RNA–Protein interactions for RNA: ENST00000423136.1

GAPDHP55-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 55, humanhuman

BASIC

Gene GAPDHP55, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP55-201ENST00000423136 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
GAPDHP55-201ENST00000423136 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
GAPDHP55-201ENST00000423136 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
GAPDHP55-201ENST00000423136 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
GAPDHP55-201ENST00000423136 PSME1Q06323 249 aa10.95□□□□□ -0.66
GAPDHP55-201ENST00000423136 CABLES1Q8TDN4 633 aa10.95□□□□□ -0.66
GAPDHP55-201ENST00000423136 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
GAPDHP55-201ENST00000423136 PXDNQ92626 1479 aa10.94□□□□□ -0.66
GAPDHP55-201ENST00000423136 MSH5O43196 834 aa10.94□□□□□ -0.66
GAPDHP55-201ENST00000423136 TRPC5Q9UL62 973 aaPredicted RBP10.94□□□□□ -0.66
GAPDHP55-201ENST00000423136 MYOM2P54296 1465 aa10.93□□□□□ -0.66
GAPDHP55-201ENST00000423136 RGS12O14924 1447 aa10.93□□□□□ -0.66
GAPDHP55-201ENST00000423136 SPATA31A3Q5VYP0 1347 aa10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 NRXN1Q9ULB1 1477 aa10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 KNDC1Q76NI1 1749 aa10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
GAPDHP55-201ENST00000423136 LAMC1P11047 1609 aa10.91□□□□□ -0.66
GAPDHP55-201ENST00000423136 FNBP4Q8N3X1 1017 aaPredicted RBP10.91□□□□□ -0.66
GAPDHP55-201ENST00000423136 CDK12Q9NYV4 1490 aaPredicted RBP10.9□□□□□ -0.66
GAPDHP55-201ENST00000423136 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
GAPDHP55-201ENST00000423136 ARID3AQ99856 593 aa10.9□□□□□ -0.66
GAPDHP55-201ENST00000423136 NGDNQ8NEJ9 315 aaKnown RBP10.89□□□□□ -0.67
GAPDHP55-201ENST00000423136 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
GAPDHP55-201ENST00000423136 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
GAPDHP55-201ENST00000423136 RGPD8O14715 1765 aaPredicted RBP10.89□□□□□ -0.67
GAPDHP55-201ENST00000423136 COL22A1Q8NFW1 1626 aaPredicted RBP10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 A0A0G2JS52 829 aa10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 TNS3Q68CZ2 1445 aa10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 UNC5CLQ8IV45 518 aa10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 GJD4Q96KN9 370 aaPredicted RBP10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 KIF1AQ12756 1690 aa10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 ATAD2Q6PL18 1390 aa10.88□□□□□ -0.67
GAPDHP55-201ENST00000423136 BCL9LQ86UU0 1499 aa10.87□□□□□ -0.67
GAPDHP55-201ENST00000423136 ATRNO75882 1429 aa10.87□□□□□ -0.67
GAPDHP55-201ENST00000423136 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
GAPDHP55-201ENST00000423136 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
GAPDHP55-201ENST00000423136 GPRASP1Q5JY77 1395 aa10.87□□□□□ -0.67
GAPDHP55-201ENST00000423136 PRR36Q9H6K5 1346 aa10.86□□□□□ -0.67
GAPDHP55-201ENST00000423136 ADGRB1O14514 1584 aa10.86□□□□□ -0.67
GAPDHP55-201ENST00000423136 DLC1Q96QB1 1528 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 EP400Q96L91 3159 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 NEUROD1Q13562 356 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 NUTM2GQ5VZR2 741 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 ARHGEF10O15013 1369 aa10.85□□□□□ -0.67
GAPDHP55-201ENST00000423136 ANKARQ7Z5J8 1434 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 SRCAPQ6ZRS2 3230 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 FAM83GA6ND36 823 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 NUDT16Q96DE0 195 aaKnown RBP10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 CDK19Q9BWU1 502 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 SBNO1A3KN83 1393 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 USP32Q8NFA0 1604 aa10.84□□□□□ -0.67
GAPDHP55-201ENST00000423136 RALGAPBQ86X10 1494 aa10.83□□□□□ -0.68
GAPDHP55-201ENST00000423136 EIF3AQ14152 1382 aaKnown RBP10.83□□□□□ -0.68
GAPDHP55-201ENST00000423136 STAC3Q96MF2 364 aa10.83□□□□□ -0.68
GAPDHP55-201ENST00000423136 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
GAPDHP55-201ENST00000423136 MARF1Q9Y4F3 1742 aaKnown RBP10.82□□□□□ -0.68
GAPDHP55-201ENST00000423136 HMGB1P09429 215 aaKnown RBP10.82□□□□□ -0.68
GAPDHP55-201ENST00000423136 SRPK2P78362 688 aaKnown RBP10.82□□□□□ -0.68
GAPDHP55-201ENST00000423136 SEPT12Q8IYM1 358 aa10.82□□□□□ -0.68
GAPDHP55-201ENST00000423136 SLIT2O94813 1529 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 TULP4Q9NRJ4 1543 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 VPS72Q15906 364 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 PLCD3Q8N3E9 789 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 SIN3AQ96ST3 1273 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 PRDM11Q9NQV5 511 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 ADGRB2O60241 1585 aa10.81□□□□□ -0.68
GAPDHP55-201ENST00000423136 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
GAPDHP55-201ENST00000423136 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
GAPDHP55-201ENST00000423136 ZC3H6P61129 1189 aaKnown RBP10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 SF3B2Q13435 895 aaKnown RBP10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 KCNV2Q8TDN2 545 aa10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 L3MBTL2Q969R5 705 aa10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 ACEP12821 1306 aa10.79□□□□□ -0.68
GAPDHP55-201ENST00000423136 ARHGEF28Q8N1W1 1705 aaKnown RBP10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 GLI3P10071 1580 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 ZRANB1Q9UGI0 708 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 PLCH1Q4KWH8 1693 aa10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
GAPDHP55-201ENST00000423136 ATP7BP35670 1465 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 NBPF8Q3BBV2 869 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 DEFB132Q7Z7B7 95 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 CCDC61Q9Y6R9 512 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 KIAA0232Q92628 1395 aa10.77□□□□□ -0.69
GAPDHP55-201ENST00000423136 ABCA3Q99758 1704 aa10.76□□□□□ -0.69
GAPDHP55-201ENST00000423136 TRPM3Q9HCF6 1732 aaPredicted RBP10.76□□□□□ -0.69
GAPDHP55-201ENST00000423136 EVA1CP58658 441 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms