RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
VRK3-203ENST00000424804 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
VRK3-203ENST00000424804 NGDNQ8NEJ9 315 aaKnown RBP18.9■□□□□ 0.62
VRK3-203ENST00000424804 BTG4Q9NY30 223 aa18.9■□□□□ 0.62
VRK3-203ENST00000424804 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
VRK3-203ENST00000424804 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
VRK3-203ENST00000424804 POLR3AO14802 1390 aaPredicted RBP18.89■□□□□ 0.61
VRK3-203ENST00000424804 PLEKHG3A1L390 1219 aa18.87■□□□□ 0.61
VRK3-203ENST00000424804 DEFB132Q7Z7B7 95 aa18.87■□□□□ 0.61
VRK3-203ENST00000424804 SPATA31A5Q5VU36 1347 aa18.86■□□□□ 0.61
VRK3-203ENST00000424804 SPATA31A7Q8IWB4 1347 aa18.86■□□□□ 0.61
VRK3-203ENST00000424804 KRT27Q7Z3Y8 459 aa18.86■□□□□ 0.61
VRK3-203ENST00000424804 ACEP12821 1306 aa18.85■□□□□ 0.61
VRK3-203ENST00000424804 PAK3O75914 559 aaPredicted RBP18.85■□□□□ 0.61
VRK3-203ENST00000424804 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
VRK3-203ENST00000424804 NBPF8Q3BBV2 869 aa18.85■□□□□ 0.61
VRK3-203ENST00000424804 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
VRK3-203ENST00000424804 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
VRK3-203ENST00000424804 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
VRK3-203ENST00000424804 CCDC61Q9Y6R9 512 aa18.84■□□□□ 0.61
VRK3-203ENST00000424804 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
VRK3-203ENST00000424804 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
VRK3-203ENST00000424804 NUTM2GQ5VZR2 741 aa18.81■□□□□ 0.6
VRK3-203ENST00000424804 CHRNA2Q15822 529 aa18.8■□□□□ 0.6
VRK3-203ENST00000424804 L3MBTL2Q969R5 705 aa18.8■□□□□ 0.6
VRK3-203ENST00000424804 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
VRK3-203ENST00000424804 SPATA31A1Q5TZJ5 1347 aa18.78■□□□□ 0.6
VRK3-203ENST00000424804 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
VRK3-203ENST00000424804 FAM182BQ5T319 152 aa18.78■□□□□ 0.6
VRK3-203ENST00000424804 USP19O94966 1318 aa18.77■□□□□ 0.6
VRK3-203ENST00000424804 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.6
VRK3-203ENST00000424804 NRKQ7Z2Y5 1582 aa18.77■□□□□ 0.6
VRK3-203ENST00000424804 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
VRK3-203ENST00000424804 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
VRK3-203ENST00000424804 LMO7Q8WWI1 1683 aa18.76■□□□□ 0.59
VRK3-203ENST00000424804 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
VRK3-203ENST00000424804 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
VRK3-203ENST00000424804 PPIP5K1Q6PFW1 1433 aa18.75■□□□□ 0.59
VRK3-203ENST00000424804 CPDO75976 1380 aa18.74■□□□□ 0.59
VRK3-203ENST00000424804 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
VRK3-203ENST00000424804 SSH2Q76I76 1423 aa18.74■□□□□ 0.59
VRK3-203ENST00000424804 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
VRK3-203ENST00000424804 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
VRK3-203ENST00000424804 ABTB2Q8N961 1025 aa18.73■□□□□ 0.59
VRK3-203ENST00000424804 TNS1Q9HBL0 1735 aaKnown RBP18.72■□□□□ 0.59
VRK3-203ENST00000424804 A0A0G2JS52 829 aa18.72■□□□□ 0.59
VRK3-203ENST00000424804 SRPK2P78362 688 aaKnown RBP18.72■□□□□ 0.59
VRK3-203ENST00000424804 MYT1Q01538 1121 aa18.72■□□□□ 0.59
VRK3-203ENST00000424804 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
VRK3-203ENST00000424804 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
VRK3-203ENST00000424804 GCP02774 474 aa18.71■□□□□ 0.59
VRK3-203ENST00000424804 STRN4Q9NRL3 753 aa18.71■□□□□ 0.59
VRK3-203ENST00000424804 DISP2A7MBM2 1401 aa18.7■□□□□ 0.58
VRK3-203ENST00000424804 EN1Q05925 392 aaPredicted RBP18.7■□□□□ 0.58
VRK3-203ENST00000424804 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
VRK3-203ENST00000424804 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
VRK3-203ENST00000424804 USP6P35125 1406 aa18.69■□□□□ 0.58
VRK3-203ENST00000424804 BAG6P46379 1132 aa18.69■□□□□ 0.58
VRK3-203ENST00000424804 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
VRK3-203ENST00000424804 NLRP13Q86W25 1043 aa18.68■□□□□ 0.58
VRK3-203ENST00000424804 COL18A1P39060 1754 aa18.68■□□□□ 0.58
VRK3-203ENST00000424804 SLIT3O75094 1523 aa18.67■□□□□ 0.58
VRK3-203ENST00000424804 CAMKK2Q96RR4 588 aa18.66■□□□□ 0.58
VRK3-203ENST00000424804 PIK3C2AO00443 1686 aa18.66■□□□□ 0.58
VRK3-203ENST00000424804 EVA1CP58658 441 aa18.65■□□□□ 0.58
VRK3-203ENST00000424804 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
VRK3-203ENST00000424804 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
VRK3-203ENST00000424804 LRP5O75197 1615 aa18.64■□□□□ 0.57
VRK3-203ENST00000424804 PSDA5PKW4 1024 aaPredicted RBP18.64■□□□□ 0.57
VRK3-203ENST00000424804 NEUROD1Q13562 356 aa18.64■□□□□ 0.57
VRK3-203ENST00000424804 EZH2Q15910 746 aaKnown RBP18.64■□□□□ 0.57
VRK3-203ENST00000424804 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
VRK3-203ENST00000424804 TRIM37O94972 964 aa18.63■□□□□ 0.57
VRK3-203ENST00000424804 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
VRK3-203ENST00000424804 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
VRK3-203ENST00000424804 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
VRK3-203ENST00000424804 NLRP6P59044 892 aa18.62■□□□□ 0.57
VRK3-203ENST00000424804 AXIN2Q9Y2T1 843 aa18.62■□□□□ 0.57
VRK3-203ENST00000424804 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
VRK3-203ENST00000424804 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
VRK3-203ENST00000424804 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
VRK3-203ENST00000424804 THRAP3Q9Y2W1 955 aaKnown RBP18.61■□□□□ 0.57
VRK3-203ENST00000424804 ROCK2O75116 1388 aaKnown RBP18.6■□□□□ 0.57
VRK3-203ENST00000424804 TTC21BQ7Z4L5 1316 aa18.6■□□□□ 0.57
VRK3-203ENST00000424804 PEAK1Q9H792 1746 aa18.59■□□□□ 0.57
VRK3-203ENST00000424804 CRB1P82279 1406 aa18.58■□□□□ 0.57
VRK3-203ENST00000424804 RGPD5Q99666 1765 aa18.58■□□□□ 0.57
VRK3-203ENST00000424804 RREB1Q92766 1687 aa18.58■□□□□ 0.57
VRK3-203ENST00000424804 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
VRK3-203ENST00000424804 APBA3O96018 575 aa18.57■□□□□ 0.56
VRK3-203ENST00000424804 PDE3BQ13370 1112 aa18.57■□□□□ 0.56
VRK3-203ENST00000424804 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
VRK3-203ENST00000424804 ARHGEF25Q86VW2 580 aa18.57■□□□□ 0.56
VRK3-203ENST00000424804 SBF2Q86WG5 1849 aa18.56■□□□□ 0.56
VRK3-203ENST00000424804 CD163L1Q9NR16 1453 aa18.55■□□□□ 0.56
VRK3-203ENST00000424804 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
VRK3-203ENST00000424804 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
VRK3-203ENST00000424804 NFAT5O94916 1531 aa18.54■□□□□ 0.56
VRK3-203ENST00000424804 MON2Q7Z3U7 1717 aa18.54■□□□□ 0.56
VRK3-203ENST00000424804 WNK3Q9BYP7 1800 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms