RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 NBPF1Q3BBV0 1214 aa26.77■■□□□ 1.88
SREBF1-206ENST00000423161 CDK19Q9BWU1 502 aa26.77■■□□□ 1.88
SREBF1-206ENST00000423161 PHRF1Q9P1Y6 1649 aaKnown RBP26.76■■□□□ 1.87
SREBF1-206ENST00000423161 CCDC125Q86Z20 511 aa26.75■■□□□ 1.87
SREBF1-206ENST00000423161 SEPT12Q8IYM1 358 aa26.74■■□□□ 1.87
SREBF1-206ENST00000423161 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
SREBF1-206ENST00000423161 BTG4Q9NY30 223 aa26.73■■□□□ 1.87
SREBF1-206ENST00000423161 POLR3AO14802 1390 aaPredicted RBP26.71■■□□□ 1.87
SREBF1-206ENST00000423161 ONECUT3O60422 494 aaPredicted RBP26.7■■□□□ 1.86
SREBF1-206ENST00000423161 BLMP54132 1417 aaPredicted RBP26.69■■□□□ 1.86
SREBF1-206ENST00000423161 CCDC61Q9Y6R9 512 aa26.69■■□□□ 1.86
SREBF1-206ENST00000423161 ACEP12821 1306 aa26.68■■□□□ 1.86
SREBF1-206ENST00000423161 CENPJQ9HC77 1338 aaPredicted RBP26.68■■□□□ 1.86
SREBF1-206ENST00000423161 A0A0G2JS52 829 aa26.67■■□□□ 1.86
SREBF1-206ENST00000423161 MYT1Q01538 1121 aa26.67■■□□□ 1.86
SREBF1-206ENST00000423161 PRDM11Q9NQV5 511 aa26.67■■□□□ 1.86
SREBF1-206ENST00000423161 TRPM1Q7Z4N2 1603 aa26.67■■□□□ 1.86
SREBF1-206ENST00000423161 L3MBTL2Q969R5 705 aa26.66■■□□□ 1.86
SREBF1-206ENST00000423161 PLEKHG3A1L390 1219 aa26.65■■□□□ 1.86
SREBF1-206ENST00000423161 NBPF8Q3BBV2 869 aa26.65■■□□□ 1.86
SREBF1-206ENST00000423161 KRT27Q7Z3Y8 459 aa26.65■■□□□ 1.86
SREBF1-206ENST00000423161 KIAA0232Q92628 1395 aa26.64■■□□□ 1.86
SREBF1-206ENST00000423161 SRPK2P78362 688 aaKnown RBP26.64■■□□□ 1.86
SREBF1-206ENST00000423161 FAM98CQ17RN3 349 aaKnown RBP26.64■■□□□ 1.86
SREBF1-206ENST00000423161 NUTM2GQ5VZR2 741 aa26.63■■□□□ 1.85
SREBF1-206ENST00000423161 ZRANB1Q9UGI0 708 aa26.63■■□□□ 1.85
SREBF1-206ENST00000423161 PPIP5K1Q6PFW1 1433 aa26.63■■□□□ 1.85
SREBF1-206ENST00000423161 SIN3AQ96ST3 1273 aa26.62■■□□□ 1.85
SREBF1-206ENST00000423161 NRKQ7Z2Y5 1582 aa26.62■■□□□ 1.85
SREBF1-206ENST00000423161 SPATA31A5Q5VU36 1347 aa26.61■■□□□ 1.85
SREBF1-206ENST00000423161 SPATA31A7Q8IWB4 1347 aa26.61■■□□□ 1.85
SREBF1-206ENST00000423161 THSD7AQ9UPZ6 1657 aa26.6■■□□□ 1.85
SREBF1-206ENST00000423161 SF3B2Q13435 895 aaKnown RBP26.6■■□□□ 1.85
SREBF1-206ENST00000423161 CHRNA2Q15822 529 aa26.59■■□□□ 1.85
SREBF1-206ENST00000423161 CABP2Q9NPB3 220 aa26.59■■□□□ 1.85
SREBF1-206ENST00000423161 ZC3H6P61129 1189 aaKnown RBP26.58■■□□□ 1.85
SREBF1-206ENST00000423161 NEUROD1Q13562 356 aa26.57■■□□□ 1.84
SREBF1-206ENST00000423161 DEFB132Q7Z7B7 95 aa26.57■■□□□ 1.84
SREBF1-206ENST00000423161 ABTB2Q8N961 1025 aa26.57■■□□□ 1.84
SREBF1-206ENST00000423161 RGPD1P0DJD0 1748 aa26.54■■□□□ 1.84
SREBF1-206ENST00000423161 STRN4Q9NRL3 753 aa26.54■■□□□ 1.84
SREBF1-206ENST00000423161 USP19O94966 1318 aa26.54■■□□□ 1.84
SREBF1-206ENST00000423161 LMO7Q8WWI1 1683 aa26.54■■□□□ 1.84
SREBF1-206ENST00000423161 SPATA31A1Q5TZJ5 1347 aa26.53■■□□□ 1.84
SREBF1-206ENST00000423161 ROCK2O75116 1388 aaKnown RBP26.53■■□□□ 1.84
SREBF1-206ENST00000423161 BRD4O60885 1362 aaPredicted RBP26.52■■□□□ 1.84
SREBF1-206ENST00000423161 NLRP13Q86W25 1043 aa26.51■■□□□ 1.83
SREBF1-206ENST00000423161 USP6P35125 1406 aa26.5■■□□□ 1.83
SREBF1-206ENST00000423161 CPDO75976 1380 aa26.5■■□□□ 1.83
SREBF1-206ENST00000423161 EVC2Q86UK5 1308 aa26.5■■□□□ 1.83
SREBF1-206ENST00000423161 CABP1Q9NZU7 370 aa26.5■■□□□ 1.83
SREBF1-206ENST00000423161 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
SREBF1-206ENST00000423161 SSH2Q76I76 1423 aa26.49■■□□□ 1.83
SREBF1-206ENST00000423161 SRCAPQ6ZRS2 3230 aa26.48■■□□□ 1.83
SREBF1-206ENST00000423161 FAM182BQ5T319 152 aa26.48■■□□□ 1.83
SREBF1-206ENST00000423161 AKAP12Q02952 1782 aa26.48■■□□□ 1.83
SREBF1-206ENST00000423161 BAG6P46379 1132 aa26.47■■□□□ 1.83
SREBF1-206ENST00000423161 EVA1CP58658 441 aa26.47■■□□□ 1.83
SREBF1-206ENST00000423161 TNS1Q9HBL0 1735 aaKnown RBP26.47■■□□□ 1.83
SREBF1-206ENST00000423161 PIK3C2AO00443 1686 aa26.47■■□□□ 1.83
SREBF1-206ENST00000423161 GCP02774 474 aa26.46■■□□□ 1.83
SREBF1-206ENST00000423161 USP35Q9P2H5 1018 aa26.45■■□□□ 1.82
SREBF1-206ENST00000423161 SLIT3O75094 1523 aa26.44■■□□□ 1.82
SREBF1-206ENST00000423161 NLRP6P59044 892 aa26.42■■□□□ 1.82
SREBF1-206ENST00000423161 LARP1Q6PKG0 1096 aaKnown RBP26.42■■□□□ 1.82
SREBF1-206ENST00000423161 BARGINQ6ZT62 677 aa26.4■■□□□ 1.82
SREBF1-206ENST00000423161 COL5A2P05997 1499 aaPredicted RBP26.4■■□□□ 1.82
SREBF1-206ENST00000423161 ZBTB7CA1YPR0 619 aa26.38■■□□□ 1.81
SREBF1-206ENST00000423161 PARP4Q9UKK3 1724 aaKnown RBP26.37■■□□□ 1.81
SREBF1-206ENST00000423161 TCP11L2Q8N4U5 519 aa26.37■■□□□ 1.81
SREBF1-206ENST00000423161 COL18A1P39060 1754 aa26.37■■□□□ 1.81
SREBF1-206ENST00000423161 DISP2A7MBM2 1401 aa26.37■■□□□ 1.81
SREBF1-206ENST00000423161 EN1Q05925 392 aaPredicted RBP26.36■■□□□ 1.81
SREBF1-206ENST00000423161 FAM196AQ6ZSG2 479 aa26.36■■□□□ 1.81
SREBF1-206ENST00000423161 MON2Q7Z3U7 1717 aa26.36■■□□□ 1.81
SREBF1-206ENST00000423161 ZNF692Q9BU19 519 aaPredicted RBP26.35■■□□□ 1.81
SREBF1-206ENST00000423161 AATKQ6ZMQ8 1374 aa26.34■■□□□ 1.81
SREBF1-206ENST00000423161 RGPD5Q99666 1765 aa26.34■■□□□ 1.81
SREBF1-206ENST00000423161 THRAP3Q9Y2W1 955 aaKnown RBP26.34■■□□□ 1.81
SREBF1-206ENST00000423161 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
SREBF1-206ENST00000423161 SBNO2Q9Y2G9 1366 aa26.33■■□□□ 1.81
SREBF1-206ENST00000423161 CRB1P82279 1406 aa26.33■■□□□ 1.81
SREBF1-206ENST00000423161 PDE3BQ13370 1112 aa26.33■■□□□ 1.81
SREBF1-206ENST00000423161 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
SREBF1-206ENST00000423161 WNK3Q9BYP7 1800 aa26.32■■□□□ 1.8
SREBF1-206ENST00000423161 LRP5O75197 1615 aa26.32■■□□□ 1.8
SREBF1-206ENST00000423161 CPSF1Q10570 1443 aaKnown RBP26.32■■□□□ 1.8
SREBF1-206ENST00000423161 TRIM37O94972 964 aa26.32■■□□□ 1.8
SREBF1-206ENST00000423161 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
SREBF1-206ENST00000423161 TTC21AQ8NDW8 1320 aa26.31■■□□□ 1.8
SREBF1-206ENST00000423161 PSDA5PKW4 1024 aaPredicted RBP26.3■■□□□ 1.8
SREBF1-206ENST00000423161 KTN1Q86UP2 1357 aaKnown RBP26.3■■□□□ 1.8
SREBF1-206ENST00000423161 LRRC37A3O60309 1634 aa26.28■■□□□ 1.8
SREBF1-206ENST00000423161 EZH2Q15910 746 aaKnown RBP26.27■■□□□ 1.8
SREBF1-206ENST00000423161 RREB1Q92766 1687 aa26.26■■□□□ 1.79
SREBF1-206ENST00000423161 NFAT5O94916 1531 aa26.26■■□□□ 1.79
SREBF1-206ENST00000423161 KCNH5Q8NCM2 988 aa26.26■■□□□ 1.79
SREBF1-206ENST00000423161 USP54Q70EL1 1684 aa26.25■■□□□ 1.79
SREBF1-206ENST00000423161 SOX12O15370 315 aa26.25■■□□□ 1.79
SREBF1-206ENST00000423161 APBA3O96018 575 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms