RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 IFIT2P09913 472 aaKnown RBP12.49□□□□□ -0.41
VPS37A-202ENST00000425020 UBTFL1P0CB47 393 aaPredicted RBP12.49□□□□□ -0.41
VPS37A-202ENST00000425020 PTMSP20962 102 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 MRE11P49959 708 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 GPATCH3Q96I76 525 aa12.49□□□□□ -0.41
VPS37A-202ENST00000425020 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
VPS37A-202ENST00000425020 ABTB2Q8N961 1025 aa12.48□□□□□ -0.41
VPS37A-202ENST00000425020 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
VPS37A-202ENST00000425020 R3HCC1Q9Y3T6 440 aaKnown RBP12.48□□□□□ -0.41
VPS37A-202ENST00000425020 CREBRFQ8IUR6 639 aa12.47□□□□□ -0.41
VPS37A-202ENST00000425020 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
VPS37A-202ENST00000425020 ATP10BO94823 1461 aa12.47□□□□□ -0.41
VPS37A-202ENST00000425020 FIBPO43427 364 aa12.47□□□□□ -0.41
VPS37A-202ENST00000425020 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
VPS37A-202ENST00000425020 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
VPS37A-202ENST00000425020 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.41
VPS37A-202ENST00000425020 SIL1Q9H173 461 aa12.46□□□□□ -0.41
VPS37A-202ENST00000425020 NUCB2P80303 420 aa12.46□□□□□ -0.41
VPS37A-202ENST00000425020 H3BQV1 296 aa12.46□□□□□ -0.42
VPS37A-202ENST00000425020 IFFO2Q5TF58 517 aa12.46□□□□□ -0.42
VPS37A-202ENST00000425020 NOS1P29475 1434 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 USHBP1Q8N6Y0 703 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 ZNF592Q92610 1267 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
VPS37A-202ENST00000425020 GRPEL1Q9HAV7 217 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 SMC3Q9UQE7 1217 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 HDGFL1Q5TGJ6 251 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 GCC1Q96CN9 775 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 PANK2Q9BZ23 570 aa12.45□□□□□ -0.42
VPS37A-202ENST00000425020 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
VPS37A-202ENST00000425020 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 FAM184AQ8NB25 1140 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 ISY1Q9ULR0 285 aaKnown RBP12.44□□□□□ -0.42
VPS37A-202ENST00000425020 FCHSD2O94868 740 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 SSFA2P28290 1259 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
VPS37A-202ENST00000425020 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 NLRP2Q9NX02 1062 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
VPS37A-202ENST00000425020 PRAG1Q86YV5 1406 aa12.44□□□□□ -0.42
VPS37A-202ENST00000425020 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 NCKAP5LQ9HCH0 1330 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 CEBPZQ03701 1054 aaKnown RBP12.43□□□□□ -0.42
VPS37A-202ENST00000425020 PZPP20742 1482 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 G3BP1Q13283 466 aaKnown RBP eCLIP12.43□□□□□ -0.42
VPS37A-202ENST00000425020 AAMPQ13685 434 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 BICD2Q8TD16 824 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
VPS37A-202ENST00000425020 GDPD2Q9HCC8 539 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 SLC52A1Q9NWF4 448 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 STK3Q13188 491 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
VPS37A-202ENST00000425020 RTEL1-TNFRSF6BF6WH68 1400 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 GNAI2P04899 355 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
VPS37A-202ENST00000425020 GOLGA6L6A8MZA4 724 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 FYB1O15117 783 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 DTNBO60941 627 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 ANXA1P04083 346 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
VPS37A-202ENST00000425020 ESCO1Q5FWF5 840 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
VPS37A-202ENST00000425020 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 RABEP1Q15276 862 aa12.41□□□□□ -0.42
VPS37A-202ENST00000425020 TNPO1Q92973 898 aaKnown RBP12.41□□□□□ -0.42
VPS37A-202ENST00000425020 NRDCO43847 1150 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 PHF14O94880 888 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 CWC27Q6UX04 472 aaKnown RBP12.4□□□□□ -0.42
VPS37A-202ENST00000425020 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 TTC5Q8N0Z6 440 aa12.4□□□□□ -0.42
VPS37A-202ENST00000425020 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
VPS37A-202ENST00000425020 SCAF11Q99590 1463 aaKnown RBP12.4□□□□□ -0.43
VPS37A-202ENST00000425020 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 BECN2A8MW95 431 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 ERC2O15083 957 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 MYL6BP14649 208 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 CCDC30Q5VVM6 783 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 ESPNB1AK53 854 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 APPP05067 770 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 GNAI3P08754 354 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 FERMT3Q86UX7 667 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 PHACTR3Q96KR7 559 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
VPS37A-202ENST00000425020 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
VPS37A-202ENST00000425020 MBIPQ9NS73 344 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 KDM6BO15054 1643 aa12.39□□□□□ -0.43
VPS37A-202ENST00000425020 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 FSD1Q9BTV5 496 aa12.38□□□□□ -0.43
VPS37A-202ENST00000425020 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms