RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ZBED9Q6R2W3 1325 aa9.67□□□□□ -0.86
BDNF-209ENST00000420794 XPCQ01831 940 aaPredicted RBP9.67□□□□□ -0.86
BDNF-209ENST00000420794 KRT28Q7Z3Y7 464 aa9.67□□□□□ -0.86
BDNF-209ENST00000420794 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
BDNF-209ENST00000420794 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
BDNF-209ENST00000420794 LMOD3Q0VAK6 560 aa9.66□□□□□ -0.86
BDNF-209ENST00000420794 NPHP3Q7Z494 1330 aa9.66□□□□□ -0.86
BDNF-209ENST00000420794 EDC4Q6P2E9 1401 aaKnown RBP9.66□□□□□ -0.86
BDNF-209ENST00000420794 APAF1O14727 1248 aa9.66□□□□□ -0.86
BDNF-209ENST00000420794 GOLGA2Q08379 1002 aa9.66□□□□□ -0.86
BDNF-209ENST00000420794 TMEM94Q12767 1356 aa9.65□□□□□ -0.86
BDNF-209ENST00000420794 PTCH1Q13635 1447 aa9.65□□□□□ -0.86
BDNF-209ENST00000420794 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
BDNF-209ENST00000420794 RRS1Q15050 365 aaKnown RBP9.65□□□□□ -0.87
BDNF-209ENST00000420794 TECPR2O15040 1411 aa9.65□□□□□ -0.87
BDNF-209ENST00000420794 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 DIP2AQ14689 1571 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 UBR1Q8IWV7 1749 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 MYH16Q9H6N6 1097 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 FKBP8Q14318 412 aa9.64□□□□□ -0.87
BDNF-209ENST00000420794 ATP7BP35670 1465 aa9.63□□□□□ -0.87
BDNF-209ENST00000420794 QRICH2Q9H0J4 1663 aa9.63□□□□□ -0.87
BDNF-209ENST00000420794 ADAMTSL3P82987 1691 aa9.63□□□□□ -0.87
BDNF-209ENST00000420794 ORAI2Q96SN7 254 aa9.63□□□□□ -0.87
BDNF-209ENST00000420794 TOM1O60784 492 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 HMOX1P09601 288 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 EVA1CP58658 441 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 RRP7AQ9Y3A4 280 aaKnown RBP9.62□□□□□ -0.87
BDNF-209ENST00000420794 SUPT16HQ9Y5B9 1047 aaKnown RBP9.62□□□□□ -0.87
BDNF-209ENST00000420794 MYO5BQ9ULV0 1848 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 EMILIN1Q9Y6C2 1016 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 PRR36Q9H6K5 1346 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
BDNF-209ENST00000420794 SMG6Q86US8 1419 aaKnown RBP9.62□□□□□ -0.87
BDNF-209ENST00000420794 FCHSD2O94868 740 aa9.61□□□□□ -0.87
BDNF-209ENST00000420794 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
BDNF-209ENST00000420794 TCP11L2Q8N4U5 519 aa9.61□□□□□ -0.87
BDNF-209ENST00000420794 SLAIN2Q9P270 581 aa9.61□□□□□ -0.87
BDNF-209ENST00000420794 IFT172Q9UG01 1749 aa9.61□□□□□ -0.87
BDNF-209ENST00000420794 ZNF335Q9H4Z2 1342 aaPredicted RBP9.61□□□□□ -0.87
BDNF-209ENST00000420794 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
BDNF-209ENST00000420794 RIPK4P57078 832 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 PIP4K2BP78356 416 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 PTPRUQ92729 1446 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 E9PSI1 815 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 LMTK3Q96Q04 1460 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 POLKQ9UBT6 870 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 ZRANB1Q9UGI0 708 aa9.6□□□□□ -0.87
BDNF-209ENST00000420794 ZC3H6P61129 1189 aaKnown RBP9.59□□□□□ -0.87
BDNF-209ENST00000420794 SULT6B1Q6IMI4 303 aa9.59□□□□□ -0.87
BDNF-209ENST00000420794 PRDM11Q9NQV5 511 aa9.59□□□□□ -0.87
BDNF-209ENST00000420794 NLRP2Q9NX02 1062 aa9.59□□□□□ -0.87
BDNF-209ENST00000420794 RAPGEF4Q8WZA2 1011 aa9.59□□□□□ -0.87
BDNF-209ENST00000420794 RCAN3Q9UKA8 241 aa9.58□□□□□ -0.88
BDNF-209ENST00000420794 C1orf141Q5JVX7 400 aa9.58□□□□□ -0.88
BDNF-209ENST00000420794 USP6P35125 1406 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 A0A0G2JS52 829 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 CCDC9Q9Y3X0 531 aaKnown RBP9.57□□□□□ -0.88
BDNF-209ENST00000420794 FBLN1P23142 703 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 UBAP1LF5GYI3 381 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 CHMP4AQ9BY43 222 aa9.57□□□□□ -0.88
BDNF-209ENST00000420794 CPS1P31327 1500 aa9.56□□□□□ -0.88
BDNF-209ENST00000420794 GCP02774 474 aa9.56□□□□□ -0.88
BDNF-209ENST00000420794 MS4A1P11836 297 aa9.56□□□□□ -0.88
BDNF-209ENST00000420794 ARHGEF28Q8N1W1 1705 aaKnown RBP9.56□□□□□ -0.88
BDNF-209ENST00000420794 MED14O60244 1454 aa9.56□□□□□ -0.88
BDNF-209ENST00000420794 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
BDNF-209ENST00000420794 FLT4P35916 1363 aa9.55□□□□□ -0.88
BDNF-209ENST00000420794 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
BDNF-209ENST00000420794 LRRC59Q96AG4 307 aaKnown RBP9.55□□□□□ -0.88
BDNF-209ENST00000420794 POLR1AO95602 1720 aaPredicted RBP9.55□□□□□ -0.88
BDNF-209ENST00000420794 NCOA3Q9Y6Q9 1424 aa9.55□□□□□ -0.88
BDNF-209ENST00000420794 PLEKHO1Q53GL0 409 aaPredicted RBP9.55□□□□□ -0.88
BDNF-209ENST00000420794 HSP90AB2PQ58FF8 381 aa9.55□□□□□ -0.88
BDNF-209ENST00000420794 FRAT1Q92837 279 aaPredicted RBP9.54□□□□□ -0.88
BDNF-209ENST00000420794 MAP3K19Q56UN5 1328 aa9.54□□□□□ -0.88
BDNF-209ENST00000420794 GNAI1P63096 354 aa9.54□□□□□ -0.88
BDNF-209ENST00000420794 TEFQ10587 303 aa9.54□□□□□ -0.88
BDNF-209ENST00000420794 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
BDNF-209ENST00000420794 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
BDNF-209ENST00000420794 WDR63Q8IWG1 891 aa9.54□□□□□ -0.88
BDNF-209ENST00000420794 FTSJ3Q8IY81 847 aaKnown RBP9.54□□□□□ -0.88
BDNF-209ENST00000420794 AATKQ6ZMQ8 1374 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
BDNF-209ENST00000420794 TOM1L2Q6ZVM7 507 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
BDNF-209ENST00000420794 TATP17735 454 aaPredicted RBP9.53□□□□□ -0.88
BDNF-209ENST00000420794 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 CPSF1Q10570 1443 aaKnown RBP9.53□□□□□ -0.88
BDNF-209ENST00000420794 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
BDNF-209ENST00000420794 MEX3CQ5U5Q3 659 aaKnown RBP9.53□□□□□ -0.88
BDNF-209ENST00000420794 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
BDNF-209ENST00000420794 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms