RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 KIAA0754O94854 1291 aa14.73□□□□□ -0.05
CLCN4-203ENST00000421085 ZNF396Q96N95 335 aaPredicted RBP14.73□□□□□ -0.05
CLCN4-203ENST00000421085 NOB1Q9ULX3 412 aaKnown RBP14.73□□□□□ -0.05
CLCN4-203ENST00000421085 FAM177A1Q8N128 213 aaPredicted RBP14.73□□□□□ -0.05
CLCN4-203ENST00000421085 PPP2R1AP30153 589 aa14.73□□□□□ -0.05
CLCN4-203ENST00000421085 MIA2Q96PC5 1412 aa14.73□□□□□ -0.05
CLCN4-203ENST00000421085 BRMS1Q9HCU9 246 aa14.73□□□□□ -0.05
CLCN4-203ENST00000421085 MYO6Q9UM54 1294 aa14.72□□□□□ -0.05
CLCN4-203ENST00000421085 SURF6O75683 361 aaKnown RBP14.72□□□□□ -0.05
CLCN4-203ENST00000421085 TOP2AP11388 1531 aaKnown RBP14.72□□□□□ -0.05
CLCN4-203ENST00000421085 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
CLCN4-203ENST00000421085 STK38Q15208 465 aa14.72□□□□□ -0.05
CLCN4-203ENST00000421085 MTHFSP49914 203 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 CBX1P83916 185 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 CIZ1Q9ULV3 898 aaPredicted RBP14.71□□□□□ -0.05
CLCN4-203ENST00000421085 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 CLASRPQ8N2M8 674 aaKnown RBP14.71□□□□□ -0.05
CLCN4-203ENST00000421085 ODF2Q5BJF6 829 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 TAF3Q5VWG9 929 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 XBP1P17861 261 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 ATP2B1P20020 1258 aa14.71□□□□□ -0.05
CLCN4-203ENST00000421085 EIF3JO75822 258 aaKnown RBP14.71□□□□□ -0.06
CLCN4-203ENST00000421085 ERLIN1O75477 346 aa14.7□□□□□ -0.06
CLCN4-203ENST00000421085 AEBP1Q8IUX7 1158 aa14.7□□□□□ -0.06
CLCN4-203ENST00000421085 DHX8Q14562 1220 aaKnown RBP14.7□□□□□ -0.06
CLCN4-203ENST00000421085 RIC3Q7Z5B4 369 aa14.7□□□□□ -0.06
CLCN4-203ENST00000421085 GNAI3P08754 354 aa14.69□□□□□ -0.06
CLCN4-203ENST00000421085 AIMP1Q12904 312 aaKnown RBP14.69□□□□□ -0.06
CLCN4-203ENST00000421085 MAGEC2Q9UBF1 373 aaPredicted RBP14.69□□□□□ -0.06
CLCN4-203ENST00000421085 KRT85P78386 507 aa14.69□□□□□ -0.06
CLCN4-203ENST00000421085 STK3Q13188 491 aa14.69□□□□□ -0.06
CLCN4-203ENST00000421085 SYCE3A1L190 88 aa14.69□□□□□ -0.06
CLCN4-203ENST00000421085 GOLGA6L10A6NI86 522 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 ZFYVE27Q5T4F4 411 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 CYP46A1Q9Y6A2 500 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
CLCN4-203ENST00000421085 TRIM34Q9BYJ4 488 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 FGD6Q6ZV73 1430 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 PPFIBP1Q86W92 1011 aa14.68□□□□□ -0.06
CLCN4-203ENST00000421085 PNISRQ8TF01 805 aaKnown RBP14.68□□□□□ -0.06
CLCN4-203ENST00000421085 ME1P48163 572 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
CLCN4-203ENST00000421085 DEF6Q9H4E7 631 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 HIP1O00291 1037 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 CHD1LQ86WJ1 897 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 FAM193AP78312 1265 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 CCDC184Q52MB2 194 aa14.67□□□□□ -0.06
CLCN4-203ENST00000421085 DHX37Q8IY37 1157 aaKnown RBP14.67□□□□□ -0.06
CLCN4-203ENST00000421085 CCDC43Q96MW1 224 aaKnown RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 FYB1O15117 783 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 FILIP1Q7Z7B0 1213 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 TWISTNBQ3B726 338 aaPredicted RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 ZNHIT6Q9NWK9 470 aaKnown RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 TRHP20396 242 aaPredicted RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 USP8P40818 1118 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 MVPQ14764 893 aaKnown RBP14.66□□□□□ -0.06
CLCN4-203ENST00000421085 CCDC102AQ96A19 550 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 NUP62CLQ9H1M0 184 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 PDCL3Q9H2J4 239 aa14.66□□□□□ -0.06
CLCN4-203ENST00000421085 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
CLCN4-203ENST00000421085 GNAI2P04899 355 aa14.65□□□□□ -0.06
CLCN4-203ENST00000421085 XPCQ01831 940 aaPredicted RBP14.65□□□□□ -0.06
CLCN4-203ENST00000421085 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
CLCN4-203ENST00000421085 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
CLCN4-203ENST00000421085 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
CLCN4-203ENST00000421085 MYOM3Q5VTT5 1437 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 CBFA2T2O43439 604 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 CCDC30Q5VVM6 783 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 ERLIN2O94905 339 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 MAP4K4O95819 1239 aaPredicted RBP14.64□□□□□ -0.07
CLCN4-203ENST00000421085 JMYQ8N9B5 988 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 UBXN4Q92575 508 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 CENPHQ9H3R5 247 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 CTDP1Q9Y5B0 961 aaPredicted RBP14.64□□□□□ -0.07
CLCN4-203ENST00000421085 ANKRD1Q15327 319 aa14.64□□□□□ -0.07
CLCN4-203ENST00000421085 SART3Q15020 963 aaKnown RBP14.63□□□□□ -0.07
CLCN4-203ENST00000421085 DACH1Q9UI36 760 aa14.63□□□□□ -0.07
CLCN4-203ENST00000421085 GOLGA6L7A0A1B0GV03 622 aa14.63□□□□□ -0.07
CLCN4-203ENST00000421085 LRRCC1Q9C099 1032 aa14.63□□□□□ -0.07
CLCN4-203ENST00000421085 PDS5BQ9NTI5 1447 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 TXLNAP40222 546 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 TMCO3Q6UWJ1 677 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 JPH4Q96JJ6 628 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 CEP57L1Q8IYX8 460 aa14.62□□□□□ -0.07
CLCN4-203ENST00000421085 ZNF644Q9H582 1327 aaPredicted RBP14.62□□□□□ -0.07
CLCN4-203ENST00000421085 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
CLCN4-203ENST00000421085 EVA1CP58658 441 aa14.61□□□□□ -0.07
CLCN4-203ENST00000421085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.61□□□□□ -0.076e-9■■■■■ 134.6
CLCN4-203ENST00000421085 SKAP1Q86WV1 359 aa14.61□□□□□ -0.07
CLCN4-203ENST00000421085 UBE2Q2Q8WVN8 375 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 CAMK4Q16566 473 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 STK11IPQ8N1F8 1099 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 NEFHP12036 1026 aa14.6□□□□□ -0.07
CLCN4-203ENST00000421085 PTPN14Q15678 1187 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms