RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 NSD3Q9BZ95 1437 aa22.66■■□□□ 1.22
SAPCD1-209ENST00000425424 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
SAPCD1-209ENST00000425424 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
SAPCD1-209ENST00000425424 CARD14Q9BXL6 1004 aa22.65■■□□□ 1.22
SAPCD1-209ENST00000425424 PER1O15534 1290 aaPredicted RBP22.64■■□□□ 1.21
SAPCD1-209ENST00000425424 PIK3C2AO00443 1686 aa22.64■■□□□ 1.21
SAPCD1-209ENST00000425424 KIF20BQ96Q89 1820 aa22.64■■□□□ 1.21
SAPCD1-209ENST00000425424 NSD2O96028 1365 aa22.63■■□□□ 1.21
SAPCD1-209ENST00000425424 NPC1L1Q9UHC9 1359 aa22.63■■□□□ 1.21
SAPCD1-209ENST00000425424 TTC21BQ7Z4L5 1316 aa22.63■■□□□ 1.21
SAPCD1-209ENST00000425424 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
SAPCD1-209ENST00000425424 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
SAPCD1-209ENST00000425424 ARHGEF10O15013 1369 aa22.62■■□□□ 1.21
SAPCD1-209ENST00000425424 SPATA31A3Q5VYP0 1347 aa22.61■■□□□ 1.21
SAPCD1-209ENST00000425424 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
SAPCD1-209ENST00000425424 FBXO41Q8TF61 875 aa22.61■■□□□ 1.21
SAPCD1-209ENST00000425424 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
SAPCD1-209ENST00000425424 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
SAPCD1-209ENST00000425424 ANKRD26Q9UPS8 1709 aa22.6■■□□□ 1.21
SAPCD1-209ENST00000425424 DDX17Q92841 729 aaKnown RBP22.6■■□□□ 1.21
SAPCD1-209ENST00000425424 USP31Q70CQ4 1352 aa22.6■■□□□ 1.21
SAPCD1-209ENST00000425424 KNSTRNQ9Y448 316 aa22.59■■□□□ 1.21
SAPCD1-209ENST00000425424 LRRC59Q96AG4 307 aaKnown RBP22.58■■□□□ 1.21
SAPCD1-209ENST00000425424 SHPRHQ149N8 1683 aa22.58■■□□□ 1.2
SAPCD1-209ENST00000425424 OVOS2A0A0J9YW53 1432 aa22.57■■□□□ 1.2
SAPCD1-209ENST00000425424 OVOS2Q6IE36 1432 aa22.57■■□□□ 1.2
SAPCD1-209ENST00000425424 XPCQ01831 940 aaPredicted RBP22.57■■□□□ 1.2
SAPCD1-209ENST00000425424 MARF1Q9Y4F3 1742 aaKnown RBP22.57■■□□□ 1.2
SAPCD1-209ENST00000425424 AMER1Q5JTC6 1135 aaPredicted RBP22.56■■□□□ 1.2
SAPCD1-209ENST00000425424 CRYBG1Q9Y4K1 1723 aa22.56■■□□□ 1.2
SAPCD1-209ENST00000425424 SLIT3O75094 1523 aa22.54■■□□□ 1.2
SAPCD1-209ENST00000425424 FYB1O15117 783 aa22.54■■□□□ 1.2
SAPCD1-209ENST00000425424 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
SAPCD1-209ENST00000425424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
SAPCD1-209ENST00000425424 USP19O94966 1318 aa22.53■■□□□ 1.2
SAPCD1-209ENST00000425424 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
SAPCD1-209ENST00000425424 ABCA3Q99758 1704 aa22.52■■□□□ 1.2
SAPCD1-209ENST00000425424 ABTB2Q8N961 1025 aa22.52■■□□□ 1.2
SAPCD1-209ENST00000425424 PHRF1Q9P1Y6 1649 aaKnown RBP22.52■■□□□ 1.2
SAPCD1-209ENST00000425424 JCADQ9P266 1359 aa22.51■■□□□ 1.19
SAPCD1-209ENST00000425424 NME9Q86XW9 330 aa22.51■■□□□ 1.19
SAPCD1-209ENST00000425424 NLRP13Q86W25 1043 aa22.5■■□□□ 1.19
SAPCD1-209ENST00000425424 HSPA1LP34931 641 aa22.49■■□□□ 1.19
SAPCD1-209ENST00000425424 COG3Q96JB2 828 aa22.48■■□□□ 1.19
SAPCD1-209ENST00000425424 NLRP6P59044 892 aa22.47■■□□□ 1.19
SAPCD1-209ENST00000425424 GGNBP2Q9H3C7 697 aa22.46■■□□□ 1.19
SAPCD1-209ENST00000425424 NFAT5O94916 1531 aa22.46■■□□□ 1.19
SAPCD1-209ENST00000425424 PARD3Q8TEW0 1356 aa22.45■■□□□ 1.18
SAPCD1-209ENST00000425424 LMOD2Q6P5Q4 547 aa22.44■■□□□ 1.18
SAPCD1-209ENST00000425424 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
SAPCD1-209ENST00000425424 KCNH5Q8NCM2 988 aa22.44■■□□□ 1.18
SAPCD1-209ENST00000425424 SPATA31A6Q5VVP1 1343 aa22.43■■□□□ 1.18
SAPCD1-209ENST00000425424 ABCC6O95255 1503 aa22.42■■□□□ 1.18
SAPCD1-209ENST00000425424 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
SAPCD1-209ENST00000425424 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
SAPCD1-209ENST00000425424 RALBP1Q15311 655 aa22.4■■□□□ 1.18
SAPCD1-209ENST00000425424 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
SAPCD1-209ENST00000425424 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
SAPCD1-209ENST00000425424 CPDO75976 1380 aa22.39■■□□□ 1.18
SAPCD1-209ENST00000425424 KIF24Q5T7B8 1368 aa22.39■■□□□ 1.18
SAPCD1-209ENST00000425424 GCP02774 474 aa22.39■■□□□ 1.17
SAPCD1-209ENST00000425424 NUTM2GQ5VZR2 741 aa22.39■■□□□ 1.17
SAPCD1-209ENST00000425424 PRKRIP1Q9H875 184 aaPredicted RBP22.37■■□□□ 1.17
SAPCD1-209ENST00000425424 LTN1O94822 1766 aa22.35■■□□□ 1.17
SAPCD1-209ENST00000425424 RTL1A6NKG5 1358 aa22.35■■□□□ 1.17
SAPCD1-209ENST00000425424 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
SAPCD1-209ENST00000425424 CABLES1Q8TDN4 633 aa22.34■■□□□ 1.17
SAPCD1-209ENST00000425424 ANP32CO43423 234 aa22.33■■□□□ 1.17
SAPCD1-209ENST00000425424 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.16
SAPCD1-209ENST00000425424 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
SAPCD1-209ENST00000425424 CDK12Q9NYV4 1490 aaPredicted RBP22.32■■□□□ 1.16
SAPCD1-209ENST00000425424 LMO7Q8WWI1 1683 aa22.32■■□□□ 1.16
SAPCD1-209ENST00000425424 LRP6O75581 1613 aa22.31■■□□□ 1.16
SAPCD1-209ENST00000425424 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
SAPCD1-209ENST00000425424 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
SAPCD1-209ENST00000425424 COL18A1P39060 1754 aa22.3■■□□□ 1.16
SAPCD1-209ENST00000425424 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
SAPCD1-209ENST00000425424 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
SAPCD1-209ENST00000425424 PEAK1Q9H792 1746 aa22.3■■□□□ 1.16
SAPCD1-209ENST00000425424 FLT4P35916 1363 aa22.29■■□□□ 1.16
SAPCD1-209ENST00000425424 BLMP54132 1417 aaPredicted RBP22.29■■□□□ 1.16
SAPCD1-209ENST00000425424 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
SAPCD1-209ENST00000425424 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
SAPCD1-209ENST00000425424 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
SAPCD1-209ENST00000425424 INSRP06213 1382 aa22.27■■□□□ 1.16
SAPCD1-209ENST00000425424 NWD2Q9ULI1 1742 aa22.27■■□□□ 1.16
SAPCD1-209ENST00000425424 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
SAPCD1-209ENST00000425424 PLCH1Q4KWH8 1693 aa22.26■■□□□ 1.15
SAPCD1-209ENST00000425424 SOX12O15370 315 aa22.25■■□□□ 1.15
SAPCD1-209ENST00000425424 ZC3H6P61129 1189 aaKnown RBP22.25■■□□□ 1.15
SAPCD1-209ENST00000425424 RRS1Q15050 365 aaKnown RBP22.25■■□□□ 1.15
SAPCD1-209ENST00000425424 PRDM11Q9NQV5 511 aa22.25■■□□□ 1.15
SAPCD1-209ENST00000425424 IP6K1Q92551 441 aa22.24■■□□□ 1.15
SAPCD1-209ENST00000425424 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
SAPCD1-209ENST00000425424 SLIT2O94813 1529 aa22.23■■□□□ 1.15
SAPCD1-209ENST00000425424 CNGB1Q14028 1251 aaPredicted RBP22.23■■□□□ 1.15
SAPCD1-209ENST00000425424 FAM208AQ9UK61 1670 aaKnown RBP22.23■■□□□ 1.15
SAPCD1-209ENST00000425424 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
SAPCD1-209ENST00000425424 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
SAPCD1-209ENST00000425424 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms