RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 CDC42BPBQ9Y5S2 1711 aa9.47□□□□□ -0.89
TVP23C-202ENST00000419890 HNRNPMP52272 730 aaKnown RBP eCLIP9.46□□□□□ -0.92e-6■■■■□ 22
TVP23C-202ENST00000419890 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 NOP58Q9Y2X3 529 aaKnown RBP9.46□□□□□ -0.9
TVP23C-202ENST00000419890 DAPK1P53355 1430 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 ADGRL2O95490 1459 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 ARHGEF12Q9NZN5 1544 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 GPATCH8Q9UKJ3 1502 aaKnown RBP9.46□□□□□ -0.9
TVP23C-202ENST00000419890 KDM5CP41229 1560 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 FRMPD1Q5SYB0 1578 aa9.46□□□□□ -0.9
TVP23C-202ENST00000419890 RICTORQ6R327 1708 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 HIRIP3Q9BW71 556 aaPredicted RBP9.45□□□□□ -0.9
TVP23C-202ENST00000419890 FAM198AQ9UFP1 575 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 INSRP06213 1382 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 PREX2Q70Z35 1606 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 E9PCH4 1651 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
TVP23C-202ENST00000419890 C3orf80F5H4A9 247 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 NBR1Q14596 966 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 PDIA6Q15084 440 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 PACS2Q86VP3 889 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 UHRF1BP1Q6BDS2 1440 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 POGZQ7Z3K3 1410 aa9.44□□□□□ -0.9
TVP23C-202ENST00000419890 RALGAPBQ86X10 1494 aa9.43□□□□□ -0.9
TVP23C-202ENST00000419890 DHX29Q7Z478 1369 aaKnown RBP9.43□□□□□ -0.9
TVP23C-202ENST00000419890 GFRA3O60609 400 aa9.43□□□□□ -0.9
TVP23C-202ENST00000419890 PPP4CP60510 307 aa9.43□□□□□ -0.9
TVP23C-202ENST00000419890 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
TVP23C-202ENST00000419890 NUDCQ9Y266 331 aa9.43□□□□□ -0.9
TVP23C-202ENST00000419890 KDM5DQ9BY66 1539 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 ZNF518AQ6AHZ1 1483 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 MAGI2Q86UL8 1455 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 ZNF644Q9H582 1327 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-202ENST00000419890 SMAPO00193 183 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 MAP3K7O43318 606 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
TVP23C-202ENST00000419890 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 SAMD7Q7Z3H4 446 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 MPHOSPH9Q99550 1183 aa9.42□□□□□ -0.9
TVP23C-202ENST00000419890 ZFYVE16Q7Z3T8 1539 aa9.41□□□□□ -0.9
TVP23C-202ENST00000419890 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
TVP23C-202ENST00000419890 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
TVP23C-202ENST00000419890 MLECQ14165 292 aa9.41□□□□□ -0.9
TVP23C-202ENST00000419890 CDCA7LQ96GN5 454 aa9.41□□□□□ -0.9
TVP23C-202ENST00000419890 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
TVP23C-202ENST00000419890 DEKP35659 375 aaKnown RBP9.4□□□□□ -0.9
TVP23C-202ENST00000419890 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
TVP23C-202ENST00000419890 MTRQ99707 1265 aa9.4□□□□□ -0.9
TVP23C-202ENST00000419890 PRKD2Q9BZL6 878 aa9.4□□□□□ -0.9
TVP23C-202ENST00000419890 SAMD9LQ8IVG5 1584 aa9.4□□□□□ -0.9
TVP23C-202ENST00000419890 ABCC1P33527 1531 aa9.4□□□□□ -0.91
TVP23C-202ENST00000419890 ATP10AO60312 1499 aa9.4□□□□□ -0.91
TVP23C-202ENST00000419890 PZPP20742 1482 aa9.4□□□□□ -0.91
TVP23C-202ENST00000419890 SHANK2Q9UPX8 1470 aa9.4□□□□□ -0.91
TVP23C-202ENST00000419890 ABCC5O15440 1437 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 BCORL1Q5H9F3 1711 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 PRSS12P56730 875 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
TVP23C-202ENST00000419890 ARHGEF40Q8TER5 1519 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 PLEKHH2Q8IVE3 1493 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
TVP23C-202ENST00000419890 BRD4O60885 1362 aaPredicted RBP9.38□□□□□ -0.91
TVP23C-202ENST00000419890 LAMC1P11047 1609 aa9.38□□□□□ -0.91
TVP23C-202ENST00000419890 LRPPRCP42704 1394 aaKnown RBP9.38□□□□□ -0.91
TVP23C-202ENST00000419890 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
TVP23C-202ENST00000419890 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
TVP23C-202ENST00000419890 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
TVP23C-202ENST00000419890 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
TVP23C-202ENST00000419890 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
TVP23C-202ENST00000419890 IL21Q9HBE4 155 aa9.37□□□□□ -0.91
TVP23C-202ENST00000419890 C9orf84Q5VXU9 1444 aa9.37□□□□□ -0.91
TVP23C-202ENST00000419890 KIF15Q9NS87 1388 aa9.37□□□□□ -0.91
TVP23C-202ENST00000419890 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-202ENST00000419890 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-202ENST00000419890 B4GALNT3Q6L9W6 998 aa9.36□□□□□ -0.91
TVP23C-202ENST00000419890 ZNF516Q92618 1163 aa9.36□□□□□ -0.91
TVP23C-202ENST00000419890 TATDN2Q93075 761 aa9.36□□□□□ -0.91
TVP23C-202ENST00000419890 V9GY48 417 aaPredicted RBP9.36□□□□□ -0.91
TVP23C-202ENST00000419890 HECW2Q9P2P5 1572 aa9.36□□□□□ -0.91
TVP23C-202ENST00000419890 TSPY4P0CV99 314 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 TSPY10P0CW01 314 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 MS4A1P11836 297 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 CCDC184Q52MB2 194 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 RTL5Q5HYW3 569 aaPredicted RBP9.35□□□□□ -0.91
TVP23C-202ENST00000419890 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 FAM9BQ8IZU0 186 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 RRP7BPQ9NSQ0 103 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 ADAMTSL3P82987 1691 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 USP47Q96K76 1375 aa9.35□□□□□ -0.91
TVP23C-202ENST00000419890 CAMSAP2Q08AD1 1489 aa9.34□□□□□ -0.91
TVP23C-202ENST00000419890 C11orf95C9JLR9 678 aaPredicted RBP9.34□□□□□ -0.91
TVP23C-202ENST00000419890 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
TVP23C-202ENST00000419890 PDE3BQ13370 1112 aa9.34□□□□□ -0.91
TVP23C-202ENST00000419890 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
TVP23C-202ENST00000419890 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
TVP23C-202ENST00000419890 CCDC136Q96JN2 1154 aa9.34□□□□□ -0.91
TVP23C-202ENST00000419890 ESF1Q9H501 851 aaKnown RBP9.34□□□□□ -0.91
TVP23C-202ENST00000419890 KIDINS220Q9ULH0 1771 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms