RNA–Protein interactions for RNA: ENST00000422788.5

CCDC66-205, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-205ENST00000422788 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
CCDC66-205ENST00000422788 LINC01559Q495D7 138 aa9.58□□□□□ -0.88
CCDC66-205ENST00000422788 LYPD8Q6UX82 237 aa9.58□□□□□ -0.88
CCDC66-205ENST00000422788 ZFP42Q96MM3 310 aa9.58□□□□□ -0.88
CCDC66-205ENST00000422788 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
CCDC66-205ENST00000422788 LORP23490 312 aaPredicted RBP9.57□□□□□ -0.88
CCDC66-205ENST00000422788 NNTQ13423 1086 aa9.57□□□□□ -0.88
CCDC66-205ENST00000422788 GMPRP36959 345 aa9.56□□□□□ -0.88
CCDC66-205ENST00000422788 RSBN1LQ6PCB5 846 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-205ENST00000422788 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
CCDC66-205ENST00000422788 TBC1D2Q9BYX2 928 aa9.56□□□□□ -0.88
CCDC66-205ENST00000422788 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
CCDC66-205ENST00000422788 CDK15Q96Q40 435 aa9.55□□□□□ -0.88
CCDC66-205ENST00000422788 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
CCDC66-205ENST00000422788 SPTLC1O15269 473 aa9.54□□□□□ -0.88
CCDC66-205ENST00000422788 ADH1CP00326 375 aa9.54□□□□□ -0.88
CCDC66-205ENST00000422788 TIMP2P16035 220 aa9.54□□□□□ -0.88
CCDC66-205ENST00000422788 MRPL14Q6P1L8 145 aaKnown RBP9.54□□□□□ -0.88
CCDC66-205ENST00000422788 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
CCDC66-205ENST00000422788 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
CCDC66-205ENST00000422788 FAM174AQ8TBP5 190 aa9.53□□□□□ -0.88
CCDC66-205ENST00000422788 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
CCDC66-205ENST00000422788 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
CCDC66-205ENST00000422788 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
CCDC66-205ENST00000422788 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
CCDC66-205ENST00000422788 ERBB4Q15303 1308 aa9.52□□□□□ -0.89
CCDC66-205ENST00000422788 HRCP23327 699 aa9.51□□□□□ -0.89
CCDC66-205ENST00000422788 WDR4P57081 412 aaKnown RBP9.51□□□□□ -0.89
CCDC66-205ENST00000422788 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
CCDC66-205ENST00000422788 CTHP32929 405 aa9.5□□□□□ -0.89
CCDC66-205ENST00000422788 VEGFBP49765 207 aa9.5□□□□□ -0.89
CCDC66-205ENST00000422788 SCARF1Q14162 830 aa9.5□□□□□ -0.89
CCDC66-205ENST00000422788 NR5A1Q13285 461 aa9.49□□□□□ -0.89
CCDC66-205ENST00000422788 VSIG8P0DPA2 414 aa9.48□□□□□ -0.89
CCDC66-205ENST00000422788 FOXJ1Q92949 421 aa9.48□□□□□ -0.89
CCDC66-205ENST00000422788 PURBQ96QR8 312 aaKnown RBP9.48□□□□□ -0.89
CCDC66-205ENST00000422788 MAP10Q9P2G4 905 aa9.48□□□□□ -0.89
CCDC66-205ENST00000422788 TRIM66O15016 1216 aa9.47□□□□□ -0.89
CCDC66-205ENST00000422788 GRM5P41594 1212 aa9.47□□□□□ -0.89
CCDC66-205ENST00000422788 RIC3Q7Z5B4 369 aa9.47□□□□□ -0.89
CCDC66-205ENST00000422788 TUSC1Q2TAM9 212 aa9.46□□□□□ -0.9
CCDC66-205ENST00000422788 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
CCDC66-205ENST00000422788 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
CCDC66-205ENST00000422788 PER1O15534 1290 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-205ENST00000422788 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-205ENST00000422788 NR3C2P08235 984 aa9.44□□□□□ -0.9
CCDC66-205ENST00000422788 ITPKCQ96DU7 683 aa9.44□□□□□ -0.9
CCDC66-205ENST00000422788 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
CCDC66-205ENST00000422788 CABLES1Q8TDN4 633 aa9.43□□□□□ -0.9
CCDC66-205ENST00000422788 AK7Q96M32 723 aa9.43□□□□□ -0.9
CCDC66-205ENST00000422788 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
CCDC66-205ENST00000422788 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
CCDC66-205ENST00000422788 SH3RF1Q7Z6J0 888 aa9.42□□□□□ -0.9
CCDC66-205ENST00000422788 SOBPA7XYQ1 873 aa9.41□□□□□ -0.9
CCDC66-205ENST00000422788 ARMC2Q8NEN0 867 aa9.41□□□□□ -0.9
CCDC66-205ENST00000422788 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
CCDC66-205ENST00000422788 LILRB3O75022 631 aa9.4□□□□□ -0.9
CCDC66-205ENST00000422788 AGERQ15109 404 aa9.4□□□□□ -0.9
CCDC66-205ENST00000422788 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
CCDC66-205ENST00000422788 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
CCDC66-205ENST00000422788 QPCTQ16769 361 aa9.39□□□□□ -0.91
CCDC66-205ENST00000422788 MEIOBQ8N635 442 aa9.39□□□□□ -0.91
CCDC66-205ENST00000422788 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
CCDC66-205ENST00000422788 MAN1A2O60476 641 aa9.38□□□□□ -0.91
CCDC66-205ENST00000422788 CSPP1Q1MSJ5 1256 aa9.38□□□□□ -0.91
CCDC66-205ENST00000422788 SH3BP5LQ7L8J4 393 aa9.38□□□□□ -0.91
CCDC66-205ENST00000422788 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
CCDC66-205ENST00000422788 UPP2O95045 317 aa9.37□□□□□ -0.91
CCDC66-205ENST00000422788 SOS2Q07890 1332 aaPredicted RBP9.36□□□□□ -0.91
CCDC66-205ENST00000422788 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
CCDC66-205ENST00000422788 NBPF14Q5TI25 921 aa9.36□□□□□ -0.91
CCDC66-205ENST00000422788 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-205ENST00000422788 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-205ENST00000422788 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
CCDC66-205ENST00000422788 PPFIA3O75145 1194 aa9.35□□□□□ -0.91
CCDC66-205ENST00000422788 BMP2P12643 396 aa9.35□□□□□ -0.91
CCDC66-205ENST00000422788 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-205ENST00000422788 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
CCDC66-205ENST00000422788 PDE4DQ08499 809 aa9.34□□□□□ -0.91
CCDC66-205ENST00000422788 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
CCDC66-205ENST00000422788 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
CCDC66-205ENST00000422788 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
CCDC66-205ENST00000422788 FSHRP23945 695 aa9.33□□□□□ -0.92
CCDC66-205ENST00000422788 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
CCDC66-205ENST00000422788 DNMT3LQ9UJW3 386 aa9.33□□□□□ -0.92
CCDC66-205ENST00000422788 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
CCDC66-205ENST00000422788 VASH1Q7L8A9 365 aaPredicted RBP9.32□□□□□ -0.92
CCDC66-205ENST00000422788 TSC1Q92574 1164 aa9.32□□□□□ -0.92
CCDC66-205ENST00000422788 CCDC116Q8IYX3 515 aa9.31□□□□□ -0.92
CCDC66-205ENST00000422788 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
CCDC66-205ENST00000422788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.29□□□□□ -0.92
CCDC66-205ENST00000422788 Q6ZVU0 165 aa9.29□□□□□ -0.92
CCDC66-205ENST00000422788 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
CCDC66-205ENST00000422788 ERFEQ4G0M1 354 aa9.28□□□□□ -0.92
CCDC66-205ENST00000422788 RSPH6AQ9H0K4 717 aa9.28□□□□□ -0.92
CCDC66-205ENST00000422788 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
CCDC66-205ENST00000422788 PDXDC2PQ6P474 469 aa9.27□□□□□ -0.93
CCDC66-205ENST00000422788 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
CCDC66-205ENST00000422788 GSK3AP49840 483 aa9.26□□□□□ -0.93
CCDC66-205ENST00000422788 PPP1R26Q5T8A7 1209 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms