RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 FAM83GA6ND36 823 aa16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 CRYBG1Q9Y4K1 1723 aa16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 GPRASP1Q5JY77 1395 aa16.75■□□□□ 0.27
THUMPD3-204ENST00000419437 ITSN1Q15811 1721 aa16.74■□□□□ 0.27
THUMPD3-204ENST00000419437 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
THUMPD3-204ENST00000419437 NGDNQ8NEJ9 315 aaKnown RBP16.73■□□□□ 0.27
THUMPD3-204ENST00000419437 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
THUMPD3-204ENST00000419437 LRP5O75197 1615 aa16.73■□□□□ 0.27
THUMPD3-204ENST00000419437 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
THUMPD3-204ENST00000419437 CENPJQ9HC77 1338 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-204ENST00000419437 DEFB132Q7Z7B7 95 aa16.72■□□□□ 0.27
THUMPD3-204ENST00000419437 TONSLQ96HA7 1378 aa16.72■□□□□ 0.27
THUMPD3-204ENST00000419437 ARHGEF28Q8N1W1 1705 aaKnown RBP16.71■□□□□ 0.27
THUMPD3-204ENST00000419437 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
THUMPD3-204ENST00000419437 ROCK2O75116 1388 aaKnown RBP16.7■□□□□ 0.26
THUMPD3-204ENST00000419437 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
THUMPD3-204ENST00000419437 BTG4Q9NY30 223 aa16.7■□□□□ 0.26
THUMPD3-204ENST00000419437 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
THUMPD3-204ENST00000419437 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
THUMPD3-204ENST00000419437 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
THUMPD3-204ENST00000419437 BAG6P46379 1132 aa16.68■□□□□ 0.26
THUMPD3-204ENST00000419437 FAM98CQ17RN3 349 aaKnown RBP16.68■□□□□ 0.26
THUMPD3-204ENST00000419437 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
THUMPD3-204ENST00000419437 A0A0G2JS52 829 aa16.67■□□□□ 0.26
THUMPD3-204ENST00000419437 MYT1Q01538 1121 aa16.67■□□□□ 0.26
THUMPD3-204ENST00000419437 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
THUMPD3-204ENST00000419437 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
THUMPD3-204ENST00000419437 CARD11Q9BXL7 1154 aa16.66■□□□□ 0.26
THUMPD3-204ENST00000419437 PHRF1Q9P1Y6 1649 aaKnown RBP16.66■□□□□ 0.26
THUMPD3-204ENST00000419437 ATP7BP35670 1465 aa16.66■□□□□ 0.26
THUMPD3-204ENST00000419437 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
THUMPD3-204ENST00000419437 ACEP12821 1306 aa16.65■□□□□ 0.26
THUMPD3-204ENST00000419437 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
THUMPD3-204ENST00000419437 PLEKHG3A1L390 1219 aa16.64■□□□□ 0.25
THUMPD3-204ENST00000419437 TOPAZ1Q8N9V7 1692 aa16.64■□□□□ 0.25
THUMPD3-204ENST00000419437 TRPM1Q7Z4N2 1603 aa16.63■□□□□ 0.25
THUMPD3-204ENST00000419437 PRDM11Q9NQV5 511 aa16.63■□□□□ 0.25
THUMPD3-204ENST00000419437 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
THUMPD3-204ENST00000419437 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
THUMPD3-204ENST00000419437 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
THUMPD3-204ENST00000419437 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
THUMPD3-204ENST00000419437 SPATA31A1Q5TZJ5 1347 aa16.6■□□□□ 0.25
THUMPD3-204ENST00000419437 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
THUMPD3-204ENST00000419437 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
THUMPD3-204ENST00000419437 QRICH2Q9H0J4 1663 aa16.58■□□□□ 0.24
THUMPD3-204ENST00000419437 EN1Q05925 392 aaPredicted RBP16.57■□□□□ 0.24
THUMPD3-204ENST00000419437 ABTB2Q8N961 1025 aa16.57■□□□□ 0.24
THUMPD3-204ENST00000419437 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
THUMPD3-204ENST00000419437 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
THUMPD3-204ENST00000419437 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
THUMPD3-204ENST00000419437 FAM196AQ6ZSG2 479 aa16.56■□□□□ 0.24
THUMPD3-204ENST00000419437 CPDO75976 1380 aa16.55■□□□□ 0.24
THUMPD3-204ENST00000419437 FAM182BQ5T319 152 aa16.55■□□□□ 0.24
THUMPD3-204ENST00000419437 LMO7Q8WWI1 1683 aa16.55■□□□□ 0.24
THUMPD3-204ENST00000419437 CHRNA2Q15822 529 aa16.54■□□□□ 0.24
THUMPD3-204ENST00000419437 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
THUMPD3-204ENST00000419437 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
THUMPD3-204ENST00000419437 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
THUMPD3-204ENST00000419437 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
THUMPD3-204ENST00000419437 STRN4Q9NRL3 753 aa16.53■□□□□ 0.24
THUMPD3-204ENST00000419437 RREB1Q92766 1687 aa16.53■□□□□ 0.24
THUMPD3-204ENST00000419437 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
THUMPD3-204ENST00000419437 USP19O94966 1318 aa16.52■□□□□ 0.24
THUMPD3-204ENST00000419437 ST20-MTHFSA0A0A6YYL1 179 aa16.52■□□□□ 0.24
THUMPD3-204ENST00000419437 CAMKK2Q96RR4 588 aa16.52■□□□□ 0.24
THUMPD3-204ENST00000419437 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 TRIM37O94972 964 aa16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 EVA1CP58658 441 aa16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 R3HDM1Q15032 1099 aaKnown RBP16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
THUMPD3-204ENST00000419437 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 NLRP6P59044 892 aa16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 THRAP3Q9Y2W1 955 aaKnown RBP16.5■□□□□ 0.23
THUMPD3-204ENST00000419437 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
THUMPD3-204ENST00000419437 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
THUMPD3-204ENST00000419437 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
THUMPD3-204ENST00000419437 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
THUMPD3-204ENST00000419437 APBA3O96018 575 aa16.48■□□□□ 0.23
THUMPD3-204ENST00000419437 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
THUMPD3-204ENST00000419437 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
THUMPD3-204ENST00000419437 USP6P35125 1406 aa16.47■□□□□ 0.23
THUMPD3-204ENST00000419437 GCP02774 474 aa16.47■□□□□ 0.23
THUMPD3-204ENST00000419437 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
THUMPD3-204ENST00000419437 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
THUMPD3-204ENST00000419437 COL5A2P05997 1499 aaPredicted RBP16.47■□□□□ 0.23
THUMPD3-204ENST00000419437 ZBTB7CA1YPR0 619 aa16.46■□□□□ 0.23
THUMPD3-204ENST00000419437 TESK2Q96S53 571 aa16.46■□□□□ 0.23
THUMPD3-204ENST00000419437 RGPD3A6NKT7 1758 aaPredicted RBP16.46■□□□□ 0.22
THUMPD3-204ENST00000419437 RGPD4Q7Z3J3 1758 aa16.46■□□□□ 0.22
THUMPD3-204ENST00000419437 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
THUMPD3-204ENST00000419437 KTN1Q86UP2 1357 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms