RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 TRPC5Q9UL62 973 aaPredicted RBP5.65□□□□□ -1.5
PTPN22-202ENST00000420377 MYOM3Q5VTT5 1437 aa5.65□□□□□ -1.51
PTPN22-202ENST00000420377 KCNV2Q8TDN2 545 aa5.65□□□□□ -1.51
PTPN22-202ENST00000420377 CFDP1Q9UEE9 299 aaPredicted RBP5.65□□□□□ -1.51
PTPN22-202ENST00000420377 KIF1AQ12756 1690 aa5.65□□□□□ -1.51
PTPN22-202ENST00000420377 ONECUT3O60422 494 aaPredicted RBP5.64□□□□□ -1.51
PTPN22-202ENST00000420377 TICAM2Q86XR7 235 aa5.64□□□□□ -1.51
PTPN22-202ENST00000420377 FANCIQ9NVI1 1328 aa5.64□□□□□ -1.51
PTPN22-202ENST00000420377 HMGB2P26583 209 aaKnown RBP5.64□□□□□ -1.51
PTPN22-202ENST00000420377 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
PTPN22-202ENST00000420377 LRPPRCP42704 1394 aaKnown RBP5.64□□□□□ -1.51
PTPN22-202ENST00000420377 NCLP19338 710 aaKnown RBP5.63□□□□□ -1.51
PTPN22-202ENST00000420377 SUPT16HQ9Y5B9 1047 aaKnown RBP5.63□□□□□ -1.51
PTPN22-202ENST00000420377 TMEM131LA2VDJ0 1609 aa5.63□□□□□ -1.51
PTPN22-202ENST00000420377 BCL9LQ86UU0 1499 aa5.63□□□□□ -1.51
PTPN22-202ENST00000420377 SPDYE1Q8NFV5 336 aaPredicted RBP5.63□□□□□ -1.51
PTPN22-202ENST00000420377 PNPLA6Q8IY17 1366 aa5.63□□□□□ -1.51
PTPN22-202ENST00000420377 TXNDC2Q86VQ3 553 aa5.62□□□□□ -1.51
PTPN22-202ENST00000420377 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.62□□□□□ -1.51
PTPN22-202ENST00000420377 CLSTN1O94985 981 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 PROSER2Q86WR7 435 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-202ENST00000420377 SIRT1Q96EB6 747 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 MYOM2P54296 1465 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 FTSJ3Q8IY81 847 aaKnown RBP5.61□□□□□ -1.51
PTPN22-202ENST00000420377 TSPYL2Q9H2G4 693 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-202ENST00000420377 MST1RQ04912 1400 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 ADGRL3Q9HAR2 1447 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 RRBP1Q9P2E9 1410 aaKnown RBP5.61□□□□□ -1.51
PTPN22-202ENST00000420377 MAP3K5Q99683 1374 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 IRX6P78412 446 aaPredicted RBP5.61□□□□□ -1.51
PTPN22-202ENST00000420377 IL27Q8NEV9 243 aa5.61□□□□□ -1.51
PTPN22-202ENST00000420377 RREB1Q92766 1687 aa5.6□□□□□ -1.51
PTPN22-202ENST00000420377 CDC42BPGQ6DT37 1551 aa5.6□□□□□ -1.51
PTPN22-202ENST00000420377 SOS2Q07890 1332 aaPredicted RBP5.6□□□□□ -1.51
PTPN22-202ENST00000420377 CHADLQ6NUI6 762 aa5.6□□□□□ -1.51
PTPN22-202ENST00000420377 RBM19Q9Y4C8 960 aaKnown RBP5.6□□□□□ -1.51
PTPN22-202ENST00000420377 MEX3CQ5U5Q3 659 aaKnown RBP5.6□□□□□ -1.51
PTPN22-202ENST00000420377 LMOD2Q6P5Q4 547 aa5.6□□□□□ -1.51
PTPN22-202ENST00000420377 HFM1A2PYH4 1435 aa5.59□□□□□ -1.51
PTPN22-202ENST00000420377 YTHDC1Q96MU7 727 aaKnown RBP5.59□□□□□ -1.51
PTPN22-202ENST00000420377 SLIT2O94813 1529 aa5.59□□□□□ -1.51
PTPN22-202ENST00000420377 RRP9O43818 475 aaKnown RBP5.59□□□□□ -1.52
PTPN22-202ENST00000420377 REM2Q8IYK8 340 aaPredicted RBP5.59□□□□□ -1.52
PTPN22-202ENST00000420377 SECISBP2LQ93073 1101 aaKnown RBP5.59□□□□□ -1.52
PTPN22-202ENST00000420377 CHMP4BQ9H444 224 aaKnown RBP5.59□□□□□ -1.52
PTPN22-202ENST00000420377 PCDHB8Q9UN66 801 aa5.59□□□□□ -1.52
PTPN22-202ENST00000420377 PCDHB13Q9Y5F0 798 aa5.59□□□□□ -1.52
PTPN22-202ENST00000420377 COL24A1Q17RW2 1714 aa5.59□□□□□ -1.52
PTPN22-202ENST00000420377 KNDC1Q76NI1 1749 aa5.59□□□□□ -1.52
PTPN22-202ENST00000420377 ADAMTS13Q76LX8 1427 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 AFF2P51816 1311 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 KIF3BO15066 747 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 GTF2E1P29083 439 aaPredicted RBP5.58□□□□□ -1.52
PTPN22-202ENST00000420377 DIEXFQ68CQ4 756 aaKnown RBP5.58□□□□□ -1.52
PTPN22-202ENST00000420377 GGT6Q6P531 493 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 RIMS2Q9UQ26 1411 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 CNPY4Q8N129 248 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 BCL9O00512 1426 aa5.58□□□□□ -1.52
PTPN22-202ENST00000420377 ATF3P18847 181 aa5.57□□□□□ -1.52
PTPN22-202ENST00000420377 P3H3Q8IVL6 736 aa5.57□□□□□ -1.52
PTPN22-202ENST00000420377 RPGRIP1LQ68CZ1 1315 aa5.57□□□□□ -1.52
PTPN22-202ENST00000420377 ABCC5O15440 1437 aa5.57□□□□□ -1.52
PTPN22-202ENST00000420377 LTKP29376 864 aa5.57□□□□□ -1.52
PTPN22-202ENST00000420377 HNRNPMP52272 730 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPN22-202ENST00000420377 RBM33Q96EV2 1170 aaKnown RBP5.57□□□□□ -1.52
PTPN22-202ENST00000420377 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
PTPN22-202ENST00000420377 GRIPAP1Q4V328 841 aa5.56□□□□□ -1.52
PTPN22-202ENST00000420377 WDR70Q9NW82 654 aa5.56□□□□□ -1.52
PTPN22-202ENST00000420377 BRPF3Q9ULD4 1205 aa5.56□□□□□ -1.52
PTPN22-202ENST00000420377 BRD4O60885 1362 aaPredicted RBP5.56□□□□□ -1.52
PTPN22-202ENST00000420377 PITPNM1O00562 1244 aa5.56□□□□□ -1.52
PTPN22-202ENST00000420377 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
PTPN22-202ENST00000420377 SBNO1A3KN83 1393 aa5.56□□□□□ -1.52
PTPN22-202ENST00000420377 NALCNQ8IZF0 1738 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 CNGB1Q14028 1251 aaPredicted RBP5.55□□□□□ -1.52
PTPN22-202ENST00000420377 AATKQ6ZMQ8 1374 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 TECPR2O15040 1411 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 QSER1Q2KHR3 1735 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 AKT1S1Q96B36 256 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 THSD7AQ9UPZ6 1657 aa5.55□□□□□ -1.52
PTPN22-202ENST00000420377 ROCK1Q13464 1354 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 FBXO31Q5XUX0 539 aaPredicted RBP5.54□□□□□ -1.52
PTPN22-202ENST00000420377 ZNF592Q92610 1267 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 STAC3Q96MF2 364 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 MFRPQ9BY79 579 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 COL14A1Q05707 1796 aaKnown RBP5.54□□□□□ -1.52
PTPN22-202ENST00000420377 ANKRD30AQ9BXX3 1397 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 PPP1R37O75864 691 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 CALD1Q05682 793 aaKnown RBP5.54□□□□□ -1.52
PTPN22-202ENST00000420377 SF3B2Q13435 895 aaKnown RBP5.54□□□□□ -1.52
PTPN22-202ENST00000420377 VPS72Q15906 364 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 C1orf167Q5SNV9 1468 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 NRXN3Q9Y4C0 1643 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 SEMA3EO15041 775 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 BAG6P46379 1132 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 BRPF1P55201 1214 aaPredicted RBP5.54□□□□□ -1.52
PTPN22-202ENST00000420377 BRINP3Q76B58 766 aa5.54□□□□□ -1.52
PTPN22-202ENST00000420377 TNS1Q9HBL0 1735 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms