RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 USP17L18D6R9N7 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L22D6RA61 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L17D6RBQ6 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L19D6RCP7 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L20D6RJB6 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 SKIP12755 728 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 MCCD1P59942 119 aaPredicted RBP8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L24Q0WX57 530 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 TMEM92Q6UXU6 159 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 NOP9Q86U38 636 aaKnown RBP8.14□□□□□ -1.11
LINC00240-202ENST00000424968 LRRN4Q8WUT4 740 aa8.14□□□□□ -1.11
LINC00240-202ENST00000424968 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
LINC00240-202ENST00000424968 RASA1P20936 1047 aa8.13□□□□□ -1.11
LINC00240-202ENST00000424968 ERCC5P28715 1186 aaPredicted RBP8.13□□□□□ -1.11
LINC00240-202ENST00000424968 GCGRP47871 477 aa8.13□□□□□ -1.11
LINC00240-202ENST00000424968 PACS2Q86VP3 889 aa8.13□□□□□ -1.11
LINC00240-202ENST00000424968 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
LINC00240-202ENST00000424968 MKRN1Q9UHC7 482 aaKnown RBP8.12□□□□□ -1.11
LINC00240-202ENST00000424968 ARID4BQ4LE39 1312 aaPredicted RBP8.11□□□□□ -1.11
LINC00240-202ENST00000424968 C6orf229H3BNL8 230 aa8.11□□□□□ -1.11
LINC00240-202ENST00000424968 SCAMP3O14828 347 aaKnown RBP8.11□□□□□ -1.11
LINC00240-202ENST00000424968 SERPINB4P48594 390 aa8.11□□□□□ -1.11
LINC00240-202ENST00000424968 TRIM50Q86XT4 487 aa8.11□□□□□ -1.11
LINC00240-202ENST00000424968 ZNF454Q8N9F8 522 aa8.11□□□□□ -1.11
LINC00240-202ENST00000424968 HIRIP3Q9BW71 556 aaPredicted RBP8.11□□□□□ -1.11
LINC00240-202ENST00000424968 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
LINC00240-202ENST00000424968 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 MAPK1P28482 360 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 ATP1A2P50993 1020 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 TSNAXIP1Q2TAA8 658 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 EAPPQ56P03 285 aaPredicted RBP8.1□□□□□ -1.11
LINC00240-202ENST00000424968 ANKMY2Q8IV38 441 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 GLYCTKQ8IVS8 523 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 ASB16Q96NS5 453 aa8.1□□□□□ -1.11
LINC00240-202ENST00000424968 TMA7Q9Y2S6 64 aaKnown RBP8.1□□□□□ -1.11
LINC00240-202ENST00000424968 SLFNL1Q499Z3 407 aa8.09□□□□□ -1.11
LINC00240-202ENST00000424968 NUDT18Q6ZVK8 323 aa8.09□□□□□ -1.11
LINC00240-202ENST00000424968 DCTN4Q9UJW0 460 aa8.09□□□□□ -1.11
LINC00240-202ENST00000424968 ZC3H4Q9UPT8 1303 aaKnown RBP8.08□□□□□ -1.12
LINC00240-202ENST00000424968 PTK7Q13308 1070 aa8.08□□□□□ -1.12
LINC00240-202ENST00000424968 GNL2Q13823 731 aaKnown RBP8.08□□□□□ -1.12
LINC00240-202ENST00000424968 NR6A1Q15406 480 aa8.08□□□□□ -1.12
LINC00240-202ENST00000424968 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
LINC00240-202ENST00000424968 RECKO95980 971 aa8.07□□□□□ -1.12
LINC00240-202ENST00000424968 ABL1P00519 1130 aa8.07□□□□□ -1.12
LINC00240-202ENST00000424968 HDGFP51858 240 aaKnown RBP8.07□□□□□ -1.12
LINC00240-202ENST00000424968 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
LINC00240-202ENST00000424968 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
LINC00240-202ENST00000424968 ICMTO60725 284 aa8.06□□□□□ -1.12
LINC00240-202ENST00000424968 SF3B2Q13435 895 aaKnown RBP8.06□□□□□ -1.12
LINC00240-202ENST00000424968 MAP7D1Q3KQU3 841 aa8.06□□□□□ -1.12
LINC00240-202ENST00000424968 CRTC2Q53ET0 693 aaPredicted RBP8.06□□□□□ -1.12
LINC00240-202ENST00000424968 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
LINC00240-202ENST00000424968 TATDN2Q93075 761 aa8.06□□□□□ -1.12
LINC00240-202ENST00000424968 PNMA3Q9UL41 463 aa8.06□□□□□ -1.12
LINC00240-202ENST00000424968 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 H3BRB1 525 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 FAM69CQ0P6D2 419 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 EML3Q32P44 896 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 SOGA3Q5TF21 947 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 DESI1Q6ICB0 168 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 ARMC5Q96C12 935 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 TANGO6Q9C0B7 1094 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 TUT1Q9H6E5 874 aaKnown RBP8.05□□□□□ -1.12
LINC00240-202ENST00000424968 CWC22Q9HCG8 908 aaKnown RBP8.05□□□□□ -1.12
LINC00240-202ENST00000424968 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
LINC00240-202ENST00000424968 DPH6Q7L8W6 267 aa8.04□□□□□ -1.12
LINC00240-202ENST00000424968 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
LINC00240-202ENST00000424968 PSDA5PKW4 1024 aaPredicted RBP8.03□□□□□ -1.12
LINC00240-202ENST00000424968 SNPHO15079 494 aa8.03□□□□□ -1.12
LINC00240-202ENST00000424968 C21orf2O43822 256 aa8.03□□□□□ -1.12
LINC00240-202ENST00000424968 DPYDQ12882 1025 aa8.03□□□□□ -1.12
LINC00240-202ENST00000424968 LARGE2Q8N3Y3 721 aa8.03□□□□□ -1.12
LINC00240-202ENST00000424968 PIK3CDO00329 1044 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 CLSTN1O94985 981 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 ATP2B1P20020 1258 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 BRD2P25440 801 aaKnown RBP8.02□□□□□ -1.13
LINC00240-202ENST00000424968 NCOA4Q13772 614 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 RGL4Q8IZJ4 473 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 SLC43A3Q8NBI5 491 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
LINC00240-202ENST00000424968 NOD1Q9Y239 953 aa8.02□□□□□ -1.13
LINC00240-202ENST00000424968 PPP1R3GB7ZBB8 358 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 FKBP4Q02790 459 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC00240-202ENST00000424968 Q3C1V9 767 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 TAS1R3Q7RTX0 852 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 DEPDC4Q8N2C3 294 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 OGFOD1Q8N543 542 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 BACH2Q9BYV9 841 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 DNAAF2Q9NVR5 837 aaKnown RBP8.01□□□□□ -1.13
LINC00240-202ENST00000424968 FKBPLQ9UIM3 349 aa8.01□□□□□ -1.13
LINC00240-202ENST00000424968 XPCQ01831 940 aaPredicted RBP8□□□□□ -1.13
LINC00240-202ENST00000424968 NOL8Q76FK4 1167 aaKnown RBP8□□□□□ -1.13
LINC00240-202ENST00000424968 METTL5Q9NRN9 209 aaKnown RBP8□□□□□ -1.13
LINC00240-202ENST00000424968 GPSM3Q9Y4H4 160 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms