RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.05
LEMD2-202ENST00000421671 MED14O60244 1454 aa27.88■■■□□ 2.05
LEMD2-202ENST00000421671 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
LEMD2-202ENST00000421671 COL3A1P02461 1466 aaPredicted RBP27.87■■■□□ 2.05
LEMD2-202ENST00000421671 ADGRB2O60241 1585 aa27.87■■■□□ 2.05
LEMD2-202ENST00000421671 WAPLQ7Z5K2 1190 aa27.86■■■□□ 2.05
LEMD2-202ENST00000421671 FAM43AQ8N2R8 423 aa27.86■■■□□ 2.05
LEMD2-202ENST00000421671 U2AF1L5P0DN76 240 aaPredicted RBP27.85■■■□□ 2.05
LEMD2-202ENST00000421671 U2AF1Q01081 240 aaKnown RBP eCLIP27.85■■■□□ 2.05
LEMD2-202ENST00000421671 CCDC27Q2M243 656 aa27.84■■■□□ 2.05
LEMD2-202ENST00000421671 CABP1Q9NZU7 370 aa27.84■■■□□ 2.05
LEMD2-202ENST00000421671 KIF20BQ96Q89 1820 aa27.84■■■□□ 2.05
LEMD2-202ENST00000421671 WDR63Q8IWG1 891 aa27.84■■■□□ 2.05
LEMD2-202ENST00000421671 TNRQ92752 1358 aa27.81■■■□□ 2.04
LEMD2-202ENST00000421671 CENPQQ7L2Z9 268 aaPredicted RBP27.81■■■□□ 2.04
LEMD2-202ENST00000421671 HDGFL2Q7Z4V5 671 aaPredicted RBP27.81■■■□□ 2.04
LEMD2-202ENST00000421671 SLC4A3P48751 1232 aa27.8■■■□□ 2.04
LEMD2-202ENST00000421671 NCBP3Q53F19 620 aaKnown RBP27.8■■■□□ 2.04
LEMD2-202ENST00000421671 METP08581 1390 aa27.77■■■□□ 2.04
LEMD2-202ENST00000421671 PLEKHF1Q96S99 279 aa27.77■■■□□ 2.04
LEMD2-202ENST00000421671 ATP7BP35670 1465 aa27.75■■■□□ 2.03
LEMD2-202ENST00000421671 FAM161AQ3B820 660 aa27.75■■■□□ 2.03
LEMD2-202ENST00000421671 RARSP54136 660 aaKnown RBP27.75■■■□□ 2.03
LEMD2-202ENST00000421671 PDE3AQ14432 1141 aa27.75■■■□□ 2.03
LEMD2-202ENST00000421671 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.74■■■□□ 2.03
LEMD2-202ENST00000421671 U2SURPO15042 1029 aaKnown RBP27.74■■■□□ 2.03
LEMD2-202ENST00000421671 PNPLA6Q8IY17 1366 aa27.73■■■□□ 2.03
LEMD2-202ENST00000421671 KNDC1Q76NI1 1749 aa27.72■■■□□ 2.03
LEMD2-202ENST00000421671 FRAT2O75474 233 aaPredicted RBP27.72■■■□□ 2.03
LEMD2-202ENST00000421671 PANK1Q8TE04 598 aa27.7■■■□□ 2.03
LEMD2-202ENST00000421671 UBR1Q8IWV7 1749 aa27.69■■■□□ 2.02
LEMD2-202ENST00000421671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.69■■■□□ 2.025e-8■□□□□ 9.9
LEMD2-202ENST00000421671 WASLO00401 505 aaPredicted RBP27.68■■■□□ 2.02
LEMD2-202ENST00000421671 C8orf34Q49A92 452 aa27.68■■■□□ 2.02
LEMD2-202ENST00000421671 TXNDC2Q86VQ3 553 aa27.68■■■□□ 2.02
LEMD2-202ENST00000421671 TMPOP42166 694 aaKnown RBP27.68■■■□□ 2.02
LEMD2-202ENST00000421671 MYH16Q9H6N6 1097 aa27.67■■■□□ 2.02
LEMD2-202ENST00000421671 COG6Q9Y2V7 657 aa27.67■■■□□ 2.02
LEMD2-202ENST00000421671 CPSF1Q10570 1443 aaKnown RBP27.67■■■□□ 2.02
LEMD2-202ENST00000421671 DIAPH1O60610 1272 aaKnown RBP27.67■■■□□ 2.02
LEMD2-202ENST00000421671 CANXP27824 592 aaKnown RBP27.67■■■□□ 2.02
LEMD2-202ENST00000421671 TRIM35Q9UPQ4 493 aa27.67■■■□□ 2.02
LEMD2-202ENST00000421671 TECPR2O15040 1411 aa27.66■■■□□ 2.02
LEMD2-202ENST00000421671 FBLN1P23142 703 aa27.66■■■□□ 2.02
LEMD2-202ENST00000421671 MAP2P11137 1827 aaKnown RBP27.65■■■□□ 2.02
LEMD2-202ENST00000421671 PPIP5K1Q6PFW1 1433 aa27.65■■■□□ 2.02
LEMD2-202ENST00000421671 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
LEMD2-202ENST00000421671 FAM135BQ49AJ0 1406 aa27.64■■■□□ 2.02
LEMD2-202ENST00000421671 TMEM2Q9UHN6 1383 aa27.64■■■□□ 2.02
LEMD2-202ENST00000421671 CPS1P31327 1500 aa27.64■■■□□ 2.02
LEMD2-202ENST00000421671 TNNQ9UQP3 1299 aa27.64■■■□□ 2.02
LEMD2-202ENST00000421671 IGHDP01880 384 aa27.63■■■□□ 2.01
LEMD2-202ENST00000421671 BCL2L13Q9BXK5 485 aa27.63■■■□□ 2.01
LEMD2-202ENST00000421671 POLKQ9UBT6 870 aa27.63■■■□□ 2.01
LEMD2-202ENST00000421671 LTKP29376 864 aa27.63■■■□□ 2.01
LEMD2-202ENST00000421671 SIRT1Q96EB6 747 aa27.62■■■□□ 2.01
LEMD2-202ENST00000421671 MAPK8IP3Q9UPT6 1336 aa27.62■■■□□ 2.01
LEMD2-202ENST00000421671 CLUAP1Q96AJ1 413 aa27.62■■■□□ 2.01
LEMD2-202ENST00000421671 RLBP1P12271 317 aa27.61■■■□□ 2.01
LEMD2-202ENST00000421671 TSR2Q969E8 191 aaKnown RBP27.61■■■□□ 2.01
LEMD2-202ENST00000421671 EDC4Q6P2E9 1401 aaKnown RBP27.61■■■□□ 2.01
LEMD2-202ENST00000421671 C3P01024 1663 aa27.61■■■□□ 2.01
LEMD2-202ENST00000421671 HDGFP51858 240 aaKnown RBP27.61■■■□□ 2.01
LEMD2-202ENST00000421671 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
LEMD2-202ENST00000421671 LRRC7Q96NW7 1537 aa27.6■■■□□ 2.01
LEMD2-202ENST00000421671 MON2Q7Z3U7 1717 aa27.59■■■□□ 2.01
LEMD2-202ENST00000421671 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
LEMD2-202ENST00000421671 FER1L4A9Z1Z3 1794 aa27.58■■■□□ 2.01
LEMD2-202ENST00000421671 ADAMTS13Q76LX8 1427 aa27.58■■■□□ 2
LEMD2-202ENST00000421671 NME9Q86XW9 330 aa27.57■■■□□ 2
LEMD2-202ENST00000421671 AKAP12Q02952 1782 aa27.57■■■□□ 2
LEMD2-202ENST00000421671 ZRANB1Q9UGI0 708 aa27.56■■■□□ 2
LEMD2-202ENST00000421671 RIPK4P57078 832 aa27.56■■■□□ 2
LEMD2-202ENST00000421671 EXOSC9Q06265 439 aaKnown RBP27.55■■■□□ 2
LEMD2-202ENST00000421671 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
LEMD2-202ENST00000421671 IL16Q14005 1332 aa27.55■■■□□ 2
LEMD2-202ENST00000421671 RGS3P49796 1198 aa27.55■■■□□ 2
LEMD2-202ENST00000421671 FCHSD2O94868 740 aa27.54■■■□□ 2
LEMD2-202ENST00000421671 SLC26A8Q96RN1 970 aa27.54■■■□□ 2
LEMD2-202ENST00000421671 CCDC61Q9Y6R9 512 aa27.54■■■□□ 2
LEMD2-202ENST00000421671 CT47B1P0C2W7 299 aaPredicted RBP27.53■■■□□ 2
LEMD2-202ENST00000421671 PRR36Q9H6K5 1346 aa27.53■■■□□ 2
LEMD2-202ENST00000421671 PNNQ9H307 717 aaKnown RBP27.53■■■□□ 2
LEMD2-202ENST00000421671 EMILIN1Q9Y6C2 1016 aa27.53■■■□□ 2
LEMD2-202ENST00000421671 ITSN1Q15811 1721 aa27.53■■■□□ 2
LEMD2-202ENST00000421671 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■■□□ 2
LEMD2-202ENST00000421671 PRKAR2BP31323 418 aa27.5■■□□□ 1.99
LEMD2-202ENST00000421671 L1TD1Q5T7N2 865 aaKnown RBP27.5■■□□□ 1.99
LEMD2-202ENST00000421671 PCDHB15Q9Y5E8 787 aa27.5■■□□□ 1.99
LEMD2-202ENST00000421671 AATKQ6ZMQ8 1374 aa27.49■■□□□ 1.99
LEMD2-202ENST00000421671 AAMPQ13685 434 aa27.49■■□□□ 1.99
LEMD2-202ENST00000421671 PLEKHG1Q9ULL1 1385 aa27.48■■□□□ 1.99
LEMD2-202ENST00000421671 CDK12Q9NYV4 1490 aaPredicted RBP27.48■■□□□ 1.99
LEMD2-202ENST00000421671 IL13P35225 146 aa27.47■■□□□ 1.99
LEMD2-202ENST00000421671 ZKSCAN2Q63HK3 967 aa27.47■■□□□ 1.99
LEMD2-202ENST00000421671 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
LEMD2-202ENST00000421671 PHACTR3Q96KR7 559 aa27.46■■□□□ 1.99
LEMD2-202ENST00000421671 HMOX1P09601 288 aa27.45■■□□□ 1.99
LEMD2-202ENST00000421671 GLIPR1L2Q4G1C9 344 aa27.45■■□□□ 1.99
LEMD2-202ENST00000421671 SMC4Q9NTJ3 1288 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms