RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 PLEKHG3A1L390 1219 aa27.36■■□□□ 1.97
VARS2-202ENST00000421263 PAK3O75914 559 aaPredicted RBP27.36■■□□□ 1.97
VARS2-202ENST00000421263 CRYBG1Q9Y4K1 1723 aa27.36■■□□□ 1.97
VARS2-202ENST00000421263 BTG4Q9NY30 223 aa27.35■■□□□ 1.97
VARS2-202ENST00000421263 BRWD3Q6RI45 1802 aa27.34■■□□□ 1.97
VARS2-202ENST00000421263 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
VARS2-202ENST00000421263 COL14A1Q05707 1796 aaKnown RBP27.33■■□□□ 1.97
VARS2-202ENST00000421263 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.97
VARS2-202ENST00000421263 L3MBTL2Q969R5 705 aa27.33■■□□□ 1.97
VARS2-202ENST00000421263 CCDC9Q9Y3X0 531 aaKnown RBP27.33■■□□□ 1.97
VARS2-202ENST00000421263 ACEP12821 1306 aa27.33■■□□□ 1.97
VARS2-202ENST00000421263 TOPAZ1Q8N9V7 1692 aa27.32■■□□□ 1.96
VARS2-202ENST00000421263 CENPJQ9HC77 1338 aaPredicted RBP27.3■■□□□ 1.96
VARS2-202ENST00000421263 SIN3AQ96ST3 1273 aa27.29■■□□□ 1.96
VARS2-202ENST00000421263 BLMP54132 1417 aaPredicted RBP27.28■■□□□ 1.96
VARS2-202ENST00000421263 KRT27Q7Z3Y8 459 aa27.27■■□□□ 1.96
VARS2-202ENST00000421263 PRDM11Q9NQV5 511 aa27.26■■□□□ 1.95
VARS2-202ENST00000421263 SPATA31A5Q5VU36 1347 aa27.25■■□□□ 1.95
VARS2-202ENST00000421263 SPATA31A7Q8IWB4 1347 aa27.25■■□□□ 1.95
VARS2-202ENST00000421263 FAM98CQ17RN3 349 aaKnown RBP27.24■■□□□ 1.95
VARS2-202ENST00000421263 KIAA0232Q92628 1395 aa27.23■■□□□ 1.95
VARS2-202ENST00000421263 SRPK2P78362 688 aaKnown RBP27.23■■□□□ 1.95
VARS2-202ENST00000421263 CABP2Q9NPB3 220 aa27.23■■□□□ 1.95
VARS2-202ENST00000421263 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
VARS2-202ENST00000421263 ZRANB1Q9UGI0 708 aa27.22■■□□□ 1.95
VARS2-202ENST00000421263 PHRF1Q9P1Y6 1649 aaKnown RBP27.21■■□□□ 1.95
VARS2-202ENST00000421263 PPIP5K1Q6PFW1 1433 aa27.21■■□□□ 1.95
VARS2-202ENST00000421263 ZC3H6P61129 1189 aaKnown RBP27.2■■□□□ 1.94
VARS2-202ENST00000421263 ABTB2Q8N961 1025 aa27.2■■□□□ 1.94
VARS2-202ENST00000421263 CHRNA2Q15822 529 aa27.19■■□□□ 1.94
VARS2-202ENST00000421263 QRICH2Q9H0J4 1663 aa27.18■■□□□ 1.94
VARS2-202ENST00000421263 NEUROD1Q13562 356 aa27.18■■□□□ 1.94
VARS2-202ENST00000421263 TRPM1Q7Z4N2 1603 aa27.18■■□□□ 1.94
VARS2-202ENST00000421263 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
VARS2-202ENST00000421263 USP19O94966 1318 aa27.17■■□□□ 1.94
VARS2-202ENST00000421263 DEFB132Q7Z7B7 95 aa27.17■■□□□ 1.94
VARS2-202ENST00000421263 SPATA31A1Q5TZJ5 1347 aa27.16■■□□□ 1.94
VARS2-202ENST00000421263 A0A0G2JS52 829 aa27.16■■□□□ 1.94
VARS2-202ENST00000421263 MYT1Q01538 1121 aa27.16■■□□□ 1.94
VARS2-202ENST00000421263 CABP1Q9NZU7 370 aa27.16■■□□□ 1.94
VARS2-202ENST00000421263 SRCAPQ6ZRS2 3230 aa27.15■■□□□ 1.94
VARS2-202ENST00000421263 SF3B2Q13435 895 aaKnown RBP27.15■■□□□ 1.94
VARS2-202ENST00000421263 CPDO75976 1380 aa27.14■■□□□ 1.94
VARS2-202ENST00000421263 NLRP13Q86W25 1043 aa27.14■■□□□ 1.94
VARS2-202ENST00000421263 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.93
VARS2-202ENST00000421263 EVC2Q86UK5 1308 aa27.13■■□□□ 1.93
VARS2-202ENST00000421263 NRKQ7Z2Y5 1582 aa27.12■■□□□ 1.93
VARS2-202ENST00000421263 GCP02774 474 aa27.11■■□□□ 1.93
VARS2-202ENST00000421263 STRN4Q9NRL3 753 aa27.11■■□□□ 1.93
VARS2-202ENST00000421263 ROCK2O75116 1388 aaKnown RBP27.1■■□□□ 1.93
VARS2-202ENST00000421263 USP6P35125 1406 aa27.1■■□□□ 1.93
VARS2-202ENST00000421263 SSH2Q76I76 1423 aa27.09■■□□□ 1.93
VARS2-202ENST00000421263 CAMTA1Q9Y6Y1 1673 aa27.09■■□□□ 1.93
VARS2-202ENST00000421263 LMO7Q8WWI1 1683 aa27.08■■□□□ 1.92
VARS2-202ENST00000421263 EVA1CP58658 441 aa27.07■■□□□ 1.92
VARS2-202ENST00000421263 FAM182BQ5T319 152 aa27.07■■□□□ 1.92
VARS2-202ENST00000421263 BARGINQ6ZT62 677 aa27.07■■□□□ 1.92
VARS2-202ENST00000421263 BAG6P46379 1132 aa27.05■■□□□ 1.92
VARS2-202ENST00000421263 NLRP6P59044 892 aa27.04■■□□□ 1.92
VARS2-202ENST00000421263 LARP1Q6PKG0 1096 aaKnown RBP27.04■■□□□ 1.92
VARS2-202ENST00000421263 ZNF692Q9BU19 519 aaPredicted RBP27.04■■□□□ 1.92
VARS2-202ENST00000421263 USP35Q9P2H5 1018 aa27.01■■□□□ 1.91
VARS2-202ENST00000421263 SLIT3O75094 1523 aa27■■□□□ 1.91
VARS2-202ENST00000421263 TCP11L2Q8N4U5 519 aa27■■□□□ 1.91
VARS2-202ENST00000421263 THRAP3Q9Y2W1 955 aaKnown RBP27■■□□□ 1.91
VARS2-202ENST00000421263 RGPD1P0DJD0 1748 aa26.99■■□□□ 1.91
VARS2-202ENST00000421263 FAM196AQ6ZSG2 479 aa26.99■■□□□ 1.91
VARS2-202ENST00000421263 AATKQ6ZMQ8 1374 aa26.98■■□□□ 1.91
VARS2-202ENST00000421263 SBNO2Q9Y2G9 1366 aa26.98■■□□□ 1.91
VARS2-202ENST00000421263 TTC21BQ7Z4L5 1316 aa26.98■■□□□ 1.91
VARS2-202ENST00000421263 COL5A2P05997 1499 aaPredicted RBP26.98■■□□□ 1.91
VARS2-202ENST00000421263 DISP2A7MBM2 1401 aa26.98■■□□□ 1.91
VARS2-202ENST00000421263 CPSF1Q10570 1443 aaKnown RBP26.98■■□□□ 1.91
VARS2-202ENST00000421263 EN1Q05925 392 aaPredicted RBP26.97■■□□□ 1.91
VARS2-202ENST00000421263 PIK3C2AO00443 1686 aa26.97■■□□□ 1.91
VARS2-202ENST00000421263 AKAP12Q02952 1782 aa26.95■■□□□ 1.9
VARS2-202ENST00000421263 CARD11Q9BXL7 1154 aa26.94■■□□□ 1.9
VARS2-202ENST00000421263 TTC21AQ8NDW8 1320 aa26.93■■□□□ 1.9
VARS2-202ENST00000421263 PDE3BQ13370 1112 aa26.93■■□□□ 1.9
VARS2-202ENST00000421263 TNS1Q9HBL0 1735 aaKnown RBP26.93■■□□□ 1.9
VARS2-202ENST00000421263 CRB1P82279 1406 aa26.92■■□□□ 1.9
VARS2-202ENST00000421263 COL18A1P39060 1754 aa26.92■■□□□ 1.9
VARS2-202ENST00000421263 TRIM37O94972 964 aa26.92■■□□□ 1.9
VARS2-202ENST00000421263 ARHGEF25Q86VW2 580 aa26.91■■□□□ 1.9
VARS2-202ENST00000421263 AXIN2Q9Y2T1 843 aa26.91■■□□□ 1.9
VARS2-202ENST00000421263 KCNH5Q8NCM2 988 aa26.9■■□□□ 1.9
VARS2-202ENST00000421263 CAMKK2Q96RR4 588 aa26.9■■□□□ 1.9
VARS2-202ENST00000421263 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
VARS2-202ENST00000421263 TONSLQ96HA7 1378 aa26.89■■□□□ 1.9
VARS2-202ENST00000421263 ZBTB7CA1YPR0 619 aa26.88■■□□□ 1.89
VARS2-202ENST00000421263 EZH2Q15910 746 aaKnown RBP26.88■■□□□ 1.89
VARS2-202ENST00000421263 PARP4Q9UKK3 1724 aaKnown RBP26.87■■□□□ 1.89
VARS2-202ENST00000421263 PSDA5PKW4 1024 aaPredicted RBP26.85■■□□□ 1.89
VARS2-202ENST00000421263 APBA3O96018 575 aa26.85■■□□□ 1.89
VARS2-202ENST00000421263 WDR17Q8IZU2 1322 aa26.85■■□□□ 1.89
VARS2-202ENST00000421263 PUS7Q96PZ0 661 aaKnown RBP26.84■■□□□ 1.89
VARS2-202ENST00000421263 CD163L1Q9NR16 1453 aa26.84■■□□□ 1.89
VARS2-202ENST00000421263 USP31Q70CQ4 1352 aa26.84■■□□□ 1.89
VARS2-202ENST00000421263 MON2Q7Z3U7 1717 aa26.83■■□□□ 1.89
VARS2-202ENST00000421263 C11orf95C9JLR9 678 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms