RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 PLCH1Q4KWH8 1693 aa14.65□□□□□ -0.06
GACAT3-201ENST00000426539 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
GACAT3-201ENST00000426539 CCDC125Q86Z20 511 aa14.65□□□□□ -0.06
GACAT3-201ENST00000426539 NUDT16Q96DE0 195 aaKnown RBP14.65□□□□□ -0.06
GACAT3-201ENST00000426539 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
GACAT3-201ENST00000426539 NGDNQ8NEJ9 315 aaKnown RBP14.64□□□□□ -0.07
GACAT3-201ENST00000426539 NWD2Q9ULI1 1742 aa14.63□□□□□ -0.07
GACAT3-201ENST00000426539 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
GACAT3-201ENST00000426539 BTG4Q9NY30 223 aa14.63□□□□□ -0.07
GACAT3-201ENST00000426539 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
GACAT3-201ENST00000426539 BLMP54132 1417 aaPredicted RBP14.62□□□□□ -0.07
GACAT3-201ENST00000426539 EP400Q96L91 3159 aa14.61□□□□□ -0.07
GACAT3-201ENST00000426539 NRAPQ86VF7 1730 aa14.61□□□□□ -0.07
GACAT3-201ENST00000426539 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
GACAT3-201ENST00000426539 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
GACAT3-201ENST00000426539 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
GACAT3-201ENST00000426539 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
GACAT3-201ENST00000426539 KRT27Q7Z3Y8 459 aa14.6□□□□□ -0.07
GACAT3-201ENST00000426539 DEFB132Q7Z7B7 95 aa14.6□□□□□ -0.07
GACAT3-201ENST00000426539 KIAA1210Q9ULL0 1709 aa14.59□□□□□ -0.07
GACAT3-201ENST00000426539 FAM98CQ17RN3 349 aaKnown RBP14.59□□□□□ -0.07
GACAT3-201ENST00000426539 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
GACAT3-201ENST00000426539 ACEP12821 1306 aa14.59□□□□□ -0.07
GACAT3-201ENST00000426539 COL14A1Q05707 1796 aaKnown RBP14.58□□□□□ -0.08
GACAT3-201ENST00000426539 PLEKHG3A1L390 1219 aa14.58□□□□□ -0.08
GACAT3-201ENST00000426539 NBPF8Q3BBV2 869 aa14.58□□□□□ -0.08
GACAT3-201ENST00000426539 CCDC61Q9Y6R9 512 aa14.58□□□□□ -0.08
GACAT3-201ENST00000426539 SPATA31A5Q5VU36 1347 aa14.58□□□□□ -0.08
GACAT3-201ENST00000426539 SPATA31A7Q8IWB4 1347 aa14.58□□□□□ -0.08
GACAT3-201ENST00000426539 NUTM2GQ5VZR2 741 aa14.57□□□□□ -0.08
GACAT3-201ENST00000426539 PRDM11Q9NQV5 511 aa14.57□□□□□ -0.08
GACAT3-201ENST00000426539 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
GACAT3-201ENST00000426539 KIAA0232Q92628 1395 aa14.57□□□□□ -0.08
GACAT3-201ENST00000426539 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
GACAT3-201ENST00000426539 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
GACAT3-201ENST00000426539 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
GACAT3-201ENST00000426539 L3MBTL2Q969R5 705 aa14.55□□□□□ -0.08
GACAT3-201ENST00000426539 CENPJQ9HC77 1338 aaPredicted RBP14.55□□□□□ -0.08
GACAT3-201ENST00000426539 A0A0G2JS52 829 aa14.54□□□□□ -0.08
GACAT3-201ENST00000426539 ZC3H6P61129 1189 aaKnown RBP14.54□□□□□ -0.08
GACAT3-201ENST00000426539 MYT1Q01538 1121 aa14.54□□□□□ -0.08
GACAT3-201ENST00000426539 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
GACAT3-201ENST00000426539 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
GACAT3-201ENST00000426539 FAM182BQ5T319 152 aa14.53□□□□□ -0.08
GACAT3-201ENST00000426539 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
GACAT3-201ENST00000426539 THSD7AQ9UPZ6 1657 aa14.52□□□□□ -0.08
GACAT3-201ENST00000426539 PHRF1Q9P1Y6 1649 aaKnown RBP14.52□□□□□ -0.08
GACAT3-201ENST00000426539 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.08
GACAT3-201ENST00000426539 USP19O94966 1318 aa14.52□□□□□ -0.08
GACAT3-201ENST00000426539 SRPK2P78362 688 aaKnown RBP14.52□□□□□ -0.09
GACAT3-201ENST00000426539 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
GACAT3-201ENST00000426539 ABTB2Q8N961 1025 aa14.51□□□□□ -0.09
GACAT3-201ENST00000426539 STRN4Q9NRL3 753 aa14.51□□□□□ -0.09
GACAT3-201ENST00000426539 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
GACAT3-201ENST00000426539 NRKQ7Z2Y5 1582 aa14.5□□□□□ -0.09
GACAT3-201ENST00000426539 CPDO75976 1380 aa14.49□□□□□ -0.09
GACAT3-201ENST00000426539 CABP1Q9NZU7 370 aa14.49□□□□□ -0.09
GACAT3-201ENST00000426539 SRCAPQ6ZRS2 3230 aa14.49□□□□□ -0.09
GACAT3-201ENST00000426539 SSH2Q76I76 1423 aa14.49□□□□□ -0.09
GACAT3-201ENST00000426539 CAMTA1Q9Y6Y1 1673 aa14.49□□□□□ -0.09
GACAT3-201ENST00000426539 QRICH2Q9H0J4 1663 aa14.47□□□□□ -0.09
GACAT3-201ENST00000426539 GCP02774 474 aa14.47□□□□□ -0.09
GACAT3-201ENST00000426539 BAG6P46379 1132 aa14.47□□□□□ -0.09
GACAT3-201ENST00000426539 LARP1Q6PKG0 1096 aaKnown RBP14.47□□□□□ -0.09
GACAT3-201ENST00000426539 NLRP13Q86W25 1043 aa14.47□□□□□ -0.09
GACAT3-201ENST00000426539 USP6P35125 1406 aa14.47□□□□□ -0.09
GACAT3-201ENST00000426539 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
GACAT3-201ENST00000426539 EN1Q05925 392 aaPredicted RBP14.46□□□□□ -0.09
GACAT3-201ENST00000426539 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
GACAT3-201ENST00000426539 BARGINQ6ZT62 677 aa14.46□□□□□ -0.09
GACAT3-201ENST00000426539 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
GACAT3-201ENST00000426539 TRPM1Q7Z4N2 1603 aa14.45□□□□□ -0.1
GACAT3-201ENST00000426539 EVA1CP58658 441 aa14.45□□□□□ -0.1
GACAT3-201ENST00000426539 BRD4O60885 1362 aaPredicted RBP14.45□□□□□ -0.1
GACAT3-201ENST00000426539 DISP2A7MBM2 1401 aa14.44□□□□□ -0.1
GACAT3-201ENST00000426539 PSDA5PKW4 1024 aaPredicted RBP14.44□□□□□ -0.1
GACAT3-201ENST00000426539 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
GACAT3-201ENST00000426539 EVC2Q86UK5 1308 aa14.43□□□□□ -0.1
GACAT3-201ENST00000426539 ZBTB22O15209 634 aa14.43□□□□□ -0.1
GACAT3-201ENST00000426539 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
GACAT3-201ENST00000426539 SLIT3O75094 1523 aa14.42□□□□□ -0.1
GACAT3-201ENST00000426539 TRIM37O94972 964 aa14.42□□□□□ -0.1
GACAT3-201ENST00000426539 NLRP6P59044 892 aa14.42□□□□□ -0.1
GACAT3-201ENST00000426539 FAM196AQ6ZSG2 479 aa14.42□□□□□ -0.1
GACAT3-201ENST00000426539 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
GACAT3-201ENST00000426539 RGPD1P0DJD0 1748 aa14.41□□□□□ -0.1
GACAT3-201ENST00000426539 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
GACAT3-201ENST00000426539 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
GACAT3-201ENST00000426539 CAMKK2Q96RR4 588 aa14.41□□□□□ -0.1
GACAT3-201ENST00000426539 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
GACAT3-201ENST00000426539 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
GACAT3-201ENST00000426539 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
GACAT3-201ENST00000426539 THRAP3Q9Y2W1 955 aaKnown RBP14.39□□□□□ -0.11
GACAT3-201ENST00000426539 PIK3C2AO00443 1686 aa14.39□□□□□ -0.11
GACAT3-201ENST00000426539 PDE3BQ13370 1112 aa14.38□□□□□ -0.11
GACAT3-201ENST00000426539 AXIN2Q9Y2T1 843 aa14.38□□□□□ -0.11
GACAT3-201ENST00000426539 CRB1P82279 1406 aa14.38□□□□□ -0.11
GACAT3-201ENST00000426539 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
GACAT3-201ENST00000426539 APBA3O96018 575 aa14.37□□□□□ -0.11
GACAT3-201ENST00000426539 R3HDM1Q15032 1099 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms