RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 KTN1Q86UP2 1357 aaKnown RBP35.3■■■■□ 3.24
TSPAN3-203ENST00000424443 CPSF1Q10570 1443 aaKnown RBP35.28■■■■□ 3.24
TSPAN3-203ENST00000424443 AKAP12Q02952 1782 aa35.28■■■■□ 3.24
TSPAN3-203ENST00000424443 COL22A1Q8NFW1 1626 aaPredicted RBP35.27■■■■□ 3.24
TSPAN3-203ENST00000424443 PLEKHG5O94827 1062 aa35.26■■■■□ 3.23
TSPAN3-203ENST00000424443 HAP1P54257 671 aaPredicted RBP35.25■■■■□ 3.23
TSPAN3-203ENST00000424443 MEX3CQ5U5Q3 659 aaKnown RBP35.25■■■■□ 3.23
TSPAN3-203ENST00000424443 ALS2Q96Q42 1657 aa35.24■■■■□ 3.23
TSPAN3-203ENST00000424443 ABTB2Q8N961 1025 aa35.24■■■■□ 3.23
TSPAN3-203ENST00000424443 MED1Q15648 1581 aaPredicted RBP35.23■■■■□ 3.23
TSPAN3-203ENST00000424443 CD163L1Q9NR16 1453 aa35.22■■■■□ 3.23
TSPAN3-203ENST00000424443 A0A1W2PP64 1363 aa35.22■■■■□ 3.23
TSPAN3-203ENST00000424443 MON2Q7Z3U7 1717 aa35.2■■■■□ 3.23
TSPAN3-203ENST00000424443 TTC21BQ7Z4L5 1316 aa35.2■■■■□ 3.23
TSPAN3-203ENST00000424443 ANKRD36BQ8N2N9 1353 aa35.2■■■■□ 3.22
TSPAN3-203ENST00000424443 NUTM2GQ5VZR2 741 aa35.19■■■■□ 3.22
TSPAN3-203ENST00000424443 C11orf95C9JLR9 678 aaPredicted RBP35.18■■■■□ 3.22
TSPAN3-203ENST00000424443 TTC21AQ8NDW8 1320 aa35.18■■■■□ 3.22
TSPAN3-203ENST00000424443 LRP6O75581 1613 aa35.18■■■■□ 3.22
TSPAN3-203ENST00000424443 SSH2Q76I76 1423 aa35.17■■■■□ 3.22
TSPAN3-203ENST00000424443 CABLES1Q8TDN4 633 aa35.17■■■■□ 3.22
TSPAN3-203ENST00000424443 ADAMTS2O95450 1211 aa35.16■■■■□ 3.22
TSPAN3-203ENST00000424443 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.16■■■■□ 3.22
TSPAN3-203ENST00000424443 EDC4Q6P2E9 1401 aaKnown RBP35.16■■■■□ 3.22
TSPAN3-203ENST00000424443 NLRP13Q86W25 1043 aa35.16■■■■□ 3.22
TSPAN3-203ENST00000424443 MYOM1P52179 1685 aa35.15■■■■□ 3.22
TSPAN3-203ENST00000424443 PHF23Q9BUL5 403 aaPredicted RBP35.15■■■■□ 3.22
TSPAN3-203ENST00000424443 NRKQ7Z2Y5 1582 aa35.13■■■■□ 3.21
TSPAN3-203ENST00000424443 NLRP6P59044 892 aa35.13■■■■□ 3.21
TSPAN3-203ENST00000424443 KIF7Q2M1P5 1343 aa35.13■■■■□ 3.21
TSPAN3-203ENST00000424443 C8orf37Q96NL8 207 aa35.08■■■■□ 3.21
TSPAN3-203ENST00000424443 PIK3C2AO00443 1686 aa35.07■■■■□ 3.2
TSPAN3-203ENST00000424443 ABCA3Q99758 1704 aa35.06■■■■□ 3.2
TSPAN3-203ENST00000424443 NGLY1Q96IV0 654 aa35.05■■■■□ 3.2
TSPAN3-203ENST00000424443 NME9Q86XW9 330 aa35.04■■■■□ 3.2
TSPAN3-203ENST00000424443 CCDC7Q96M83 1385 aa35.03■■■■□ 3.2
TSPAN3-203ENST00000424443 USP19O94966 1318 aa35.02■■■■□ 3.2
TSPAN3-203ENST00000424443 MARF1Q9Y4F3 1742 aaKnown RBP35.01■■■■□ 3.2
TSPAN3-203ENST00000424443 CRYBG1Q9Y4K1 1723 aa35.01■■■■□ 3.2
TSPAN3-203ENST00000424443 WASHC2AQ641Q2 1341 aa35.01■■■■□ 3.2
TSPAN3-203ENST00000424443 PHRF1Q9P1Y6 1649 aaKnown RBP35.01■■■■□ 3.2
TSPAN3-203ENST00000424443 PANK3Q9H999 370 aa35■■■■□ 3.19
TSPAN3-203ENST00000424443 NSD3Q9BZ95 1437 aa34.99■■■■□ 3.19
TSPAN3-203ENST00000424443 GCP02774 474 aa34.99■■■■□ 3.19
TSPAN3-203ENST00000424443 CARD14Q9BXL6 1004 aa34.98■■■■□ 3.19
TSPAN3-203ENST00000424443 USP31Q70CQ4 1352 aa34.97■■■■□ 3.19
TSPAN3-203ENST00000424443 AFF2P51816 1311 aa34.96■■■■□ 3.19
TSPAN3-203ENST00000424443 ZC3H6P61129 1189 aaKnown RBP34.96■■■■□ 3.19
TSPAN3-203ENST00000424443 KCNH5Q8NCM2 988 aa34.96■■■■□ 3.19
TSPAN3-203ENST00000424443 ZRANB1Q9UGI0 708 aa34.96■■■■□ 3.19
TSPAN3-203ENST00000424443 COG3Q96JB2 828 aa34.95■■■■□ 3.19
TSPAN3-203ENST00000424443 PRDM11Q9NQV5 511 aa34.95■■■■□ 3.19
TSPAN3-203ENST00000424443 ZNF772Q68DY9 489 aaPredicted RBP34.94■■■■□ 3.18
TSPAN3-203ENST00000424443 SOX12O15370 315 aa34.93■■■■□ 3.18
TSPAN3-203ENST00000424443 SLIT3O75094 1523 aa34.93■■■■□ 3.18
TSPAN3-203ENST00000424443 CGNL1Q0VF96 1302 aa34.92■■■■□ 3.18
TSPAN3-203ENST00000424443 KIAA0232Q92628 1395 aa34.91■■■■□ 3.18
TSPAN3-203ENST00000424443 FYB1O15117 783 aa34.91■■■■□ 3.18
TSPAN3-203ENST00000424443 FNBP4Q8N3X1 1017 aaPredicted RBP34.9■■■■□ 3.18
TSPAN3-203ENST00000424443 GGNBP2Q9H3C7 697 aa34.9■■■■□ 3.18
TSPAN3-203ENST00000424443 USP21Q9UK80 565 aa34.9■■■■□ 3.18
TSPAN3-203ENST00000424443 USP54Q70EL1 1684 aa34.89■■■■□ 3.18
TSPAN3-203ENST00000424443 ZBTB7CA1YPR0 619 aa34.89■■■■□ 3.18
TSPAN3-203ENST00000424443 FAM83GA6ND36 823 aa34.89■■■■□ 3.18
TSPAN3-203ENST00000424443 KIF20BQ96Q89 1820 aa34.88■■■■□ 3.17
TSPAN3-203ENST00000424443 OVOS2A0A0J9YW53 1432 aa34.88■■■■□ 3.17
TSPAN3-203ENST00000424443 OVOS2Q6IE36 1432 aa34.88■■■■□ 3.17
TSPAN3-203ENST00000424443 KNSTRNQ9Y448 316 aa34.88■■■■□ 3.17
TSPAN3-203ENST00000424443 RGS17Q9UGC6 210 aaPredicted RBP34.86■■■■□ 3.17
TSPAN3-203ENST00000424443 COL14A1Q05707 1796 aaKnown RBP34.86■■■■□ 3.17
TSPAN3-203ENST00000424443 CPDO75976 1380 aa34.86■■■■□ 3.17
TSPAN3-203ENST00000424443 CHRNA2Q15822 529 aa34.86■■■■□ 3.17
TSPAN3-203ENST00000424443 SLIT2O94813 1529 aa34.82■■■■□ 3.17
TSPAN3-203ENST00000424443 BTG4Q9NY30 223 aa34.82■■■■□ 3.16
TSPAN3-203ENST00000424443 PLCH1Q4KWH8 1693 aa34.82■■■■□ 3.16
TSPAN3-203ENST00000424443 UNC5CLQ8IV45 518 aa34.81■■■■□ 3.16
TSPAN3-203ENST00000424443 QTRT2Q9H974 415 aaKnown RBP34.8■■■■□ 3.16
TSPAN3-203ENST00000424443 NWD2Q9ULI1 1742 aa34.79■■■■□ 3.16
TSPAN3-203ENST00000424443 NFAT5O94916 1531 aa34.79■■■■□ 3.16
TSPAN3-203ENST00000424443 ARHGEF25Q86VW2 580 aa34.78■■■■□ 3.16
TSPAN3-203ENST00000424443 TRPC5Q9UL62 973 aaPredicted RBP34.78■■■■□ 3.16
TSPAN3-203ENST00000424443 BCL9LQ86UU0 1499 aa34.78■■■■□ 3.16
TSPAN3-203ENST00000424443 POTEAQ6S8J7 498 aa34.76■■■■□ 3.16
TSPAN3-203ENST00000424443 NSD2O96028 1365 aa34.75■■■■□ 3.15
TSPAN3-203ENST00000424443 AATKQ6ZMQ8 1374 aa34.74■■■■□ 3.15
TSPAN3-203ENST00000424443 EVA1CP58658 441 aa34.73■■■■□ 3.15
TSPAN3-203ENST00000424443 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.73■■■■□ 3.15
TSPAN3-203ENST00000424443 CCDC9Q9Y3X0 531 aaKnown RBP34.72■■■■□ 3.15
TSPAN3-203ENST00000424443 PER1O15534 1290 aaPredicted RBP34.71■■■■□ 3.15
TSPAN3-203ENST00000424443 STRN4Q9NRL3 753 aa34.71■■■■□ 3.15
TSPAN3-203ENST00000424443 LTN1O94822 1766 aa34.69■■■■□ 3.14
TSPAN3-203ENST00000424443 RXRBP28702 533 aa34.69■■■■□ 3.14
TSPAN3-203ENST00000424443 ATRNO75882 1429 aa34.69■■■■□ 3.14
TSPAN3-203ENST00000424443 ANKRD26Q9UPS8 1709 aa34.69■■■■□ 3.14
TSPAN3-203ENST00000424443 LMO7Q8WWI1 1683 aa34.68■■■■□ 3.14
TSPAN3-203ENST00000424443 NRAPQ86VF7 1730 aa34.67■■■■□ 3.14
TSPAN3-203ENST00000424443 FBLN1P23142 703 aa34.67■■■■□ 3.14
TSPAN3-203ENST00000424443 VPS72Q15906 364 aa34.67■■■■□ 3.14
TSPAN3-203ENST00000424443 AMER1Q5JTC6 1135 aaPredicted RBP34.67■■■■□ 3.14
TSPAN3-203ENST00000424443 MORC1Q86VD1 984 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms