RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 COL24A1Q17RW2 1714 aa6.57□□□□□ -1.36
ITGB1-205ENST00000423113 TESK2Q96S53 571 aa6.57□□□□□ -1.36
ITGB1-205ENST00000423113 RSPH6AQ9H0K4 717 aa6.57□□□□□ -1.36
ITGB1-205ENST00000423113 QSER1Q2KHR3 1735 aa6.57□□□□□ -1.36
ITGB1-205ENST00000423113 C1orf167Q5SNV9 1468 aa6.56□□□□□ -1.36
ITGB1-205ENST00000423113 NAP1L5Q96NT1 182 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-205ENST00000423113 PDE4CQ08493 712 aa6.56□□□□□ -1.36
ITGB1-205ENST00000423113 TONSLQ96HA7 1378 aa6.56□□□□□ -1.36
ITGB1-205ENST00000423113 PAK3O75914 559 aaPredicted RBP6.55□□□□□ -1.36
ITGB1-205ENST00000423113 BRPF3Q9ULD4 1205 aa6.55□□□□□ -1.36
ITGB1-205ENST00000423113 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-205ENST00000423113 LRP6O75581 1613 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 USP31Q70CQ4 1352 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 HAP1P54257 671 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-205ENST00000423113 FOXD1Q16676 465 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 SBF2Q86WG5 1849 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 OVOS2A0A0J9YW53 1432 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 OVOS2Q6IE36 1432 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 SBNO1A3KN83 1393 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 USP47Q96K76 1375 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.54□□□□□ -1.361e-12■□□□□ 10
ITGB1-205ENST00000423113 RGPD2P0DJD1 1756 aa6.54□□□□□ -1.36
ITGB1-205ENST00000423113 COL3A1P02461 1466 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-205ENST00000423113 DDX10Q13206 875 aaKnown RBP6.53□□□□□ -1.36
ITGB1-205ENST00000423113 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-205ENST00000423113 EID1Q9Y6B2 187 aa6.53□□□□□ -1.36
ITGB1-205ENST00000423113 RREB1Q92766 1687 aa6.53□□□□□ -1.36
ITGB1-205ENST00000423113 INSRP06213 1382 aa6.53□□□□□ -1.36
ITGB1-205ENST00000423113 CDK12Q9NYV4 1490 aaPredicted RBP6.52□□□□□ -1.37
ITGB1-205ENST00000423113 ANP32CO43423 234 aa6.52□□□□□ -1.37
ITGB1-205ENST00000423113 UBR2Q8IWV8 1755 aa6.52□□□□□ -1.37
ITGB1-205ENST00000423113 ROCK2O75116 1388 aaKnown RBP6.52□□□□□ -1.37
ITGB1-205ENST00000423113 PLEKHH1Q9ULM0 1364 aa6.52□□□□□ -1.37
ITGB1-205ENST00000423113 HNRNPUQ00839 825 aaKnown RBP eCLIP6.52□□□□□ -1.37
ITGB1-205ENST00000423113 B4GALNT3Q6L9W6 998 aa6.52□□□□□ -1.37
ITGB1-205ENST00000423113 NSD2O96028 1365 aa6.52□□□□□ -1.37
ITGB1-205ENST00000423113 NCKAP5LQ9HCH0 1330 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 TXNDC2Q86VQ3 553 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 SIN3AQ96ST3 1273 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 DLG5Q8TDM6 1919 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 ATAD2Q6PL18 1390 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 EDC4Q6P2E9 1401 aaKnown RBP6.51□□□□□ -1.37
ITGB1-205ENST00000423113 ARXQ96QS3 562 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 HSP90AA1P07900 732 aaKnown RBP6.51□□□□□ -1.37
ITGB1-205ENST00000423113 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 GLI3P10071 1580 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 SCN11AQ9UI33 1791 aa6.51□□□□□ -1.37
ITGB1-205ENST00000423113 USP6P35125 1406 aa6.5□□□□□ -1.37
ITGB1-205ENST00000423113 KTN1Q86UP2 1357 aaKnown RBP6.5□□□□□ -1.37
ITGB1-205ENST00000423113 ANKRD36BQ8N2N9 1353 aa6.5□□□□□ -1.37
ITGB1-205ENST00000423113 DISP3Q9P2K9 1392 aa6.5□□□□□ -1.37
ITGB1-205ENST00000423113 TAOK2Q9UL54 1235 aa6.5□□□□□ -1.37
ITGB1-205ENST00000423113 PLEKHG3A1L390 1219 aa6.5□□□□□ -1.37
ITGB1-205ENST00000423113 TNS1Q9HBL0 1735 aaKnown RBP6.49□□□□□ -1.37
ITGB1-205ENST00000423113 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
ITGB1-205ENST00000423113 TMEM94Q12767 1356 aa6.49□□□□□ -1.37
ITGB1-205ENST00000423113 PPM1GO15355 546 aaPredicted RBP6.49□□□□□ -1.37
ITGB1-205ENST00000423113 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
ITGB1-205ENST00000423113 PPP4R2Q9NY27 417 aa6.49□□□□□ -1.37
ITGB1-205ENST00000423113 POTEDQ86YR6 584 aa6.49□□□□□ -1.37
ITGB1-205ENST00000423113 USP19O94966 1318 aa6.49□□□□□ -1.37
ITGB1-205ENST00000423113 LY75O60449 1722 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 WASHC2AQ641Q2 1341 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 TNS3Q68CZ2 1445 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 KDM3BQ7LBC6 1761 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 RBM10P98175 930 aaKnown RBP6.48□□□□□ -1.37
ITGB1-205ENST00000423113 DCAF11Q8TEB1 546 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 BRWD3Q6RI45 1802 aa6.48□□□□□ -1.37
ITGB1-205ENST00000423113 CCDC7Q96M83 1385 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 SOS2Q07890 1332 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-205ENST00000423113 CENPJQ9HC77 1338 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-205ENST00000423113 NHSQ6T4R5 1651 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 CPDO75976 1380 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 TOGARAM1Q9Y4F4 1720 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 AATKQ6ZMQ8 1374 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 LAMB4A4D0S4 1761 aa6.47□□□□□ -1.37
ITGB1-205ENST00000423113 PDIA4P13667 645 aaKnown RBP6.46□□□□□ -1.37
ITGB1-205ENST00000423113 NBPF1Q3BBV0 1214 aa6.46□□□□□ -1.37
ITGB1-205ENST00000423113 PRR36Q9H6K5 1346 aa6.46□□□□□ -1.37
ITGB1-205ENST00000423113 COL5A3P25940 1745 aaPredicted RBP6.46□□□□□ -1.38
ITGB1-205ENST00000423113 PPIP5K1Q6PFW1 1433 aa6.46□□□□□ -1.38
ITGB1-205ENST00000423113 AMOTL2Q9Y2J4 779 aa6.46□□□□□ -1.38
ITGB1-205ENST00000423113 ITGB4P16144 1822 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 SLIT2O94813 1529 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 RTL1A6NKG5 1358 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 MSH6P52701 1360 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 HSPA2P54652 639 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 ZNF335Q9H4Z2 1342 aaPredicted RBP6.45□□□□□ -1.38
ITGB1-205ENST00000423113 PNPLA6Q8IY17 1366 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 PARD3Q8TEW0 1356 aa6.45□□□□□ -1.38
ITGB1-205ENST00000423113 PNNQ9H307 717 aaKnown RBP6.45□□□□□ -1.38
ITGB1-205ENST00000423113 WASLO00401 505 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-205ENST00000423113 GSE1Q14687 1217 aa6.44□□□□□ -1.38
ITGB1-205ENST00000423113 BCL11BQ9C0K0 894 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-205ENST00000423113 C19orf44Q9H6X5 657 aa6.44□□□□□ -1.38
ITGB1-205ENST00000423113 MRC1P22897 1456 aa6.44□□□□□ -1.38
ITGB1-205ENST00000423113 TAF1LQ8IZX4 1826 aa6.44□□□□□ -1.38
ITGB1-205ENST00000423113 BCL9O00512 1426 aa6.43□□□□□ -1.38
ITGB1-205ENST00000423113 STAG3Q9UJ98 1225 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms