RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 HECW2Q9P2P5 1572 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 ZMYM3Q14202 1370 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 ABCC11Q96J66 1382 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 PRKCSHP14314 528 aaPredicted RBP17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 RIPK4P57078 832 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
TPM3P9-201ENST00000424846 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
TPM3P9-201ENST00000424846 NSD2O96028 1365 aa17.97■□□□□ 0.47
TPM3P9-201ENST00000424846 VGFO15240 615 aaPredicted RBP17.96■□□□□ 0.47
TPM3P9-201ENST00000424846 RRAGDQ9NQL2 400 aaPredicted RBP17.96■□□□□ 0.47
TPM3P9-201ENST00000424846 MCM4P33991 863 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 ZBTB40Q9NUA8 1239 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 PANK2Q9BZ23 570 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
TPM3P9-201ENST00000424846 FAM43AQ8N2R8 423 aa17.94■□□□□ 0.46
TPM3P9-201ENST00000424846 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
TPM3P9-201ENST00000424846 THUMPD2Q9BTF0 503 aaKnown RBP17.94■□□□□ 0.46
TPM3P9-201ENST00000424846 CD163L1Q9NR16 1453 aa17.94■□□□□ 0.46
TPM3P9-201ENST00000424846 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.46
TPM3P9-201ENST00000424846 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
TPM3P9-201ENST00000424846 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 EIF5BO60841 1220 aaKnown RBP17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 C1orf115Q9H7X2 142 aa17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
TPM3P9-201ENST00000424846 PIK3C2BO00750 1634 aa17.91■□□□□ 0.46
TPM3P9-201ENST00000424846 MYO5BQ9ULV0 1848 aa17.91■□□□□ 0.46
TPM3P9-201ENST00000424846 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
TPM3P9-201ENST00000424846 PTPRMP28827 1452 aa17.89■□□□□ 0.45
TPM3P9-201ENST00000424846 CHMP5Q9NZZ3 219 aa17.89■□□□□ 0.45
TPM3P9-201ENST00000424846 NUCB1Q02818 461 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■■□□□ 12.6
TPM3P9-201ENST00000424846 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 ELL2O00472 640 aaPredicted RBP17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 TSPYL6Q8N831 410 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 FSD2A1L4K1 749 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 HMOX1P09601 288 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
TPM3P9-201ENST00000424846 TRAK2O60296 914 aa17.87■□□□□ 0.45
TPM3P9-201ENST00000424846 CD2BP2O95400 341 aaKnown RBP17.87■□□□□ 0.45
TPM3P9-201ENST00000424846 IL16Q14005 1332 aa17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 L1TD1Q5T7N2 865 aaKnown RBP17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 CHD1LQ86WJ1 897 aa17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 LRRC7Q96NW7 1537 aa17.86■□□□□ 0.45
TPM3P9-201ENST00000424846 NPM1P06748 294 aaKnown RBP eCLIP17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 FBXO31Q5XUX0 539 aaPredicted RBP17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 GOLGA6L3A6NEY3 463 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 HSCBQ8IWL3 235 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 FOXD4L1Q9NU39 408 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 KIF16BQ96L93 1317 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 RSPH6AQ9H0K4 717 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
TPM3P9-201ENST00000424846 KIF2CQ99661 725 aa17.84■□□□□ 0.45
TPM3P9-201ENST00000424846 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
TPM3P9-201ENST00000424846 DDIT3P35638 169 aa17.84■□□□□ 0.45
TPM3P9-201ENST00000424846 ANKRD45Q5TZF3 282 aa17.84■□□□□ 0.45
TPM3P9-201ENST00000424846 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
TPM3P9-201ENST00000424846 SIRT2Q8IXJ6 389 aa17.83■□□□□ 0.45
TPM3P9-201ENST00000424846 POLKQ9UBT6 870 aa17.83■□□□□ 0.45
TPM3P9-201ENST00000424846 ZBTB7BO15156 539 aaPredicted RBP17.83■□□□□ 0.44
TPM3P9-201ENST00000424846 RBM25P49756 843 aaKnown RBP17.83■□□□□ 0.44
TPM3P9-201ENST00000424846 YTHDC2Q9H6S0 1430 aaKnown RBP17.83■□□□□ 0.44
TPM3P9-201ENST00000424846 ATAD2Q6PL18 1390 aa17.83■□□□□ 0.44
TPM3P9-201ENST00000424846 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 ANKRD26Q9UPS8 1709 aa17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 WAPLQ7Z5K2 1190 aa17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 ZRANB1Q9UGI0 708 aa17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 VAMP4O75379 141 aa17.82■□□□□ 0.44
TPM3P9-201ENST00000424846 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
TPM3P9-201ENST00000424846 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
TPM3P9-201ENST00000424846 DIP2CQ9Y2E4 1556 aa17.81■□□□□ 0.44
TPM3P9-201ENST00000424846 ALDH1L2Q3SY69 923 aa17.81■□□□□ 0.44
TPM3P9-201ENST00000424846 FCHSD2O94868 740 aa17.8■□□□□ 0.44
TPM3P9-201ENST00000424846 HDGFL2Q7Z4V5 671 aaPredicted RBP17.8■□□□□ 0.44
TPM3P9-201ENST00000424846 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
TPM3P9-201ENST00000424846 TNPO1Q92973 898 aaKnown RBP17.8■□□□□ 0.44
TPM3P9-201ENST00000424846 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
TPM3P9-201ENST00000424846 MED14O60244 1454 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 TMEM131LA2VDJ0 1609 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 ZFYVE9O95405 1425 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 TBC1D9Q6ZT07 1266 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 ARHGEF40Q8TER5 1519 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 SLC52A1Q9NWF4 448 aa17.78■□□□□ 0.44
TPM3P9-201ENST00000424846 BMP2KLQ5H9B9 411 aa17.77■□□□□ 0.44
TPM3P9-201ENST00000424846 MBIPQ9NS73 344 aa17.77■□□□□ 0.44
TPM3P9-201ENST00000424846 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.43
TPM3P9-201ENST00000424846 CFAP74Q9C0B2 1584 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 HSP90AB1P08238 724 aaKnown RBP17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
TPM3P9-201ENST00000424846 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms