RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 AMER1Q5JTC6 1135 aaPredicted RBP17.33■□□□□ 0.36
LINC00642-201ENST00000419459 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
LINC00642-201ENST00000419459 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
LINC00642-201ENST00000419459 POLR3AO14802 1390 aaPredicted RBP17.32■□□□□ 0.36
LINC00642-201ENST00000419459 USP6P35125 1406 aa17.31■□□□□ 0.36
LINC00642-201ENST00000419459 PRKRIP1Q9H875 184 aaPredicted RBP17.3■□□□□ 0.36
LINC00642-201ENST00000419459 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
LINC00642-201ENST00000419459 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
LINC00642-201ENST00000419459 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
LINC00642-201ENST00000419459 EDC4Q6P2E9 1401 aaKnown RBP17.28■□□□□ 0.36
LINC00642-201ENST00000419459 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
LINC00642-201ENST00000419459 CGNL1Q0VF96 1302 aa17.28■□□□□ 0.36
LINC00642-201ENST00000419459 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
LINC00642-201ENST00000419459 MSH5O43196 834 aa17.28■□□□□ 0.36
LINC00642-201ENST00000419459 NME9Q86XW9 330 aa17.28■□□□□ 0.36
LINC00642-201ENST00000419459 FYB1O15117 783 aa17.27■□□□□ 0.36
LINC00642-201ENST00000419459 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
LINC00642-201ENST00000419459 TNNT2P45379 298 aaPredicted RBP17.27■□□□□ 0.36
LINC00642-201ENST00000419459 PSME1Q06323 249 aa17.27■□□□□ 0.36
LINC00642-201ENST00000419459 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
LINC00642-201ENST00000419459 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
LINC00642-201ENST00000419459 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
LINC00642-201ENST00000419459 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
LINC00642-201ENST00000419459 SSH2Q76I76 1423 aa17.25■□□□□ 0.35
LINC00642-201ENST00000419459 PIK3C2AO00443 1686 aa17.25■□□□□ 0.35
LINC00642-201ENST00000419459 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
LINC00642-201ENST00000419459 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
LINC00642-201ENST00000419459 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
LINC00642-201ENST00000419459 FBLN1P23142 703 aa17.23■□□□□ 0.35
LINC00642-201ENST00000419459 ERICH6Q7L0X2 663 aa17.23■□□□□ 0.35
LINC00642-201ENST00000419459 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
LINC00642-201ENST00000419459 TRPM3Q9HCF6 1732 aaPredicted RBP17.22■□□□□ 0.35
LINC00642-201ENST00000419459 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
LINC00642-201ENST00000419459 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
LINC00642-201ENST00000419459 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 SOX12O15370 315 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 ABTB2Q8N961 1025 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
LINC00642-201ENST00000419459 NPC1L1Q9UHC9 1359 aa17.21■□□□□ 0.34
LINC00642-201ENST00000419459 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
LINC00642-201ENST00000419459 PXDNQ92626 1479 aa17.2■□□□□ 0.34
LINC00642-201ENST00000419459 MARF1Q9Y4F3 1742 aaKnown RBP17.2■□□□□ 0.34
LINC00642-201ENST00000419459 NHSL1Q5SYE7 1610 aa17.19■□□□□ 0.34
LINC00642-201ENST00000419459 TOM1O60784 492 aa17.18■□□□□ 0.34
LINC00642-201ENST00000419459 NSD2O96028 1365 aa17.18■□□□□ 0.34
LINC00642-201ENST00000419459 NLRP6P59044 892 aa17.18■□□□□ 0.34
LINC00642-201ENST00000419459 RALBP1Q15311 655 aa17.18■□□□□ 0.34
LINC00642-201ENST00000419459 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
LINC00642-201ENST00000419459 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
LINC00642-201ENST00000419459 OVOS2A0A0J9YW53 1432 aa17.17■□□□□ 0.34
LINC00642-201ENST00000419459 OVOS2Q6IE36 1432 aa17.17■□□□□ 0.34
LINC00642-201ENST00000419459 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
LINC00642-201ENST00000419459 COG3Q96JB2 828 aa17.16■□□□□ 0.34
LINC00642-201ENST00000419459 MAP2P11137 1827 aaKnown RBP17.16■□□□□ 0.34
LINC00642-201ENST00000419459 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
LINC00642-201ENST00000419459 PPP2R1AP30153 589 aa17.15■□□□□ 0.34
LINC00642-201ENST00000419459 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00642-201ENST00000419459 SOS2Q07890 1332 aaPredicted RBP17.13■□□□□ 0.33
LINC00642-201ENST00000419459 IQSEC2Q5JU85 1478 aa17.13■□□□□ 0.33
LINC00642-201ENST00000419459 RRS1Q15050 365 aaKnown RBP17.13■□□□□ 0.33
LINC00642-201ENST00000419459 TNS3Q68CZ2 1445 aa17.13■□□□□ 0.33
LINC00642-201ENST00000419459 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
LINC00642-201ENST00000419459 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
LINC00642-201ENST00000419459 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
LINC00642-201ENST00000419459 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
LINC00642-201ENST00000419459 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
LINC00642-201ENST00000419459 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
LINC00642-201ENST00000419459 EMILIN1Q9Y6C2 1016 aa17.11■□□□□ 0.33
LINC00642-201ENST00000419459 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
LINC00642-201ENST00000419459 MTHFSP49914 203 aa17.1■□□□□ 0.33
LINC00642-201ENST00000419459 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
LINC00642-201ENST00000419459 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
LINC00642-201ENST00000419459 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
LINC00642-201ENST00000419459 MED1Q15648 1581 aaPredicted RBP17.1■□□□□ 0.33
LINC00642-201ENST00000419459 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
LINC00642-201ENST00000419459 COL16A1Q07092 1604 aaPredicted RBP17.08■□□□□ 0.32
LINC00642-201ENST00000419459 LTN1O94822 1766 aa17.08■□□□□ 0.32
LINC00642-201ENST00000419459 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
LINC00642-201ENST00000419459 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
LINC00642-201ENST00000419459 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
LINC00642-201ENST00000419459 ZBTB7CA1YPR0 619 aa17.06■□□□□ 0.32
LINC00642-201ENST00000419459 PEAK1Q9H792 1746 aa17.06■□□□□ 0.32
LINC00642-201ENST00000419459 GCP02774 474 aa17.06■□□□□ 0.32
LINC00642-201ENST00000419459 NFAT5O94916 1531 aa17.05■□□□□ 0.32
LINC00642-201ENST00000419459 MAP3K19Q56UN5 1328 aa17.05■□□□□ 0.32
LINC00642-201ENST00000419459 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
LINC00642-201ENST00000419459 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
LINC00642-201ENST00000419459 USP19O94966 1318 aa17.04■□□□□ 0.32
LINC00642-201ENST00000419459 SLIT3O75094 1523 aa17.04■□□□□ 0.32
LINC00642-201ENST00000419459 ZC3H6P61129 1189 aaKnown RBP17.04■□□□□ 0.32
LINC00642-201ENST00000419459 ABCA3Q99758 1704 aa17.04■□□□□ 0.32
LINC00642-201ENST00000419459 AATKQ6ZMQ8 1374 aa17.04■□□□□ 0.32
LINC00642-201ENST00000419459 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
LINC00642-201ENST00000419459 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
LINC00642-201ENST00000419459 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
LINC00642-201ENST00000419459 SHPRHQ149N8 1683 aa17.01■□□□□ 0.31
LINC00642-201ENST00000419459 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
LINC00642-201ENST00000419459 RGPD5Q99666 1765 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms