RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 NWD1Q149M9 1564 aa11.97□□□□□ -0.49
LINCMD1-201ENST00000418518 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
LINCMD1-201ENST00000418518 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
LINCMD1-201ENST00000418518 SSH2Q76I76 1423 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 ANKARQ7Z5J8 1434 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 APAF1O14727 1248 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 IRX6P78412 446 aaPredicted RBP11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 GOLGA2Q08379 1002 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 RUNDC1Q96C34 613 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 GGNBP2Q9H3C7 697 aa11.96□□□□□ -0.49
LINCMD1-201ENST00000418518 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 SENP3-EIF4A1A0A087X0R7 540 aa11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 PLEKHG3A1L390 1219 aa11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
LINCMD1-201ENST00000418518 USP6P35125 1406 aa11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 CCDC146Q8IYE0 955 aa11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
LINCMD1-201ENST00000418518 E9PSI1 815 aa11.93□□□□□ -0.5
LINCMD1-201ENST00000418518 SLC26A8Q96RN1 970 aa11.93□□□□□ -0.5
LINCMD1-201ENST00000418518 RGPD1P0DJD0 1748 aa11.92□□□□□ -0.5
LINCMD1-201ENST00000418518 PIK3C2AO00443 1686 aa11.92□□□□□ -0.5
LINCMD1-201ENST00000418518 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
LINCMD1-201ENST00000418518 DLG5Q8TDM6 1919 aa11.91□□□□□ -0.5
LINCMD1-201ENST00000418518 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
LINCMD1-201ENST00000418518 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
LINCMD1-201ENST00000418518 TCP11L2Q8N4U5 519 aa11.9□□□□□ -0.5
LINCMD1-201ENST00000418518 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
LINCMD1-201ENST00000418518 USP31Q70CQ4 1352 aa11.9□□□□□ -0.5
LINCMD1-201ENST00000418518 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
LINCMD1-201ENST00000418518 ANKLE2Q86XL3 938 aa11.89□□□□□ -0.51
LINCMD1-201ENST00000418518 POLKQ9UBT6 870 aa11.89□□□□□ -0.51
LINCMD1-201ENST00000418518 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 NCKAP5LQ9HCH0 1330 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 NME9Q86XW9 330 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 TSHZ2Q9NRE2 1034 aa11.88□□□□□ -0.51
LINCMD1-201ENST00000418518 ACEP12821 1306 aa11.87□□□□□ -0.51
LINCMD1-201ENST00000418518 U2AF1L5P0DN76 240 aaPredicted RBP11.87□□□□□ -0.51
LINCMD1-201ENST00000418518 U2AF1Q01081 240 aaKnown RBP eCLIP11.87□□□□□ -0.51
LINCMD1-201ENST00000418518 COG3Q96JB2 828 aa11.87□□□□□ -0.51
LINCMD1-201ENST00000418518 DMRT2Q9Y5R5 561 aa11.87□□□□□ -0.51
LINCMD1-201ENST00000418518 KCNA6P17658 529 aa11.86□□□□□ -0.51
LINCMD1-201ENST00000418518 PNNQ9H307 717 aaKnown RBP11.86□□□□□ -0.51
LINCMD1-201ENST00000418518 IL16Q14005 1332 aa11.86□□□□□ -0.51
LINCMD1-201ENST00000418518 FCHSD2O94868 740 aa11.85□□□□□ -0.51
LINCMD1-201ENST00000418518 PHRF1Q9P1Y6 1649 aaKnown RBP11.85□□□□□ -0.51
LINCMD1-201ENST00000418518 B4GALNT3Q6L9W6 998 aa11.84□□□□□ -0.51
LINCMD1-201ENST00000418518 PLPPR3Q6T4P5 718 aa11.84□□□□□ -0.51
LINCMD1-201ENST00000418518 RSPH6AQ9H0K4 717 aa11.84□□□□□ -0.51
LINCMD1-201ENST00000418518 IL13P35225 146 aa11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 TMPOP42166 694 aaKnown RBP11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 EXOC6Q8TAG9 804 aa11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 KIF1AQ12756 1690 aa11.83□□□□□ -0.52
LINCMD1-201ENST00000418518 U2SURPO15042 1029 aaKnown RBP11.82□□□□□ -0.52
LINCMD1-201ENST00000418518 CT47B1P0C2W7 299 aaPredicted RBP11.82□□□□□ -0.52
LINCMD1-201ENST00000418518 MAPK8IP3Q9UPT6 1336 aa11.82□□□□□ -0.52
LINCMD1-201ENST00000418518 LTN1O94822 1766 aa11.82□□□□□ -0.52
LINCMD1-201ENST00000418518 KIF24Q5T7B8 1368 aa11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 TRPM3Q9HCF6 1732 aaPredicted RBP11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 CCDC136Q96JN2 1154 aa11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 TRIM35Q9UPQ4 493 aa11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 RRP7AQ9Y3A4 280 aaKnown RBP11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 STRCP1A6NGW2 1772 aa11.81□□□□□ -0.52
LINCMD1-201ENST00000418518 MYH16Q9H6N6 1097 aa11.8□□□□□ -0.52
LINCMD1-201ENST00000418518 PLIN1O60240 522 aa11.79□□□□□ -0.52
LINCMD1-201ENST00000418518 FBLN1P23142 703 aa11.79□□□□□ -0.52
LINCMD1-201ENST00000418518 CRBNQ96SW2 442 aa11.79□□□□□ -0.52
LINCMD1-201ENST00000418518 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
LINCMD1-201ENST00000418518 NFAT5O94916 1531 aa11.78□□□□□ -0.52
LINCMD1-201ENST00000418518 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
LINCMD1-201ENST00000418518 FLT4P35916 1363 aa11.78□□□□□ -0.52
LINCMD1-201ENST00000418518 PRKAR2BP31323 418 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 PDE3AQ14432 1141 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 RRS1Q15050 365 aaKnown RBP11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 NFE2L2Q16236 605 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 NGDNQ8NEJ9 315 aaKnown RBP11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 LRRC37A3O60309 1634 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 FANCIQ9NVI1 1328 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 DCCP43146 1447 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 MST1RQ04912 1400 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 NCOA3Q9Y6Q9 1424 aa11.77□□□□□ -0.53
LINCMD1-201ENST00000418518 SLIT3O75094 1523 aa11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 RARSP54136 660 aaKnown RBP11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
LINCMD1-201ENST00000418518 XIRP1Q702N8 1843 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms