RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 NGDNQ8NEJ9 315 aaKnown RBP26.73■■□□□ 1.87
COPS8-204ENST00000419015 NUDT16Q96DE0 195 aaKnown RBP26.72■■□□□ 1.87
COPS8-204ENST00000419015 TOPAZ1Q8N9V7 1692 aa26.72■■□□□ 1.87
COPS8-204ENST00000419015 BTG4Q9NY30 223 aa26.71■■□□□ 1.87
COPS8-204ENST00000419015 ZRANB1Q9UGI0 708 aa26.71■■□□□ 1.87
COPS8-204ENST00000419015 CCDC9Q9Y3X0 531 aaKnown RBP26.71■■□□□ 1.87
COPS8-204ENST00000419015 KRT27Q7Z3Y8 459 aa26.68■■□□□ 1.86
COPS8-204ENST00000419015 PAK3O75914 559 aaPredicted RBP26.67■■□□□ 1.86
COPS8-204ENST00000419015 CDK19Q9BWU1 502 aa26.67■■□□□ 1.86
COPS8-204ENST00000419015 PHRF1Q9P1Y6 1649 aaKnown RBP26.67■■□□□ 1.86
COPS8-204ENST00000419015 POLR3AO14802 1390 aaPredicted RBP26.66■■□□□ 1.86
COPS8-204ENST00000419015 NBPF1Q3BBV0 1214 aa26.65■■□□□ 1.86
COPS8-204ENST00000419015 DEFB132Q7Z7B7 95 aa26.65■■□□□ 1.86
COPS8-204ENST00000419015 FAM98CQ17RN3 349 aaKnown RBP26.64■■□□□ 1.86
COPS8-204ENST00000419015 SPATA31A5Q5VU36 1347 aa26.63■■□□□ 1.85
COPS8-204ENST00000419015 SPATA31A7Q8IWB4 1347 aa26.63■■□□□ 1.85
COPS8-204ENST00000419015 CCDC61Q9Y6R9 512 aa26.62■■□□□ 1.85
COPS8-204ENST00000419015 THSD7AQ9UPZ6 1657 aa26.62■■□□□ 1.85
COPS8-204ENST00000419015 ACEP12821 1306 aa26.62■■□□□ 1.85
COPS8-204ENST00000419015 PLEKHG3A1L390 1219 aa26.6■■□□□ 1.85
COPS8-204ENST00000419015 PRDM11Q9NQV5 511 aa26.6■■□□□ 1.85
COPS8-204ENST00000419015 KIAA0232Q92628 1395 aa26.59■■□□□ 1.85
COPS8-204ENST00000419015 NBPF8Q3BBV2 869 aa26.59■■□□□ 1.85
COPS8-204ENST00000419015 SF3B2Q13435 895 aaKnown RBP26.58■■□□□ 1.85
COPS8-204ENST00000419015 A0A0G2JS52 829 aa26.57■■□□□ 1.84
COPS8-204ENST00000419015 MYT1Q01538 1121 aa26.57■■□□□ 1.84
COPS8-204ENST00000419015 NRKQ7Z2Y5 1582 aa26.55■■□□□ 1.84
COPS8-204ENST00000419015 CHRNA2Q15822 529 aa26.54■■□□□ 1.84
COPS8-204ENST00000419015 NUTM2GQ5VZR2 741 aa26.54■■□□□ 1.84
COPS8-204ENST00000419015 QRICH2Q9H0J4 1663 aa26.54■■□□□ 1.84
COPS8-204ENST00000419015 SPATA31A1Q5TZJ5 1347 aa26.53■■□□□ 1.84
COPS8-204ENST00000419015 CENPJQ9HC77 1338 aaPredicted RBP26.53■■□□□ 1.84
COPS8-204ENST00000419015 RGPD1P0DJD0 1748 aa26.53■■□□□ 1.84
COPS8-204ENST00000419015 PPIP5K1Q6PFW1 1433 aa26.51■■□□□ 1.83
COPS8-204ENST00000419015 ZC3H6P61129 1189 aaKnown RBP26.51■■□□□ 1.83
COPS8-204ENST00000419015 LMO7Q8WWI1 1683 aa26.5■■□□□ 1.83
COPS8-204ENST00000419015 USP19O94966 1318 aa26.5■■□□□ 1.83
COPS8-204ENST00000419015 FAM182BQ5T319 152 aa26.5■■□□□ 1.83
COPS8-204ENST00000419015 TNS1Q9HBL0 1735 aaKnown RBP26.5■■□□□ 1.83
COPS8-204ENST00000419015 ABTB2Q8N961 1025 aa26.49■■□□□ 1.83
COPS8-204ENST00000419015 CPDO75976 1380 aa26.48■■□□□ 1.83
COPS8-204ENST00000419015 CAMTA1Q9Y6Y1 1673 aa26.48■■□□□ 1.83
COPS8-204ENST00000419015 BAG6P46379 1132 aa26.48■■□□□ 1.83
COPS8-204ENST00000419015 SRPK2P78362 688 aaKnown RBP26.48■■□□□ 1.83
COPS8-204ENST00000419015 L3MBTL2Q969R5 705 aa26.48■■□□□ 1.83
COPS8-204ENST00000419015 CABP2Q9NPB3 220 aa26.48■■□□□ 1.83
COPS8-204ENST00000419015 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
COPS8-204ENST00000419015 SSH2Q76I76 1423 aa26.47■■□□□ 1.83
COPS8-204ENST00000419015 TRPM1Q7Z4N2 1603 aa26.47■■□□□ 1.83
COPS8-204ENST00000419015 DISP2A7MBM2 1401 aa26.45■■□□□ 1.82
COPS8-204ENST00000419015 BRD4O60885 1362 aaPredicted RBP26.44■■□□□ 1.82
COPS8-204ENST00000419015 LRP5O75197 1615 aa26.43■■□□□ 1.82
COPS8-204ENST00000419015 EN1Q05925 392 aaPredicted RBP26.42■■□□□ 1.82
COPS8-204ENST00000419015 SIN3AQ96ST3 1273 aa26.42■■□□□ 1.82
COPS8-204ENST00000419015 USP6P35125 1406 aa26.41■■□□□ 1.82
COPS8-204ENST00000419015 GCP02774 474 aa26.41■■□□□ 1.82
COPS8-204ENST00000419015 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
COPS8-204ENST00000419015 NLRP13Q86W25 1043 aa26.41■■□□□ 1.82
COPS8-204ENST00000419015 CABP1Q9NZU7 370 aa26.4■■□□□ 1.82
COPS8-204ENST00000419015 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.82
COPS8-204ENST00000419015 USP35Q9P2H5 1018 aa26.39■■□□□ 1.82
COPS8-204ENST00000419015 EVA1CP58658 441 aa26.38■■□□□ 1.81
COPS8-204ENST00000419015 SLIT3O75094 1523 aa26.38■■□□□ 1.81
COPS8-204ENST00000419015 COL5A2P05997 1499 aaPredicted RBP26.37■■□□□ 1.81
COPS8-204ENST00000419015 FAM196AQ6ZSG2 479 aa26.37■■□□□ 1.81
COPS8-204ENST00000419015 PIK3C2AO00443 1686 aa26.37■■□□□ 1.81
COPS8-204ENST00000419015 PSDA5PKW4 1024 aaPredicted RBP26.35■■□□□ 1.81
COPS8-204ENST00000419015 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
COPS8-204ENST00000419015 TCP11L2Q8N4U5 519 aa26.34■■□□□ 1.81
COPS8-204ENST00000419015 COL18A1P39060 1754 aa26.33■■□□□ 1.81
COPS8-204ENST00000419015 TRIM37O94972 964 aa26.33■■□□□ 1.81
COPS8-204ENST00000419015 EVC2Q86UK5 1308 aa26.33■■□□□ 1.81
COPS8-204ENST00000419015 AKAP12Q02952 1782 aa26.33■■□□□ 1.8
COPS8-204ENST00000419015 EZH2Q15910 746 aaKnown RBP26.32■■□□□ 1.8
COPS8-204ENST00000419015 CAMKK2Q96RR4 588 aa26.32■■□□□ 1.8
COPS8-204ENST00000419015 THRAP3Q9Y2W1 955 aaKnown RBP26.32■■□□□ 1.8
COPS8-204ENST00000419015 ROCK2O75116 1388 aaKnown RBP26.32■■□□□ 1.8
COPS8-204ENST00000419015 NLRP6P59044 892 aa26.31■■□□□ 1.8
COPS8-204ENST00000419015 AATKQ6ZMQ8 1374 aa26.31■■□□□ 1.8
COPS8-204ENST00000419015 PDE3BQ13370 1112 aa26.29■■□□□ 1.8
COPS8-204ENST00000419015 NEUROD1Q13562 356 aa26.29■■□□□ 1.8
COPS8-204ENST00000419015 CRB1P82279 1406 aa26.29■■□□□ 1.8
COPS8-204ENST00000419015 RREB1Q92766 1687 aa26.28■■□□□ 1.8
COPS8-204ENST00000419015 PARD3Q8TEW0 1356 aa26.26■■□□□ 1.79
COPS8-204ENST00000419015 R3HDM1Q15032 1099 aaKnown RBP26.26■■□□□ 1.79
COPS8-204ENST00000419015 PEAK1Q9H792 1746 aa26.25■■□□□ 1.79
COPS8-204ENST00000419015 CPSF1Q10570 1443 aaKnown RBP26.25■■□□□ 1.79
COPS8-204ENST00000419015 TTC21BQ7Z4L5 1316 aa26.25■■□□□ 1.79
COPS8-204ENST00000419015 APBA3O96018 575 aa26.25■■□□□ 1.79
COPS8-204ENST00000419015 ZNF692Q9BU19 519 aaPredicted RBP26.25■■□□□ 1.79
COPS8-204ENST00000419015 NUP188Q5SRE5 1749 aa26.24■■□□□ 1.79
COPS8-204ENST00000419015 LRRC37A3O60309 1634 aa26.24■■□□□ 1.79
COPS8-204ENST00000419015 WNK3Q9BYP7 1800 aa26.23■■□□□ 1.79
COPS8-204ENST00000419015 RGPD5Q99666 1765 aa26.23■■□□□ 1.79
COPS8-204ENST00000419015 AXIN2Q9Y2T1 843 aa26.23■■□□□ 1.79
COPS8-204ENST00000419015 SBF2Q86WG5 1849 aa26.22■■□□□ 1.79
COPS8-204ENST00000419015 MON2Q7Z3U7 1717 aa26.22■■□□□ 1.79
COPS8-204ENST00000419015 SBNO2Q9Y2G9 1366 aa26.21■■□□□ 1.79
COPS8-204ENST00000419015 ZBTB7CA1YPR0 619 aa26.21■■□□□ 1.79
COPS8-204ENST00000419015 ARHGEF25Q86VW2 580 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms