RNA–Protein interactions for RNA: ENST00000422459.1

SMIM25-202, Transcript of small integral membrane protein 25, humanhuman

TSL 2

Gene SMIM25, Length 1,058 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM25-202ENST00000422459 USP31Q70CQ4 1352 aa11.99□□□□□ -0.49
SMIM25-202ENST00000422459 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
SMIM25-202ENST00000422459 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
SMIM25-202ENST00000422459 STRCQ7RTU9 1775 aa11.97□□□□□ -0.49
SMIM25-202ENST00000422459 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
SMIM25-202ENST00000422459 TTC21AQ8NDW8 1320 aa11.96□□□□□ -0.49
SMIM25-202ENST00000422459 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
SMIM25-202ENST00000422459 NME9Q86XW9 330 aa11.96□□□□□ -0.49
SMIM25-202ENST00000422459 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
SMIM25-202ENST00000422459 RGPD8O14715 1765 aaPredicted RBP11.96□□□□□ -0.49
SMIM25-202ENST00000422459 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
SMIM25-202ENST00000422459 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMIM25-202ENST00000422459 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
SMIM25-202ENST00000422459 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
SMIM25-202ENST00000422459 CDK12Q9NYV4 1490 aaPredicted RBP11.95□□□□□ -0.5
SMIM25-202ENST00000422459 DCCP43146 1447 aa11.94□□□□□ -0.5
SMIM25-202ENST00000422459 RNF123Q5XPI4 1314 aa11.94□□□□□ -0.5
SMIM25-202ENST00000422459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMIM25-202ENST00000422459 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
SMIM25-202ENST00000422459 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
SMIM25-202ENST00000422459 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
SMIM25-202ENST00000422459 MARF1Q9Y4F3 1742 aaKnown RBP11.93□□□□□ -0.5
SMIM25-202ENST00000422459 PIK3C2AO00443 1686 aa11.93□□□□□ -0.5
SMIM25-202ENST00000422459 MST1RQ04912 1400 aa11.93□□□□□ -0.5
SMIM25-202ENST00000422459 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
SMIM25-202ENST00000422459 HSPA2P54652 639 aa11.92□□□□□ -0.5
SMIM25-202ENST00000422459 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
SMIM25-202ENST00000422459 COG3Q96JB2 828 aa11.91□□□□□ -0.5
SMIM25-202ENST00000422459 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
SMIM25-202ENST00000422459 NUTM2FA1L443 756 aa11.9□□□□□ -0.5
SMIM25-202ENST00000422459 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
SMIM25-202ENST00000422459 C19orf44Q9H6X5 657 aa11.9□□□□□ -0.5
SMIM25-202ENST00000422459 TMEM94Q12767 1356 aa11.9□□□□□ -0.5
SMIM25-202ENST00000422459 C1orf167Q5SNV9 1468 aa11.89□□□□□ -0.51
SMIM25-202ENST00000422459 MAP2P11137 1827 aaKnown RBP11.89□□□□□ -0.51
SMIM25-202ENST00000422459 CCDC27Q2M243 656 aa11.89□□□□□ -0.51
SMIM25-202ENST00000422459 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
SMIM25-202ENST00000422459 PMFBP1Q8TBY8 1022 aa11.89□□□□□ -0.51
SMIM25-202ENST00000422459 RUNDC1Q96C34 613 aa11.89□□□□□ -0.51
SMIM25-202ENST00000422459 APAF1O14727 1248 aa11.88□□□□□ -0.51
SMIM25-202ENST00000422459 FBLN1P23142 703 aa11.88□□□□□ -0.51
SMIM25-202ENST00000422459 IL13P35225 146 aa11.88□□□□□ -0.51
SMIM25-202ENST00000422459 NGDNQ8NEJ9 315 aaKnown RBP11.88□□□□□ -0.51
SMIM25-202ENST00000422459 KIF24Q5T7B8 1368 aa11.88□□□□□ -0.51
SMIM25-202ENST00000422459 PEAK1Q9H792 1746 aa11.88□□□□□ -0.51
SMIM25-202ENST00000422459 XIRP1Q702N8 1843 aaKnown RBP11.88□□□□□ -0.51
SMIM25-202ENST00000422459 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
SMIM25-202ENST00000422459 TRPM3Q9HCF6 1732 aaPredicted RBP11.87□□□□□ -0.51
SMIM25-202ENST00000422459 DIAPH1O60610 1272 aaKnown RBP11.87□□□□□ -0.51
SMIM25-202ENST00000422459 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
SMIM25-202ENST00000422459 EMILIN1Q9Y6C2 1016 aa11.87□□□□□ -0.51
SMIM25-202ENST00000422459 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
SMIM25-202ENST00000422459 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
SMIM25-202ENST00000422459 CDCA7LQ96GN5 454 aa11.86□□□□□ -0.51
SMIM25-202ENST00000422459 FCHSD2O94868 740 aa11.85□□□□□ -0.51
SMIM25-202ENST00000422459 SLFN5Q08AF3 891 aa11.85□□□□□ -0.51
SMIM25-202ENST00000422459 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
SMIM25-202ENST00000422459 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
SMIM25-202ENST00000422459 PHRF1Q9P1Y6 1649 aaKnown RBP11.85□□□□□ -0.51
SMIM25-202ENST00000422459 SLIT3O75094 1523 aa11.85□□□□□ -0.51
SMIM25-202ENST00000422459 NFAT5O94916 1531 aa11.85□□□□□ -0.51
SMIM25-202ENST00000422459 TCP11L2Q8N4U5 519 aa11.84□□□□□ -0.51
SMIM25-202ENST00000422459 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
SMIM25-202ENST00000422459 SBNO1A3KN83 1393 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
SMIM25-202ENST00000422459 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMIM25-202ENST00000422459 GOLGA2Q08379 1002 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 ERICH6BQ5W0A0 696 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 ORAI2Q96SN7 254 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 MAP3K19Q56UN5 1328 aa11.83□□□□□ -0.52
SMIM25-202ENST00000422459 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
SMIM25-202ENST00000422459 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
SMIM25-202ENST00000422459 ESCO1Q5FWF5 840 aa11.82□□□□□ -0.52
SMIM25-202ENST00000422459 WDR63Q8IWG1 891 aa11.82□□□□□ -0.52
SMIM25-202ENST00000422459 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
SMIM25-202ENST00000422459 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
SMIM25-202ENST00000422459 USP19O94966 1318 aa11.82□□□□□ -0.52
SMIM25-202ENST00000422459 ALS2Q96Q42 1657 aa11.81□□□□□ -0.52
SMIM25-202ENST00000422459 RTL1A6NKG5 1358 aa11.81□□□□□ -0.52
SMIM25-202ENST00000422459 FLT4P35916 1363 aa11.81□□□□□ -0.52
SMIM25-202ENST00000422459 CADPS2Q86UW7 1296 aa11.81□□□□□ -0.52
SMIM25-202ENST00000422459 KDRP35968 1356 aa11.8□□□□□ -0.52
SMIM25-202ENST00000422459 E9PSI1 815 aa11.8□□□□□ -0.52
SMIM25-202ENST00000422459 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
SMIM25-202ENST00000422459 NLRP6P59044 892 aa11.8□□□□□ -0.52
SMIM25-202ENST00000422459 EIF4A2Q14240 407 aaKnown RBP11.8□□□□□ -0.52
SMIM25-202ENST00000422459 PNNQ9H307 717 aaKnown RBP11.8□□□□□ -0.52
SMIM25-202ENST00000422459 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
SMIM25-202ENST00000422459 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
SMIM25-202ENST00000422459 MSH6P52701 1360 aa11.79□□□□□ -0.52
SMIM25-202ENST00000422459 PXDNQ92626 1479 aa11.79□□□□□ -0.52
SMIM25-202ENST00000422459 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
SMIM25-202ENST00000422459 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
SMIM25-202ENST00000422459 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
SMIM25-202ENST00000422459 U2SURPO15042 1029 aaKnown RBP11.78□□□□□ -0.52
SMIM25-202ENST00000422459 ATF3P18847 181 aa11.78□□□□□ -0.52
SMIM25-202ENST00000422459 PSME1Q06323 249 aa11.78□□□□□ -0.52
SMIM25-202ENST00000422459 FKBP8Q14318 412 aa11.78□□□□□ -0.52
SMIM25-202ENST00000422459 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms