RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.2□□□□□ -1.74
PMS1-210ENST00000424307 FZD5Q13467 585 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 LYPD4Q6UWN0 246 aa4.2□□□□□ -1.74
PMS1-210ENST00000424307 PURBQ96QR8 312 aaKnown RBP4.2□□□□□ -1.74
PMS1-210ENST00000424307 BRICD5Q6PL45 260 aa4.19□□□□□ -1.74
PMS1-210ENST00000424307 DAXXQ9UER7 740 aaPredicted RBP4.19□□□□□ -1.74
PMS1-210ENST00000424307 DCAF8L2P0C7V8 631 aa4.19□□□□□ -1.74
PMS1-210ENST00000424307 MMP16P51512 607 aa4.19□□□□□ -1.74
PMS1-210ENST00000424307 PXYLP1Q8TE99 480 aa4.19□□□□□ -1.74
PMS1-210ENST00000424307 RTN4Q9NQC3 1192 aaKnown RBP4.18□□□□□ -1.74
PMS1-210ENST00000424307 PAX4O43316 350 aa4.17□□□□□ -1.74
PMS1-210ENST00000424307 CELA2BP08218 269 aaPredicted RBP4.17□□□□□ -1.74
PMS1-210ENST00000424307 SKOR1P84550 965 aa4.17□□□□□ -1.74
PMS1-210ENST00000424307 KRBA1A5PL33 1030 aa4.17□□□□□ -1.74
PMS1-210ENST00000424307 SRSF11Q05519 484 aaKnown RBP4.16□□□□□ -1.74
PMS1-210ENST00000424307 ADAMTS2O95450 1211 aa4.16□□□□□ -1.74
PMS1-210ENST00000424307 GCGRP47871 477 aa4.16□□□□□ -1.74
PMS1-210ENST00000424307 HIC1Q14526 733 aa4.15□□□□□ -1.75
PMS1-210ENST00000424307 PUS10Q3MIT2 529 aaKnown RBP4.15□□□□□ -1.75
PMS1-210ENST00000424307 MPNDQ8N594 471 aa4.15□□□□□ -1.75
PMS1-210ENST00000424307 USP46P62068 366 aa4.14□□□□□ -1.75
PMS1-210ENST00000424307 SEMA6BQ9H3T3 888 aa4.14□□□□□ -1.75
PMS1-210ENST00000424307 DXOO77932 396 aaKnown RBP4.14□□□□□ -1.75
PMS1-210ENST00000424307 RDH13Q8NBN7 331 aa4.14□□□□□ -1.75
PMS1-210ENST00000424307 NUTM2FA1L443 756 aa4.13□□□□□ -1.75
PMS1-210ENST00000424307 SLC27A5Q9Y2P5 690 aa4.13□□□□□ -1.75
PMS1-210ENST00000424307 FMNL2Q96PY5 1086 aa4.13□□□□□ -1.75
PMS1-210ENST00000424307 SMYD5Q6GMV2 418 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 SV2AQ7L0J3 742 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 METTL3Q86U44 580 aaKnown RBP4.12□□□□□ -1.75
PMS1-210ENST00000424307 PRDM9Q9NQV7 894 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 PLEKHG3A1L390 1219 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 UPP2O95045 317 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 LRRC4BQ9NT99 713 aa4.12□□□□□ -1.75
PMS1-210ENST00000424307 FUT2Q10981 343 aa4.11□□□□□ -1.75
PMS1-210ENST00000424307 NEDD1Q8NHV4 660 aa4.11□□□□□ -1.75
PMS1-210ENST00000424307 USB1Q9BQ65 265 aaKnown RBP4.11□□□□□ -1.75
PMS1-210ENST00000424307 TIMP2P16035 220 aa4.1□□□□□ -1.75
PMS1-210ENST00000424307 FECHP22830 423 aa4.1□□□□□ -1.75
PMS1-210ENST00000424307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.1□□□□□ -1.75
PMS1-210ENST00000424307 EHBP1Q8NDI1 1231 aa4.1□□□□□ -1.75
PMS1-210ENST00000424307 SOS2Q07890 1332 aaPredicted RBP4.1□□□□□ -1.75
PMS1-210ENST00000424307 FOXD4L6Q3SYB3 417 aaPredicted RBP4.1□□□□□ -1.75
PMS1-210ENST00000424307 FOXD4L3Q6VB84 417 aaPredicted RBP4.1□□□□□ -1.75
PMS1-210ENST00000424307 P3H3Q8IVL6 736 aa4.1□□□□□ -1.75
PMS1-210ENST00000424307 ADH1CP00326 375 aa4.09□□□□□ -1.76
PMS1-210ENST00000424307 MCTP1Q6DN14 999 aa4.09□□□□□ -1.76
PMS1-210ENST00000424307 KLF16Q9BXK1 252 aaPredicted RBP4.09□□□□□ -1.76
PMS1-210ENST00000424307 MLLT3P42568 568 aaPredicted RBP4.08□□□□□ -1.76
PMS1-210ENST00000424307 DDX11L8A8MPP1 907 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 PIK3R2O00459 728 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 BCRP11274 1271 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 JUNDP17535 347 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 PTSQ03393 145 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 VWA5B2Q8N398 1253 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 DNMT3LQ9UJW3 386 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 GNPATO15228 680 aa4.07□□□□□ -1.76
PMS1-210ENST00000424307 WDR4P57081 412 aaKnown RBP4.07□□□□□ -1.76
PMS1-210ENST00000424307 NNTQ13423 1086 aa4.06□□□□□ -1.76
PMS1-210ENST00000424307 CCDC155Q8N6L0 562 aa4.06□□□□□ -1.76
PMS1-210ENST00000424307 VARSP26640 1264 aaKnown RBP4.06□□□□□ -1.76
PMS1-210ENST00000424307 RNF19BQ6ZMZ0 732 aa4.05□□□□□ -1.76
PMS1-210ENST00000424307 COL17A1Q9UMD9 1497 aaPredicted RBP4.05□□□□□ -1.76
PMS1-210ENST00000424307 SLC35F4A4IF30 521 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 MKL2Q9ULH7 1088 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 BMP2P12643 396 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 ITGA6P23229 1130 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 C6orf118Q5T5N4 469 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 CCDC24Q8N4L8 307 aa4.04□□□□□ -1.76
PMS1-210ENST00000424307 C1QTNF9BB2RNN3 333 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 KDM4AO75164 1064 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 CD46P15529 392 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 FAM161AQ3B820 660 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 SH3RF1Q7Z6J0 888 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 LRP8Q14114 963 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 AMER1Q5JTC6 1135 aaPredicted RBP4.03□□□□□ -1.76
PMS1-210ENST00000424307 RETREG3Q86VR2 466 aa4.03□□□□□ -1.76
PMS1-210ENST00000424307 FAM174AQ8TBP5 190 aa4.02□□□□□ -1.77
PMS1-210ENST00000424307 CDC14CA4D256 554 aa4.02□□□□□ -1.77
PMS1-210ENST00000424307 COL8A1P27658 744 aa4.02□□□□□ -1.77
PMS1-210ENST00000424307 SPTLC1O15269 473 aa4.01□□□□□ -1.77
PMS1-210ENST00000424307 PAXIP1Q6ZW49 1069 aaPredicted RBP4.01□□□□□ -1.77
PMS1-210ENST00000424307 NUDT12Q9BQG2 462 aa4.01□□□□□ -1.77
PMS1-210ENST00000424307 CCNYL3P0C7X3 344 aa4□□□□□ -1.77
PMS1-210ENST00000424307 DOC2BQ14184 412 aa4□□□□□ -1.77
PMS1-210ENST00000424307 PTPRNQ16849 979 aa4□□□□□ -1.77
PMS1-210ENST00000424307 CD163Q86VB7 1156 aa4□□□□□ -1.77
PMS1-210ENST00000424307 LINC00528Q8N1L1 170 aa4□□□□□ -1.77
PMS1-210ENST00000424307 NR5A1Q13285 461 aa4□□□□□ -1.77
PMS1-210ENST00000424307 SH3BP2P78314 561 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 DESI1Q6ICB0 168 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 KCNV2Q8TDN2 545 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 CDK15Q96Q40 435 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 MBIPQ9NS73 344 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 SPDYE5A6NIY4 337 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 HOXA2O43364 376 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 MS4A1P11836 297 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 GAS6Q14393 721 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 CFAP44Q96MT7 982 aa3.99□□□□□ -1.77
PMS1-210ENST00000424307 EVA1BQ9NVM1 165 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms