RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
NUP50-205ENST00000419387 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
NUP50-205ENST00000419387 KCNA4P22459 653 aa13.62□□□□□ -0.23
NUP50-205ENST00000419387 FAM83GA6ND36 823 aa13.61□□□□□ -0.23
NUP50-205ENST00000419387 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
NUP50-205ENST00000419387 VPS72Q15906 364 aa13.61□□□□□ -0.23
NUP50-205ENST00000419387 L3MBTL2Q969R5 705 aa13.61□□□□□ -0.23
NUP50-205ENST00000419387 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
NUP50-205ENST00000419387 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.6□□□□□ -0.23
NUP50-205ENST00000419387 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
NUP50-205ENST00000419387 ATP7BP35670 1465 aa13.6□□□□□ -0.23
NUP50-205ENST00000419387 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
NUP50-205ENST00000419387 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
NUP50-205ENST00000419387 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
NUP50-205ENST00000419387 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
NUP50-205ENST00000419387 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
NUP50-205ENST00000419387 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
NUP50-205ENST00000419387 CENPJQ9HC77 1338 aaPredicted RBP13.58□□□□□ -0.24
NUP50-205ENST00000419387 GLI3P10071 1580 aa13.58□□□□□ -0.24
NUP50-205ENST00000419387 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
NUP50-205ENST00000419387 NBPF8Q3BBV2 869 aa13.57□□□□□ -0.24
NUP50-205ENST00000419387 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
NUP50-205ENST00000419387 ACEP12821 1306 aa13.57□□□□□ -0.24
NUP50-205ENST00000419387 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
NUP50-205ENST00000419387 ONECUT3O60422 494 aaPredicted RBP13.56□□□□□ -0.24
NUP50-205ENST00000419387 SEPT12Q8IYM1 358 aa13.56□□□□□ -0.24
NUP50-205ENST00000419387 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
NUP50-205ENST00000419387 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
NUP50-205ENST00000419387 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
NUP50-205ENST00000419387 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
NUP50-205ENST00000419387 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
NUP50-205ENST00000419387 PLCH1Q4KWH8 1693 aa13.54□□□□□ -0.24
NUP50-205ENST00000419387 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
NUP50-205ENST00000419387 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
NUP50-205ENST00000419387 PRDM11Q9NQV5 511 aa13.53□□□□□ -0.24
NUP50-205ENST00000419387 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
NUP50-205ENST00000419387 ZNF219Q9P2Y4 722 aaPredicted RBP13.52□□□□□ -0.25
NUP50-205ENST00000419387 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
NUP50-205ENST00000419387 COL14A1Q05707 1796 aaKnown RBP13.52□□□□□ -0.25
NUP50-205ENST00000419387 PPIP5K1Q6PFW1 1433 aa13.51□□□□□ -0.25
NUP50-205ENST00000419387 ZC3H6P61129 1189 aaKnown RBP13.51□□□□□ -0.25
NUP50-205ENST00000419387 FAM98CQ17RN3 349 aaKnown RBP13.51□□□□□ -0.25
NUP50-205ENST00000419387 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
NUP50-205ENST00000419387 ROCK2O75116 1388 aaKnown RBP13.5□□□□□ -0.25
NUP50-205ENST00000419387 KIAA0232Q92628 1395 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 A0A0G2JS52 829 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 MYT1Q01538 1121 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 CRYBG1Q9Y4K1 1723 aa13.5□□□□□ -0.25
NUP50-205ENST00000419387 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
NUP50-205ENST00000419387 NLRP13Q86W25 1043 aa13.49□□□□□ -0.25
NUP50-205ENST00000419387 NRAPQ86VF7 1730 aa13.49□□□□□ -0.25
NUP50-205ENST00000419387 TRPM1Q7Z4N2 1603 aa13.49□□□□□ -0.25
NUP50-205ENST00000419387 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
NUP50-205ENST00000419387 BRWD3Q6RI45 1802 aa13.48□□□□□ -0.25
NUP50-205ENST00000419387 BRD4O60885 1362 aaPredicted RBP13.48□□□□□ -0.25
NUP50-205ENST00000419387 QRICH2Q9H0J4 1663 aa13.47□□□□□ -0.25
NUP50-205ENST00000419387 USP19O94966 1318 aa13.47□□□□□ -0.25
NUP50-205ENST00000419387 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
NUP50-205ENST00000419387 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
NUP50-205ENST00000419387 GCP02774 474 aa13.46□□□□□ -0.25
NUP50-205ENST00000419387 EVA1CP58658 441 aa13.46□□□□□ -0.25
NUP50-205ENST00000419387 STRN4Q9NRL3 753 aa13.46□□□□□ -0.25
NUP50-205ENST00000419387 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.26
NUP50-205ENST00000419387 SPATA31A1Q5TZJ5 1347 aa13.45□□□□□ -0.26
NUP50-205ENST00000419387 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
NUP50-205ENST00000419387 ABCB7O75027 752 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 NLRP6P59044 892 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
NUP50-205ENST00000419387 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 USP6P35125 1406 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 CPDO75976 1380 aa13.44□□□□□ -0.26
NUP50-205ENST00000419387 EP400Q96L91 3159 aa13.43□□□□□ -0.26
NUP50-205ENST00000419387 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
NUP50-205ENST00000419387 NRKQ7Z2Y5 1582 aa13.42□□□□□ -0.26
NUP50-205ENST00000419387 SSH2Q76I76 1423 aa13.42□□□□□ -0.26
NUP50-205ENST00000419387 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
NUP50-205ENST00000419387 FAM182BQ5T319 152 aa13.41□□□□□ -0.26
NUP50-205ENST00000419387 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
NUP50-205ENST00000419387 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
NUP50-205ENST00000419387 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
NUP50-205ENST00000419387 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
NUP50-205ENST00000419387 BAG6P46379 1132 aa13.4□□□□□ -0.26
NUP50-205ENST00000419387 THSD7AQ9UPZ6 1657 aa13.4□□□□□ -0.26
NUP50-205ENST00000419387 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
NUP50-205ENST00000419387 TCP11L2Q8N4U5 519 aa13.39□□□□□ -0.27
NUP50-205ENST00000419387 THRAP3Q9Y2W1 955 aaKnown RBP13.39□□□□□ -0.27
NUP50-205ENST00000419387 SBNO2Q9Y2G9 1366 aa13.39□□□□□ -0.27
NUP50-205ENST00000419387 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
NUP50-205ENST00000419387 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
NUP50-205ENST00000419387 FAM196AQ6ZSG2 479 aa13.38□□□□□ -0.27
NUP50-205ENST00000419387 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
NUP50-205ENST00000419387 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
NUP50-205ENST00000419387 AATKQ6ZMQ8 1374 aa13.37□□□□□ -0.27
NUP50-205ENST00000419387 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
NUP50-205ENST00000419387 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms