RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 NRKQ7Z2Y5 1582 aa27.03■■□□□ 1.92
GCDH-202ENST00000421816 NUTM2AQ8IVF1 878 aaPredicted RBP27.03■■□□□ 1.92
GCDH-202ENST00000421816 ABCA3Q99758 1704 aa27.03■■□□□ 1.92
GCDH-202ENST00000421816 SLC12A5Q9H2X9 1139 aa27.03■■□□□ 1.92
GCDH-202ENST00000421816 PAK3O75914 559 aaPredicted RBP27.02■■□□□ 1.92
GCDH-202ENST00000421816 TMC1Q8TDI8 760 aa27.02■■□□□ 1.92
GCDH-202ENST00000421816 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
GCDH-202ENST00000421816 LMOD2Q6P5Q4 547 aa27.01■■□□□ 1.91
GCDH-202ENST00000421816 MYOM1P52179 1685 aa27.01■■□□□ 1.91
GCDH-202ENST00000421816 MARF1Q9Y4F3 1742 aaKnown RBP26.99■■□□□ 1.91
GCDH-202ENST00000421816 KTN1Q86UP2 1357 aaKnown RBP26.99■■□□□ 1.91
GCDH-202ENST00000421816 TERF2IPQ9NYB0 399 aa26.97■■□□□ 1.91
GCDH-202ENST00000421816 A0A1W2PP64 1363 aa26.97■■□□□ 1.91
GCDH-202ENST00000421816 HDGFL2Q7Z4V5 671 aaPredicted RBP26.96■■□□□ 1.91
GCDH-202ENST00000421816 PIK3C2AO00443 1686 aa26.95■■□□□ 1.91
GCDH-202ENST00000421816 CABLES1Q8TDN4 633 aa26.95■■□□□ 1.9
GCDH-202ENST00000421816 TTC21BQ7Z4L5 1316 aa26.94■■□□□ 1.9
GCDH-202ENST00000421816 MEX3CQ5U5Q3 659 aaKnown RBP26.94■■□□□ 1.9
GCDH-202ENST00000421816 ABTB2Q8N961 1025 aa26.94■■□□□ 1.9
GCDH-202ENST00000421816 ANKRD36BQ8N2N9 1353 aa26.94■■□□□ 1.9
GCDH-202ENST00000421816 PHRF1Q9P1Y6 1649 aaKnown RBP26.94■■□□□ 1.9
GCDH-202ENST00000421816 TTC21AQ8NDW8 1320 aa26.92■■□□□ 1.9
GCDH-202ENST00000421816 EDC4Q6P2E9 1401 aaKnown RBP26.92■■□□□ 1.9
GCDH-202ENST00000421816 C11orf95C9JLR9 678 aaPredicted RBP26.92■■□□□ 1.9
GCDH-202ENST00000421816 ADAMTS2O95450 1211 aa26.92■■□□□ 1.9
GCDH-202ENST00000421816 NUTM2GQ5VZR2 741 aa26.9■■□□□ 1.9
GCDH-202ENST00000421816 PHF23Q9BUL5 403 aaPredicted RBP26.9■■□□□ 1.9
GCDH-202ENST00000421816 USP19O94966 1318 aa26.9■■□□□ 1.9
GCDH-202ENST00000421816 RGS17Q9UGC6 210 aaPredicted RBP26.89■■□□□ 1.9
GCDH-202ENST00000421816 PLEKHG5O94827 1062 aa26.88■■□□□ 1.89
GCDH-202ENST00000421816 NLRP13Q86W25 1043 aa26.88■■□□□ 1.89
GCDH-202ENST00000421816 USP54Q70EL1 1684 aa26.88■■□□□ 1.89
GCDH-202ENST00000421816 ZEB1P37275 1124 aaPredicted RBP26.87■■□□□ 1.89
GCDH-202ENST00000421816 HAP1P54257 671 aaPredicted RBP26.87■■□□□ 1.89
GCDH-202ENST00000421816 C8orf37Q96NL8 207 aa26.87■■□□□ 1.89
GCDH-202ENST00000421816 SLIT3O75094 1523 aa26.85■■□□□ 1.89
GCDH-202ENST00000421816 NLRP6P59044 892 aa26.85■■□□□ 1.89
GCDH-202ENST00000421816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.84■■□□□ 1.89
GCDH-202ENST00000421816 POLR3GLQ9BT43 218 aa26.84■■□□□ 1.89
GCDH-202ENST00000421816 AFF2P51816 1311 aa26.84■■□□□ 1.89
GCDH-202ENST00000421816 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
GCDH-202ENST00000421816 NGLY1Q96IV0 654 aa26.83■■□□□ 1.89
GCDH-202ENST00000421816 KIF7Q2M1P5 1343 aa26.83■■□□□ 1.89
GCDH-202ENST00000421816 FNBP4Q8N3X1 1017 aaPredicted RBP26.82■■□□□ 1.88
GCDH-202ENST00000421816 NME9Q86XW9 330 aa26.81■■□□□ 1.88
GCDH-202ENST00000421816 SLIT2O94813 1529 aa26.8■■□□□ 1.88
GCDH-202ENST00000421816 PLCH1Q4KWH8 1693 aa26.8■■□□□ 1.88
GCDH-202ENST00000421816 COL14A1Q05707 1796 aaKnown RBP26.8■■□□□ 1.88
GCDH-202ENST00000421816 GCP02774 474 aa26.79■■□□□ 1.88
GCDH-202ENST00000421816 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
GCDH-202ENST00000421816 CARD14Q9BXL6 1004 aa26.79■■□□□ 1.88
GCDH-202ENST00000421816 NWD2Q9ULI1 1742 aa26.79■■□□□ 1.88
GCDH-202ENST00000421816 FAM83GA6ND36 823 aa26.78■■□□□ 1.88
GCDH-202ENST00000421816 ZRANB1Q9UGI0 708 aa26.78■■□□□ 1.88
GCDH-202ENST00000421816 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.77■■□□□ 1.88
GCDH-202ENST00000421816 BCL9LQ86UU0 1499 aa26.77■■□□□ 1.88
GCDH-202ENST00000421816 KIF20BQ96Q89 1820 aa26.76■■□□□ 1.88
GCDH-202ENST00000421816 OVOS2A0A0J9YW53 1432 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 OVOS2Q6IE36 1432 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 CPDO75976 1380 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 KIAA0232Q92628 1395 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 CCDC7Q96M83 1385 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
GCDH-202ENST00000421816 NSD3Q9BZ95 1437 aa26.75■■□□□ 1.87
GCDH-202ENST00000421816 NFAT5O94916 1531 aa26.75■■□□□ 1.87
GCDH-202ENST00000421816 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
GCDH-202ENST00000421816 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
GCDH-202ENST00000421816 USP21Q9UK80 565 aa26.74■■□□□ 1.87
GCDH-202ENST00000421816 KCNH5Q8NCM2 988 aa26.73■■□□□ 1.87
GCDH-202ENST00000421816 PRDM11Q9NQV5 511 aa26.73■■□□□ 1.87
GCDH-202ENST00000421816 NRAPQ86VF7 1730 aa26.73■■□□□ 1.87
GCDH-202ENST00000421816 FYB1O15117 783 aa26.72■■□□□ 1.87
GCDH-202ENST00000421816 PANK3Q9H999 370 aa26.72■■□□□ 1.87
GCDH-202ENST00000421816 LMO7Q8WWI1 1683 aa26.71■■□□□ 1.87
GCDH-202ENST00000421816 ATRNO75882 1429 aa26.7■■□□□ 1.86
GCDH-202ENST00000421816 UNC5CLQ8IV45 518 aa26.69■■□□□ 1.86
GCDH-202ENST00000421816 CHRNA2Q15822 529 aa26.68■■□□□ 1.86
GCDH-202ENST00000421816 QTRT2Q9H974 415 aaKnown RBP26.68■■□□□ 1.86
GCDH-202ENST00000421816 COL18A1P39060 1754 aa26.68■■□□□ 1.86
GCDH-202ENST00000421816 COG3Q96JB2 828 aa26.67■■□□□ 1.86
GCDH-202ENST00000421816 BTG4Q9NY30 223 aa26.67■■□□□ 1.86
GCDH-202ENST00000421816 ARHGEF25Q86VW2 580 aa26.66■■□□□ 1.86
GCDH-202ENST00000421816 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
GCDH-202ENST00000421816 TRPC5Q9UL62 973 aaPredicted RBP26.66■■□□□ 1.86
GCDH-202ENST00000421816 AATKQ6ZMQ8 1374 aa26.65■■□□□ 1.86
GCDH-202ENST00000421816 CAMTA1Q9Y6Y1 1673 aa26.65■■□□□ 1.86
GCDH-202ENST00000421816 CGNL1Q0VF96 1302 aa26.65■■□□□ 1.86
GCDH-202ENST00000421816 LTN1O94822 1766 aa26.64■■□□□ 1.86
GCDH-202ENST00000421816 SOX12O15370 315 aa26.64■■□□□ 1.86
GCDH-202ENST00000421816 ANKRD26Q9UPS8 1709 aa26.64■■□□□ 1.85
GCDH-202ENST00000421816 ILDR2Q71H61 639 aa26.63■■□□□ 1.85
GCDH-202ENST00000421816 ABCC6O95255 1503 aa26.63■■□□□ 1.85
GCDH-202ENST00000421816 VPS72Q15906 364 aa26.61■■□□□ 1.85
GCDH-202ENST00000421816 RXRBP28702 533 aa26.6■■□□□ 1.85
GCDH-202ENST00000421816 RBM6P78332 1123 aaKnown RBP26.6■■□□□ 1.85
GCDH-202ENST00000421816 GLI3P10071 1580 aa26.59■■□□□ 1.85
GCDH-202ENST00000421816 RGPD5Q99666 1765 aa26.59■■□□□ 1.85
GCDH-202ENST00000421816 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
GCDH-202ENST00000421816 COL5A2P05997 1499 aaPredicted RBP26.57■■□□□ 1.84
GCDH-202ENST00000421816 CDK12Q9NYV4 1490 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms