RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 COL14A1Q05707 1796 aaKnown RBP18.71■□□□□ 0.59
PRAME-207ENST00000420709 A0A0G2JS52 829 aa18.71■□□□□ 0.59
PRAME-207ENST00000420709 MYT1Q01538 1121 aa18.71■□□□□ 0.59
PRAME-207ENST00000420709 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
PRAME-207ENST00000420709 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
PRAME-207ENST00000420709 BLMP54132 1417 aaPredicted RBP18.71■□□□□ 0.59
PRAME-207ENST00000420709 FAM98CQ17RN3 349 aaKnown RBP18.69■□□□□ 0.58
PRAME-207ENST00000420709 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
PRAME-207ENST00000420709 CDK19Q9BWU1 502 aa18.69■□□□□ 0.58
PRAME-207ENST00000420709 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
PRAME-207ENST00000420709 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
PRAME-207ENST00000420709 KRT27Q7Z3Y8 459 aa18.68■□□□□ 0.58
PRAME-207ENST00000420709 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
PRAME-207ENST00000420709 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
PRAME-207ENST00000420709 NUTM2GQ5VZR2 741 aa18.66■□□□□ 0.58
PRAME-207ENST00000420709 PHRF1Q9P1Y6 1649 aaKnown RBP18.66■□□□□ 0.58
PRAME-207ENST00000420709 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
PRAME-207ENST00000420709 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
PRAME-207ENST00000420709 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
PRAME-207ENST00000420709 ACEP12821 1306 aa18.63■□□□□ 0.57
PRAME-207ENST00000420709 KIAA0232Q92628 1395 aa18.63■□□□□ 0.57
PRAME-207ENST00000420709 FAM182BQ5T319 152 aa18.62■□□□□ 0.57
PRAME-207ENST00000420709 SPATA31A5Q5VU36 1347 aa18.62■□□□□ 0.57
PRAME-207ENST00000420709 SPATA31A7Q8IWB4 1347 aa18.62■□□□□ 0.57
PRAME-207ENST00000420709 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
PRAME-207ENST00000420709 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
PRAME-207ENST00000420709 NBPF8Q3BBV2 869 aa18.61■□□□□ 0.57
PRAME-207ENST00000420709 STRN4Q9NRL3 753 aa18.6■□□□□ 0.57
PRAME-207ENST00000420709 CCDC61Q9Y6R9 512 aa18.6■□□□□ 0.57
PRAME-207ENST00000420709 THSD7AQ9UPZ6 1657 aa18.59■□□□□ 0.57
PRAME-207ENST00000420709 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
PRAME-207ENST00000420709 QRICH2Q9H0J4 1663 aa18.58■□□□□ 0.57
PRAME-207ENST00000420709 PLEKHG3A1L390 1219 aa18.58■□□□□ 0.56
PRAME-207ENST00000420709 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
PRAME-207ENST00000420709 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
PRAME-207ENST00000420709 NRKQ7Z2Y5 1582 aa18.58■□□□□ 0.56
PRAME-207ENST00000420709 PPIP5K1Q6PFW1 1433 aa18.57■□□□□ 0.56
PRAME-207ENST00000420709 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
PRAME-207ENST00000420709 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
PRAME-207ENST00000420709 BAG6P46379 1132 aa18.55■□□□□ 0.56
PRAME-207ENST00000420709 L3MBTL2Q969R5 705 aa18.55■□□□□ 0.56
PRAME-207ENST00000420709 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
PRAME-207ENST00000420709 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
PRAME-207ENST00000420709 RGPD1P0DJD0 1748 aa18.54■□□□□ 0.56
PRAME-207ENST00000420709 EN1Q05925 392 aaPredicted RBP18.53■□□□□ 0.56
PRAME-207ENST00000420709 USP19O94966 1318 aa18.52■□□□□ 0.56
PRAME-207ENST00000420709 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
PRAME-207ENST00000420709 PSDA5PKW4 1024 aaPredicted RBP18.52■□□□□ 0.56
PRAME-207ENST00000420709 EVA1CP58658 441 aa18.52■□□□□ 0.56
PRAME-207ENST00000420709 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
PRAME-207ENST00000420709 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.55
PRAME-207ENST00000420709 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
PRAME-207ENST00000420709 TRPM1Q7Z4N2 1603 aa18.51■□□□□ 0.55
PRAME-207ENST00000420709 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
PRAME-207ENST00000420709 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
PRAME-207ENST00000420709 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
PRAME-207ENST00000420709 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
PRAME-207ENST00000420709 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
PRAME-207ENST00000420709 CPDO75976 1380 aa18.48■□□□□ 0.55
PRAME-207ENST00000420709 GCP02774 474 aa18.48■□□□□ 0.55
PRAME-207ENST00000420709 USP6P35125 1406 aa18.48■□□□□ 0.55
PRAME-207ENST00000420709 TRIM37O94972 964 aa18.47■□□□□ 0.55
PRAME-207ENST00000420709 EZH2Q15910 746 aaKnown RBP18.46■□□□□ 0.55
PRAME-207ENST00000420709 ROCK2O75116 1388 aaKnown RBP18.45■□□□□ 0.54
PRAME-207ENST00000420709 NLRP6P59044 892 aa18.45■□□□□ 0.54
PRAME-207ENST00000420709 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
PRAME-207ENST00000420709 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
PRAME-207ENST00000420709 COL5A2P05997 1499 aaPredicted RBP18.45■□□□□ 0.54
PRAME-207ENST00000420709 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
PRAME-207ENST00000420709 DISP2A7MBM2 1401 aa18.44■□□□□ 0.54
PRAME-207ENST00000420709 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
PRAME-207ENST00000420709 TCP11L2Q8N4U5 519 aa18.44■□□□□ 0.54
PRAME-207ENST00000420709 LRP5O75197 1615 aa18.44■□□□□ 0.54
PRAME-207ENST00000420709 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
PRAME-207ENST00000420709 SLIT3O75094 1523 aa18.43■□□□□ 0.54
PRAME-207ENST00000420709 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
PRAME-207ENST00000420709 R3HDM1Q15032 1099 aaKnown RBP18.42■□□□□ 0.54
PRAME-207ENST00000420709 APBA3O96018 575 aa18.41■□□□□ 0.54
PRAME-207ENST00000420709 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
PRAME-207ENST00000420709 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
PRAME-207ENST00000420709 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
PRAME-207ENST00000420709 CRB1P82279 1406 aa18.39■□□□□ 0.53
PRAME-207ENST00000420709 SOX12O15370 315 aa18.38■□□□□ 0.53
PRAME-207ENST00000420709 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
PRAME-207ENST00000420709 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
PRAME-207ENST00000420709 COL18A1P39060 1754 aa18.37■□□□□ 0.53
PRAME-207ENST00000420709 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
PRAME-207ENST00000420709 RREB1Q92766 1687 aa18.36■□□□□ 0.53
PRAME-207ENST00000420709 AXIN2Q9Y2T1 843 aa18.36■□□□□ 0.53
PRAME-207ENST00000420709 LRRC37A3O60309 1634 aa18.35■□□□□ 0.53
PRAME-207ENST00000420709 CPSF1Q10570 1443 aaKnown RBP18.35■□□□□ 0.53
PRAME-207ENST00000420709 TOM1L2Q6ZVM7 507 aa18.35■□□□□ 0.53
PRAME-207ENST00000420709 RGPD5Q99666 1765 aa18.35■□□□□ 0.53
PRAME-207ENST00000420709 NUP188Q5SRE5 1749 aa18.35■□□□□ 0.53
PRAME-207ENST00000420709 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
PRAME-207ENST00000420709 KTN1Q86UP2 1357 aaKnown RBP18.33■□□□□ 0.53
PRAME-207ENST00000420709 WNK3Q9BYP7 1800 aa18.33■□□□□ 0.53
PRAME-207ENST00000420709 PEAK1Q9H792 1746 aa18.32■□□□□ 0.52
PRAME-207ENST00000420709 PARD3Q8TEW0 1356 aa18.32■□□□□ 0.52
PRAME-207ENST00000420709 ARHGEF25Q86VW2 580 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms