RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 WASLO00401 505 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-204ENST00000419671 TNNT2P45379 298 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-204ENST00000419671 THEMISQ8N1K5 641 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-204ENST00000419671 SLC26A8Q96RN1 970 aa10.83□□□□□ -0.68
COL12A1-204ENST00000419671 CDC42BPGQ6DT37 1551 aa10.83□□□□□ -0.68
COL12A1-204ENST00000419671 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
COL12A1-204ENST00000419671 FYB1O15117 783 aa10.82□□□□□ -0.68
COL12A1-204ENST00000419671 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
COL12A1-204ENST00000419671 PPIP5K1Q6PFW1 1433 aa10.82□□□□□ -0.68
COL12A1-204ENST00000419671 CHD2O14647 1828 aaKnown RBP10.81□□□□□ -0.68
COL12A1-204ENST00000419671 MTHFSP49914 203 aa10.81□□□□□ -0.68
COL12A1-204ENST00000419671 PDE3BQ13370 1112 aa10.81□□□□□ -0.68
COL12A1-204ENST00000419671 RNF123Q5XPI4 1314 aa10.81□□□□□ -0.68
COL12A1-204ENST00000419671 NRKQ7Z2Y5 1582 aa10.8□□□□□ -0.68
COL12A1-204ENST00000419671 HDGFL2Q7Z4V5 671 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-204ENST00000419671 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
COL12A1-204ENST00000419671 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
COL12A1-204ENST00000419671 TBX22Q9Y458 520 aa10.8□□□□□ -0.68
COL12A1-204ENST00000419671 ZNF521Q96K83 1311 aa10.8□□□□□ -0.68
COL12A1-204ENST00000419671 VASPP50552 380 aaPredicted RBP10.8□□□□□ -0.68
COL12A1-204ENST00000419671 PTCH1Q13635 1447 aa10.79□□□□□ -0.68
COL12A1-204ENST00000419671 PRR36Q9H6K5 1346 aa10.79□□□□□ -0.68
COL12A1-204ENST00000419671 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
COL12A1-204ENST00000419671 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
COL12A1-204ENST00000419671 COL3A1P02461 1466 aaPredicted RBP10.79□□□□□ -0.68
COL12A1-204ENST00000419671 NUDT16Q96DE0 195 aaKnown RBP10.78□□□□□ -0.68
COL12A1-204ENST00000419671 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
COL12A1-204ENST00000419671 AMOTL2Q9Y2J4 779 aa10.78□□□□□ -0.68
COL12A1-204ENST00000419671 CCDC61Q9Y6R9 512 aa10.78□□□□□ -0.68
COL12A1-204ENST00000419671 IFNLR1Q8IU57 520 aaPredicted RBP10.77□□□□□ -0.69
COL12A1-204ENST00000419671 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.69
COL12A1-204ENST00000419671 NKTRP30414 1462 aaKnown RBP10.76□□□□□ -0.69
COL12A1-204ENST00000419671 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
COL12A1-204ENST00000419671 APAF1O14727 1248 aa10.76□□□□□ -0.69
COL12A1-204ENST00000419671 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
COL12A1-204ENST00000419671 ERICH6BQ5W0A0 696 aa10.76□□□□□ -0.69
COL12A1-204ENST00000419671 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL12A1-204ENST00000419671 PROM2Q8N271 834 aa10.76□□□□□ -0.69
COL12A1-204ENST00000419671 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
COL12A1-204ENST00000419671 FMN2Q9NZ56 1722 aa10.75□□□□□ -0.69
COL12A1-204ENST00000419671 CFAP53Q96M91 514 aa10.74□□□□□ -0.69
COL12A1-204ENST00000419671 PIK3R4Q99570 1358 aa10.74□□□□□ -0.69
COL12A1-204ENST00000419671 RCAN3Q9UKA8 241 aa10.74□□□□□ -0.69
COL12A1-204ENST00000419671 PNPLA6Q8IY17 1366 aa10.74□□□□□ -0.69
COL12A1-204ENST00000419671 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
COL12A1-204ENST00000419671 KCNA6P17658 529 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 GOLGA2Q08379 1002 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 NME9Q86XW9 330 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 FBLN1P23142 703 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 ANKLE2Q86XL3 938 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 RUNDC1Q96C34 613 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 ARXQ96QS3 562 aa10.72□□□□□ -0.69
COL12A1-204ENST00000419671 PLEKHG3A1L390 1219 aa10.71□□□□□ -0.69
COL12A1-204ENST00000419671 SLFN5Q08AF3 891 aa10.71□□□□□ -0.69
COL12A1-204ENST00000419671 TRMT2AQ8IZ69 625 aaKnown RBP10.71□□□□□ -0.69
COL12A1-204ENST00000419671 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-204ENST00000419671 SPINK5Q9NQ38 1064 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-204ENST00000419671 PPP4R2Q9NY27 417 aa10.71□□□□□ -0.69
COL12A1-204ENST00000419671 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
COL12A1-204ENST00000419671 USP6P35125 1406 aa10.71□□□□□ -0.7
COL12A1-204ENST00000419671 ACEP12821 1306 aa10.71□□□□□ -0.7
COL12A1-204ENST00000419671 RRP1P56182 461 aaKnown RBP10.7□□□□□ -0.7
COL12A1-204ENST00000419671 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 MARF1Q9Y4F3 1742 aaKnown RBP10.7□□□□□ -0.7
COL12A1-204ENST00000419671 U2AF1L5P0DN76 240 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-204ENST00000419671 U2AF1Q01081 240 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL12A1-204ENST00000419671 SSH2Q76I76 1423 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
COL12A1-204ENST00000419671 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
COL12A1-204ENST00000419671 CDK12Q9NYV4 1490 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-204ENST00000419671 AATKQ6ZMQ8 1374 aa10.69□□□□□ -0.7
COL12A1-204ENST00000419671 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 PLEKHF1Q96S99 279 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 LRRC7Q96NW7 1537 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-204ENST00000419671 DLG5Q8TDM6 1919 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 PEAK1Q9H792 1746 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 RRP7AQ9Y3A4 280 aaKnown RBP10.68□□□□□ -0.7
COL12A1-204ENST00000419671 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
COL12A1-204ENST00000419671 ANKARQ7Z5J8 1434 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
COL12A1-204ENST00000419671 DIAPH1O60610 1272 aaKnown RBP10.67□□□□□ -0.7
COL12A1-204ENST00000419671 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 B4GALNT3Q6L9W6 998 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 COG3Q96JB2 828 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 USP54Q70EL1 1684 aa10.67□□□□□ -0.7
COL12A1-204ENST00000419671 E9PSI1 815 aa10.66□□□□□ -0.7
COL12A1-204ENST00000419671 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
COL12A1-204ENST00000419671 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
COL12A1-204ENST00000419671 CCDC27Q2M243 656 aa10.66□□□□□ -0.7
COL12A1-204ENST00000419671 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
COL12A1-204ENST00000419671 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
COL12A1-204ENST00000419671 PLIN1O60240 522 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms