBEC3D-202ENST00000427494 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
APOBEC3D-202ENST00000427494 RIPK4P57078 832 aa18.12■□□□□ 0.49
APOBEC3D-202ENST00000427494 PDE3AQ14432 1141 aa18.12■□□□□ 0.49
APOBEC3D-202ENST00000427494 RSPH6AQ9H0K4 717 aa18.12■□□□□ 0.49
APOBEC3D-202ENST00000427494 ACEP12821 1306 aa18.12■□□□□ 0.49
APOBEC3D-202ENST00000427494 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
APOBEC3D-202ENST00000427494 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
APOBEC3D-202ENST00000427494 PRKAR2BP31323 418 aa18.11■□□□□ 0.49
APOBEC3D-202ENST00000427494 CENPQQ7L2Z9 268 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3D-202ENST00000427494 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
APOBEC3D-202ENST00000427494 TTC21BQ7Z4L5 1316 aa18.1■□□□□ 0.49
APOBEC3D-202ENST00000427494 NEFMP07197 916 aa18.1■□□□□ 0.49
APOBEC3D-202ENST00000427494 TSR2Q969E8 191 aaKnown RBP18.1■□□□□ 0.49
APOBEC3D-202ENST00000427494 IL16Q14005 1332 aa18.1■□□□□ 0.49
APOBEC3D-202ENST00000427494 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
APOBEC3D-202ENST00000427494 USP6P35125 1406 aa18.09■□□□□ 0.49
APOBEC3D-202ENST00000427494 IL13P35225 146 aa18.09■□□□□ 0.49
APOBEC3D-202ENST00000427494 HMOX1P09601 288 aa18.08■□□□□ 0.49
APOBEC3D-202ENST00000427494 PANK1Q8TE04 598 aa18.08■□□□□ 0.49
APOBEC3D-202ENST00000427494 MS4A1P11836 297 aa18.08■□□□□ 0.48
APOBEC3D-202ENST00000427494 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.48
APOBEC3D-202ENST00000427494 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
APOBEC3D-202ENST00000427494 NALCNQ8IZF0 1738 aa18.07■□□□□ 0.48
APOBEC3D-202ENST00000427494 MSH5O43196 834 aa18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 CT47B1P0C2W7 299 aaPredicted RBP18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 COG6Q9Y2V7 657 aa18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 OVOS2A0A0J9YW53 1432 aa18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 OVOS2Q6IE36 1432 aa18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
APOBEC3D-202ENST00000427494 ZNF142P52746 1687 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3D-202ENST00000427494 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
APOBEC3D-202ENST00000427494 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
APOBEC3D-202ENST00000427494 PMFBP1Q8TBY8 1022 aa18.03■□□□□ 0.48
APOBEC3D-202ENST00000427494 ADAMTSL3P82987 1691 aa18.02■□□□□ 0.48
APOBEC3D-202ENST00000427494 PIK3R4Q99570 1358 aa18.02■□□□□ 0.48
APOBEC3D-202ENST00000427494 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
APOBEC3D-202ENST00000427494 SSH2Q76I76 1423 aa18.02■□□□□ 0.48
APOBEC3D-202ENST00000427494 KCNA6P17658 529 aa18.02■□□□□ 0.47
APOBEC3D-202ENST00000427494 PDE4AP27815 886 aa18.02■□□□□ 0.47
APOBEC3D-202ENST00000427494 TNNQ9UQP3 1299 aa18.02■□□□□ 0.47
APOBEC3D-202ENST00000427494 RLBP1P12271 317 aa18.01■□□□□ 0.47
APOBEC3D-202ENST00000427494 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
APOBEC3D-202ENST00000427494 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
APOBEC3D-202ENST00000427494 SMC4Q9NTJ3 1288 aa18■□□□□ 0.47
APOBEC3D-202ENST00000427494 PEAK1Q9H792 1746 aa18■□□□□ 0.47
APOBEC3D-202ENST00000427494 FMN2Q9NZ56 1722 aa18■□□□□ 0.47
APOBEC3D-202ENST00000427494 NGDNQ8NEJ9 315 aaKnown RBP18■□□□□ 0.47
APOBEC3D-202ENST00000427494 USP31Q70CQ4 1352 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms