RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 CDC42BPGQ6DT37 1551 aa16.18■□□□□ 0.18
LINC00443-201ENST00000421601 FYB1O15117 783 aa16.18■□□□□ 0.18
LINC00443-201ENST00000421601 ATF3P18847 181 aa16.18■□□□□ 0.18
LINC00443-201ENST00000421601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.18■□□□□ 0.18
LINC00443-201ENST00000421601 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
LINC00443-201ENST00000421601 FMN2Q9NZ56 1722 aa16.18■□□□□ 0.18
LINC00443-201ENST00000421601 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
LINC00443-201ENST00000421601 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
LINC00443-201ENST00000421601 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
LINC00443-201ENST00000421601 GGNBP2Q9H3C7 697 aa16.16■□□□□ 0.18
LINC00443-201ENST00000421601 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
LINC00443-201ENST00000421601 LRRC7Q96NW7 1537 aa16.15■□□□□ 0.18
LINC00443-201ENST00000421601 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
LINC00443-201ENST00000421601 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
LINC00443-201ENST00000421601 POLR3AO14802 1390 aaPredicted RBP16.14■□□□□ 0.17
LINC00443-201ENST00000421601 NSD2O96028 1365 aa16.14■□□□□ 0.17
LINC00443-201ENST00000421601 EDC4Q6P2E9 1401 aaKnown RBP16.14■□□□□ 0.17
LINC00443-201ENST00000421601 CADPS2Q86UW7 1296 aa16.14■□□□□ 0.17
LINC00443-201ENST00000421601 ORAI2Q96SN7 254 aa16.14■□□□□ 0.17
LINC00443-201ENST00000421601 TTC21BQ7Z4L5 1316 aa16.14■□□□□ 0.17
LINC00443-201ENST00000421601 MSH6P52701 1360 aa16.13■□□□□ 0.17
LINC00443-201ENST00000421601 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
LINC00443-201ENST00000421601 NME9Q86XW9 330 aa16.13■□□□□ 0.17
LINC00443-201ENST00000421601 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
LINC00443-201ENST00000421601 BRD4O60885 1362 aaPredicted RBP16.13■□□□□ 0.17
LINC00443-201ENST00000421601 ITSN1Q15811 1721 aa16.12■□□□□ 0.17
LINC00443-201ENST00000421601 USP6P35125 1406 aa16.11■□□□□ 0.17
LINC00443-201ENST00000421601 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
LINC00443-201ENST00000421601 AKAP12Q02952 1782 aa16.11■□□□□ 0.17
LINC00443-201ENST00000421601 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
LINC00443-201ENST00000421601 DCCP43146 1447 aa16.11■□□□□ 0.17
LINC00443-201ENST00000421601 PSME1Q06323 249 aa16.1■□□□□ 0.17
LINC00443-201ENST00000421601 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
LINC00443-201ENST00000421601 MON2Q7Z3U7 1717 aa16.09■□□□□ 0.17
LINC00443-201ENST00000421601 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
LINC00443-201ENST00000421601 PNISRQ8TF01 805 aaKnown RBP16.09■□□□□ 0.17
LINC00443-201ENST00000421601 XIRP1Q702N8 1843 aaKnown RBP16.09■□□□□ 0.17
LINC00443-201ENST00000421601 MST1RQ04912 1400 aa16.09■□□□□ 0.17
LINC00443-201ENST00000421601 FOXO3O43524 673 aa16.08■□□□□ 0.16
LINC00443-201ENST00000421601 COG3Q96JB2 828 aa16.08■□□□□ 0.16
LINC00443-201ENST00000421601 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
LINC00443-201ENST00000421601 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
LINC00443-201ENST00000421601 MTHFSP49914 203 aa16.06■□□□□ 0.16
LINC00443-201ENST00000421601 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
LINC00443-201ENST00000421601 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
LINC00443-201ENST00000421601 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
LINC00443-201ENST00000421601 FBLN1P23142 703 aa16.04■□□□□ 0.16
LINC00443-201ENST00000421601 XPCQ01831 940 aaPredicted RBP16.04■□□□□ 0.16
LINC00443-201ENST00000421601 NLRP6P59044 892 aa16.03■□□□□ 0.16
LINC00443-201ENST00000421601 ABTB2Q8N961 1025 aa16.03■□□□□ 0.16
LINC00443-201ENST00000421601 LTBP4Q8N2S1 1624 aa16.02■□□□□ 0.16
LINC00443-201ENST00000421601 NRKQ7Z2Y5 1582 aa16.02■□□□□ 0.16
LINC00443-201ENST00000421601 NUTM2GQ5VZR2 741 aa16.02■□□□□ 0.16
LINC00443-201ENST00000421601 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
LINC00443-201ENST00000421601 USP31Q70CQ4 1352 aa16.01■□□□□ 0.15
LINC00443-201ENST00000421601 BRINP3Q76B58 766 aa16.01■□□□□ 0.15
LINC00443-201ENST00000421601 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
LINC00443-201ENST00000421601 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
LINC00443-201ENST00000421601 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
LINC00443-201ENST00000421601 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
LINC00443-201ENST00000421601 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
LINC00443-201ENST00000421601 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
LINC00443-201ENST00000421601 PPM1GO15355 546 aaPredicted RBP15.98■□□□□ 0.15
LINC00443-201ENST00000421601 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
LINC00443-201ENST00000421601 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
LINC00443-201ENST00000421601 ADAMTS8Q9UP79 889 aa15.98■□□□□ 0.15
LINC00443-201ENST00000421601 NPHP3Q7Z494 1330 aa15.97■□□□□ 0.15
LINC00443-201ENST00000421601 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
LINC00443-201ENST00000421601 LMOD2Q6P5Q4 547 aa15.97■□□□□ 0.15
LINC00443-201ENST00000421601 SOX12O15370 315 aa15.96■□□□□ 0.15
LINC00443-201ENST00000421601 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
LINC00443-201ENST00000421601 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC00443-201ENST00000421601 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
LINC00443-201ENST00000421601 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
LINC00443-201ENST00000421601 PNPLA6Q8IY17 1366 aa15.93■□□□□ 0.14
LINC00443-201ENST00000421601 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
LINC00443-201ENST00000421601 MAP2P11137 1827 aaKnown RBP15.93■□□□□ 0.14
LINC00443-201ENST00000421601 INSRP06213 1382 aa15.92■□□□□ 0.14
LINC00443-201ENST00000421601 PLEKHG5O94827 1062 aa15.92■□□□□ 0.14
LINC00443-201ENST00000421601 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
LINC00443-201ENST00000421601 TRPM3Q9HCF6 1732 aaPredicted RBP15.91■□□□□ 0.14
LINC00443-201ENST00000421601 KCNH5Q8NCM2 988 aa15.91■□□□□ 0.14
LINC00443-201ENST00000421601 SOS2Q07890 1332 aaPredicted RBP15.91■□□□□ 0.14
LINC00443-201ENST00000421601 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
LINC00443-201ENST00000421601 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
LINC00443-201ENST00000421601 PXDNQ92626 1479 aa15.91■□□□□ 0.14
LINC00443-201ENST00000421601 CENPBP07199 599 aaPredicted RBP15.9■□□□□ 0.14
LINC00443-201ENST00000421601 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
LINC00443-201ENST00000421601 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
LINC00443-201ENST00000421601 U2SURPO15042 1029 aaKnown RBP15.89■□□□□ 0.13
LINC00443-201ENST00000421601 TOM1O60784 492 aa15.89■□□□□ 0.13
LINC00443-201ENST00000421601 GCP02774 474 aa15.89■□□□□ 0.13
LINC00443-201ENST00000421601 U2AF1L5P0DN76 240 aaPredicted RBP15.89■□□□□ 0.13
LINC00443-201ENST00000421601 AMPHP49418 695 aa15.89■□□□□ 0.13
LINC00443-201ENST00000421601 U2AF1Q01081 240 aaKnown RBP eCLIP15.89■□□□□ 0.13
LINC00443-201ENST00000421601 COL3A1P02461 1466 aaPredicted RBP15.89■□□□□ 0.13
LINC00443-201ENST00000421601 IL13P35225 146 aa15.88■□□□□ 0.13
LINC00443-201ENST00000421601 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
LINC00443-201ENST00000421601 USP54Q70EL1 1684 aa15.88■□□□□ 0.13
LINC00443-201ENST00000421601 USP19O94966 1318 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms