RNA–Protein interactions for RNA: ENST00000421058.1

PUDPP1-201, Transcript of pseudouridine 5'-phosphatase pseudogene 1, humanhuman

BASIC

Gene PUDPP1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDPP1-201ENST00000421058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.43□□□□□ -0.58
PUDPP1-201ENST00000421058 PANK3Q9H999 370 aa11.43□□□□□ -0.58
PUDPP1-201ENST00000421058 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
PUDPP1-201ENST00000421058 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 NUTM2BA6NNL0 878 aaPredicted RBP11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 NUTM2EB1AL46 878 aaPredicted RBP11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 NUTM2AQ8IVF1 878 aaPredicted RBP11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 KCNH5Q8NCM2 988 aa11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 COG3Q96JB2 828 aa11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 USP6P35125 1406 aa11.42□□□□□ -0.58
PUDPP1-201ENST00000421058 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 CGNL1Q0VF96 1302 aa11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 TOPAZ1Q8N9V7 1692 aa11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 C11orf95C9JLR9 678 aaPredicted RBP11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 CPSF1Q10570 1443 aaKnown RBP11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
PUDPP1-201ENST00000421058 PXDNQ92626 1479 aa11.4□□□□□ -0.58
PUDPP1-201ENST00000421058 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
PUDPP1-201ENST00000421058 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
PUDPP1-201ENST00000421058 PHF23Q9BUL5 403 aaPredicted RBP11.39□□□□□ -0.59
PUDPP1-201ENST00000421058 COL16A1Q07092 1604 aaPredicted RBP11.38□□□□□ -0.59
PUDPP1-201ENST00000421058 PNPLA6Q8IY17 1366 aa11.38□□□□□ -0.59
PUDPP1-201ENST00000421058 ADAMTS2O95450 1211 aa11.37□□□□□ -0.59
PUDPP1-201ENST00000421058 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
PUDPP1-201ENST00000421058 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
PUDPP1-201ENST00000421058 NSD3Q9BZ95 1437 aa11.36□□□□□ -0.59
PUDPP1-201ENST00000421058 GCP02774 474 aa11.36□□□□□ -0.59
PUDPP1-201ENST00000421058 NME9Q86XW9 330 aa11.36□□□□□ -0.59
PUDPP1-201ENST00000421058 ZBTB7CA1YPR0 619 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 FYB1O15117 783 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 CABLES1Q8TDN4 633 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 C8orf37Q96NL8 207 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 PRDM11Q9NQV5 511 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 NSD2O96028 1365 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 SHPRHQ149N8 1683 aa11.35□□□□□ -0.59
PUDPP1-201ENST00000421058 CD163L1Q9NR16 1453 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 USP31Q70CQ4 1352 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 SOX12O15370 315 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 EVA1CP58658 441 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 ZC3H6P61129 1189 aaKnown RBP11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 CARD14Q9BXL6 1004 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 SSH2Q76I76 1423 aa11.34□□□□□ -0.59
PUDPP1-201ENST00000421058 MON2Q7Z3U7 1717 aa11.33□□□□□ -0.6
PUDPP1-201ENST00000421058 ZNF772Q68DY9 489 aaPredicted RBP11.33□□□□□ -0.6
PUDPP1-201ENST00000421058 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
PUDPP1-201ENST00000421058 AMPHP49418 695 aa11.32□□□□□ -0.6
PUDPP1-201ENST00000421058 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
PUDPP1-201ENST00000421058 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
PUDPP1-201ENST00000421058 CC2D1BQ5T0F9 858 aaKnown RBP11.31□□□□□ -0.6
PUDPP1-201ENST00000421058 USP19O94966 1318 aa11.31□□□□□ -0.6
PUDPP1-201ENST00000421058 PER1O15534 1290 aaPredicted RBP11.3□□□□□ -0.6
PUDPP1-201ENST00000421058 CNGB1Q14028 1251 aaPredicted RBP11.3□□□□□ -0.6
PUDPP1-201ENST00000421058 USP21Q9UK80 565 aa11.3□□□□□ -0.6
PUDPP1-201ENST00000421058 CCDC9Q9Y3X0 531 aaKnown RBP11.3□□□□□ -0.6
PUDPP1-201ENST00000421058 MYOM1P52179 1685 aa11.3□□□□□ -0.6
PUDPP1-201ENST00000421058 MED1Q15648 1581 aaPredicted RBP11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 PPM1GO15355 546 aaPredicted RBP11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 CSB-PGBD3P0DP91 1061 aa11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 BTG4Q9NY30 223 aa11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
PUDPP1-201ENST00000421058 CPDO75976 1380 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 KIAA0232Q92628 1395 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 FAM83GA6ND36 823 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 AMER1Q5JTC6 1135 aaPredicted RBP11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 ARHGEF25Q86VW2 580 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 AFF2P51816 1311 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 NRKQ7Z2Y5 1582 aa11.28□□□□□ -0.6
PUDPP1-201ENST00000421058 RALBP1Q15311 655 aa11.27□□□□□ -0.61
PUDPP1-201ENST00000421058 CHRNA2Q15822 529 aa11.27□□□□□ -0.61
PUDPP1-201ENST00000421058 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
PUDPP1-201ENST00000421058 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
PUDPP1-201ENST00000421058 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
PUDPP1-201ENST00000421058 KIF20BQ96Q89 1820 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 ANP32CO43423 234 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 IP6K1Q92551 441 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 QTRT2Q9H974 415 aaKnown RBP11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 AATKQ6ZMQ8 1374 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
PUDPP1-201ENST00000421058 SLIT3O75094 1523 aa11.25□□□□□ -0.61
PUDPP1-201ENST00000421058 TOM1L2Q6ZVM7 507 aa11.25□□□□□ -0.61
PUDPP1-201ENST00000421058 SMG6Q86US8 1419 aaKnown RBP11.25□□□□□ -0.61
PUDPP1-201ENST00000421058 RXRBP28702 533 aa11.24□□□□□ -0.61
PUDPP1-201ENST00000421058 RRS1Q15050 365 aaKnown RBP11.24□□□□□ -0.61
PUDPP1-201ENST00000421058 COL14A1Q05707 1796 aaKnown RBP11.23□□□□□ -0.61
PUDPP1-201ENST00000421058 MAP3K19Q56UN5 1328 aa11.23□□□□□ -0.61
PUDPP1-201ENST00000421058 RTL1A6NKG5 1358 aa11.23□□□□□ -0.61
PUDPP1-201ENST00000421058 FLT4P35916 1363 aa11.23□□□□□ -0.61
PUDPP1-201ENST00000421058 LRP6O75581 1613 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms