RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 FANCAO15360 1455 aa12.98□□□□□ -0.33
SEMA4D-208ENST00000422704 BECN2A8MW95 431 aa12.98□□□□□ -0.33
SEMA4D-208ENST00000422704 REC8O95072 547 aa12.98□□□□□ -0.33
SEMA4D-208ENST00000422704 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
SEMA4D-208ENST00000422704 PTMSP20962 102 aa12.98□□□□□ -0.33
SEMA4D-208ENST00000422704 ZFYVE16Q7Z3T8 1539 aa12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 APPP05067 770 aa12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 MSH5O43196 834 aa12.97□□□□□ -0.33
SEMA4D-208ENST00000422704 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
SEMA4D-208ENST00000422704 INO80Q9ULG1 1556 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-208ENST00000422704 NLRP6P59044 892 aa12.96□□□□□ -0.33
SEMA4D-208ENST00000422704 BACH2Q9BYV9 841 aa12.96□□□□□ -0.34
SEMA4D-208ENST00000422704 UHRF1BP1Q6BDS2 1440 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 PSME1Q06323 249 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 GOLGA6L19H0YKK7 550 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 NEK4P51957 841 aa12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 THUMPD2Q9BTF0 503 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-208ENST00000422704 ADGRL1O94910 1474 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 HDAC5Q9UQL6 1122 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 TRAK2O60296 914 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 ATP7AQ04656 1500 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 NEXNQ0ZGT2 675 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 CAVIN1Q6NZI2 390 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
SEMA4D-208ENST00000422704 GNAI1P63096 354 aa12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 NOB1Q9ULX3 412 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 ATP10AO60312 1499 aa12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
SEMA4D-208ENST00000422704 RAD21O60216 631 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 PHF14O94880 888 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 FAM69CQ0P6D2 419 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 DEPDC5O75140 1603 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
SEMA4D-208ENST00000422704 SKOR2Q2VWA4 1001 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 FAM43AQ8N2R8 423 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 PRPF40AO75400 957 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 EVA1CP58658 441 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 VPS53Q5VIR6 699 aa12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-208ENST00000422704 TPM4P67936 248 aa12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 SCAPERQ9BY12 1400 aa12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 CPLX1O14810 134 aa12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 TWISTNBQ3B726 338 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-208ENST00000422704 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.35
SEMA4D-208ENST00000422704 STK11IPQ8N1F8 1099 aa12.9□□□□□ -0.35
SEMA4D-208ENST00000422704 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.35
SEMA4D-208ENST00000422704 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.35
SEMA4D-208ENST00000422704 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 NOC3LQ8WTT2 800 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 R3HCC1Q9Y3T6 440 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 MTMR7Q9Y216 660 aa12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-208ENST00000422704 MARCH6O60337 910 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 MIS18AQ9NYP9 233 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 FMNL2Q96PY5 1086 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 CD109Q6YHK3 1445 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 FIBPO43427 364 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 RAPGEF3O95398 923 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 RUFY2Q8WXA3 655 aa12.88□□□□□ -0.35
SEMA4D-208ENST00000422704 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 NEO1Q92859 1461 aa12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 CDC45O75419 566 aa12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 DCTN1Q14203 1278 aa12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 TPD52L1Q16890 204 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-208ENST00000422704 TET3O43151 1660 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 G3V3G9 751 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
SEMA4D-208ENST00000422704 NUCB2P80303 420 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms