RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 NINLQ9Y2I6 1382 aa18.36■□□□□ 0.53
PRPF39-202ENST00000424478 FYB1O15117 783 aa18.36■□□□□ 0.53
PRPF39-202ENST00000424478 CCDC184Q52MB2 194 aa18.36■□□□□ 0.53
PRPF39-202ENST00000424478 CERKQ8TCT0 537 aa18.36■□□□□ 0.53
PRPF39-202ENST00000424478 PRKRIP1Q9H875 184 aaPredicted RBP18.35■□□□□ 0.53
PRPF39-202ENST00000424478 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
PRPF39-202ENST00000424478 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
PRPF39-202ENST00000424478 MON2Q7Z3U7 1717 aa18.34■□□□□ 0.53
PRPF39-202ENST00000424478 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
PRPF39-202ENST00000424478 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.52
PRPF39-202ENST00000424478 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-202ENST00000424478 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
PRPF39-202ENST00000424478 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
PRPF39-202ENST00000424478 ROBO1Q9Y6N7 1651 aa18.31■□□□□ 0.52
PRPF39-202ENST00000424478 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
PRPF39-202ENST00000424478 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
PRPF39-202ENST00000424478 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
PRPF39-202ENST00000424478 SSH2Q76I76 1423 aa18.29■□□□□ 0.52
PRPF39-202ENST00000424478 NLRP6P59044 892 aa18.28■□□□□ 0.52
PRPF39-202ENST00000424478 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
PRPF39-202ENST00000424478 TOM1O60784 492 aa18.28■□□□□ 0.52
PRPF39-202ENST00000424478 PIK3C2AO00443 1686 aa18.27■□□□□ 0.52
PRPF39-202ENST00000424478 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
PRPF39-202ENST00000424478 KIF1AQ12756 1690 aa18.26■□□□□ 0.51
PRPF39-202ENST00000424478 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
PRPF39-202ENST00000424478 SENP3-EIF4A1A0A087X0R7 540 aa18.26■□□□□ 0.51
PRPF39-202ENST00000424478 ZBTB7CA1YPR0 619 aa18.26■□□□□ 0.51
PRPF39-202ENST00000424478 RRS1Q15050 365 aaKnown RBP18.26■□□□□ 0.51
PRPF39-202ENST00000424478 PARD3Q8TEW0 1356 aa18.25■□□□□ 0.51
PRPF39-202ENST00000424478 COG3Q96JB2 828 aa18.24■□□□□ 0.51
PRPF39-202ENST00000424478 PXDNQ92626 1479 aa18.24■□□□□ 0.51
PRPF39-202ENST00000424478 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
PRPF39-202ENST00000424478 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
PRPF39-202ENST00000424478 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
PRPF39-202ENST00000424478 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
PRPF39-202ENST00000424478 RALBP1Q15311 655 aa18.2■□□□□ 0.5
PRPF39-202ENST00000424478 MRS2Q9HD23 443 aa18.2■□□□□ 0.5
PRPF39-202ENST00000424478 MARF1Q9Y4F3 1742 aaKnown RBP18.2■□□□□ 0.5
PRPF39-202ENST00000424478 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
PRPF39-202ENST00000424478 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
PRPF39-202ENST00000424478 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
PRPF39-202ENST00000424478 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
PRPF39-202ENST00000424478 MTHFSP49914 203 aa18.19■□□□□ 0.5
PRPF39-202ENST00000424478 NHSL1Q5SYE7 1610 aa18.19■□□□□ 0.5
PRPF39-202ENST00000424478 SPATA31A3Q5VYP0 1347 aa18.19■□□□□ 0.5
PRPF39-202ENST00000424478 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
PRPF39-202ENST00000424478 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
PRPF39-202ENST00000424478 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
PRPF39-202ENST00000424478 TNS3Q68CZ2 1445 aa18.17■□□□□ 0.5
PRPF39-202ENST00000424478 ALS2Q96Q42 1657 aa18.17■□□□□ 0.5
PRPF39-202ENST00000424478 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
PRPF39-202ENST00000424478 YTHDC1Q96MU7 727 aaKnown RBP18.16■□□□□ 0.5
PRPF39-202ENST00000424478 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
PRPF39-202ENST00000424478 NSD2O96028 1365 aa18.16■□□□□ 0.5
PRPF39-202ENST00000424478 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
PRPF39-202ENST00000424478 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
PRPF39-202ENST00000424478 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
PRPF39-202ENST00000424478 MED1Q15648 1581 aaPredicted RBP18.15■□□□□ 0.5
PRPF39-202ENST00000424478 GCP02774 474 aa18.14■□□□□ 0.49
PRPF39-202ENST00000424478 HSPA1LP34931 641 aa18.14■□□□□ 0.49
PRPF39-202ENST00000424478 MAP3K19Q56UN5 1328 aa18.13■□□□□ 0.49
PRPF39-202ENST00000424478 CHRNA2Q15822 529 aa18.13■□□□□ 0.49
PRPF39-202ENST00000424478 SBNO1A3KN83 1393 aa18.13■□□□□ 0.49
PRPF39-202ENST00000424478 USP31Q70CQ4 1352 aa18.12■□□□□ 0.49
PRPF39-202ENST00000424478 NUTM2BA6NNL0 878 aaPredicted RBP18.12■□□□□ 0.49
PRPF39-202ENST00000424478 NUTM2EB1AL46 878 aaPredicted RBP18.12■□□□□ 0.49
PRPF39-202ENST00000424478 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
PRPF39-202ENST00000424478 NUTM2AQ8IVF1 878 aaPredicted RBP18.12■□□□□ 0.49
PRPF39-202ENST00000424478 HSP90AB2PQ58FF8 381 aa18.11■□□□□ 0.49
PRPF39-202ENST00000424478 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
PRPF39-202ENST00000424478 COL16A1Q07092 1604 aaPredicted RBP18.11■□□□□ 0.49
PRPF39-202ENST00000424478 AHDC1Q5TGY3 1603 aaPredicted RBP18.11■□□□□ 0.49
PRPF39-202ENST00000424478 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
PRPF39-202ENST00000424478 LRRC59Q96AG4 307 aaKnown RBP18.1■□□□□ 0.49
PRPF39-202ENST00000424478 PEAK1Q9H792 1746 aa18.09■□□□□ 0.49
PRPF39-202ENST00000424478 AMPHP49418 695 aa18.08■□□□□ 0.49
PRPF39-202ENST00000424478 ADAMTS2O95450 1211 aa18.08■□□□□ 0.48
PRPF39-202ENST00000424478 USP19O94966 1318 aa18.08■□□□□ 0.48
PRPF39-202ENST00000424478 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
PRPF39-202ENST00000424478 ARHGEF10O15013 1369 aa18.07■□□□□ 0.48
PRPF39-202ENST00000424478 LTN1O94822 1766 aa18.07■□□□□ 0.48
PRPF39-202ENST00000424478 NFAT5O94916 1531 aa18.07■□□□□ 0.48
PRPF39-202ENST00000424478 AXIN2Q9Y2T1 843 aa18.07■□□□□ 0.48
PRPF39-202ENST00000424478 BRD4O60885 1362 aaPredicted RBP18.06■□□□□ 0.48
PRPF39-202ENST00000424478 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
PRPF39-202ENST00000424478 PHRF1Q9P1Y6 1649 aaKnown RBP18.06■□□□□ 0.48
PRPF39-202ENST00000424478 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
PRPF39-202ENST00000424478 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
PRPF39-202ENST00000424478 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
PRPF39-202ENST00000424478 SLIT3O75094 1523 aa18.04■□□□□ 0.48
PRPF39-202ENST00000424478 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
PRPF39-202ENST00000424478 KCNH5Q8NCM2 988 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 RGPD5Q99666 1765 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 HOXC9P31274 260 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 ARHGEF25Q86VW2 580 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 ADAMTS8Q9UP79 889 aa18.03■□□□□ 0.48
PRPF39-202ENST00000424478 ABCA3Q99758 1704 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms