RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 ORAI2Q96SN7 254 aa18.38■□□□□ 0.53
LTA-213ENST00000418386 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
LTA-213ENST00000418386 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
LTA-213ENST00000418386 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
LTA-213ENST00000418386 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
LTA-213ENST00000418386 TRPM3Q9HCF6 1732 aaPredicted RBP18.35■□□□□ 0.53
LTA-213ENST00000418386 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
LTA-213ENST00000418386 FYB1O15117 783 aa18.34■□□□□ 0.53
LTA-213ENST00000418386 PIK3C2AO00443 1686 aa18.34■□□□□ 0.53
LTA-213ENST00000418386 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
LTA-213ENST00000418386 SLAIN2Q9P270 581 aa18.33■□□□□ 0.53
LTA-213ENST00000418386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.32■□□□□ 0.52
LTA-213ENST00000418386 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
LTA-213ENST00000418386 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
LTA-213ENST00000418386 NHSL1Q5SYE7 1610 aa18.32■□□□□ 0.52
LTA-213ENST00000418386 CNGB1Q14028 1251 aaPredicted RBP18.32■□□□□ 0.52
LTA-213ENST00000418386 BRINP3Q76B58 766 aa18.32■□□□□ 0.52
LTA-213ENST00000418386 CERKQ8TCT0 537 aa18.31■□□□□ 0.52
LTA-213ENST00000418386 GGNBP2Q9H3C7 697 aa18.31■□□□□ 0.52
LTA-213ENST00000418386 NPHP3Q7Z494 1330 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 PXDNQ92626 1479 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 MARF1Q9Y4F3 1742 aaKnown RBP18.3■□□□□ 0.52
LTA-213ENST00000418386 FOXO3O43524 673 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 MORC1Q86VD1 984 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 NME9Q86XW9 330 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
LTA-213ENST00000418386 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
LTA-213ENST00000418386 PSME1Q06323 249 aa18.29■□□□□ 0.52
LTA-213ENST00000418386 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
LTA-213ENST00000418386 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
LTA-213ENST00000418386 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
LTA-213ENST00000418386 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
LTA-213ENST00000418386 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
LTA-213ENST00000418386 COG3Q96JB2 828 aa18.26■□□□□ 0.51
LTA-213ENST00000418386 AHDC1Q5TGY3 1603 aaPredicted RBP18.25■□□□□ 0.51
LTA-213ENST00000418386 AATKQ6ZMQ8 1374 aa18.24■□□□□ 0.51
LTA-213ENST00000418386 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
LTA-213ENST00000418386 TNS3Q68CZ2 1445 aa18.24■□□□□ 0.51
LTA-213ENST00000418386 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
LTA-213ENST00000418386 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
LTA-213ENST00000418386 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
LTA-213ENST00000418386 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
LTA-213ENST00000418386 TOM1O60784 492 aa18.22■□□□□ 0.51
LTA-213ENST00000418386 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
LTA-213ENST00000418386 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
LTA-213ENST00000418386 MED1Q15648 1581 aaPredicted RBP18.22■□□□□ 0.51
LTA-213ENST00000418386 SLIT3O75094 1523 aa18.22■□□□□ 0.51
LTA-213ENST00000418386 MAP2P11137 1827 aaKnown RBP18.22■□□□□ 0.51
LTA-213ENST00000418386 CCDC184Q52MB2 194 aa18.21■□□□□ 0.51
LTA-213ENST00000418386 DDX17Q92841 729 aaKnown RBP18.21■□□□□ 0.51
LTA-213ENST00000418386 NLRP6P59044 892 aa18.2■□□□□ 0.5
LTA-213ENST00000418386 SPATA31A3Q5VYP0 1347 aa18.19■□□□□ 0.5
LTA-213ENST00000418386 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
LTA-213ENST00000418386 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
LTA-213ENST00000418386 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
LTA-213ENST00000418386 USP19O94966 1318 aa18.18■□□□□ 0.5
LTA-213ENST00000418386 NFAT5O94916 1531 aa18.18■□□□□ 0.5
LTA-213ENST00000418386 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
LTA-213ENST00000418386 CDK12Q9NYV4 1490 aaPredicted RBP18.17■□□□□ 0.5
LTA-213ENST00000418386 UBAP1LF5GYI3 381 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 MTHFSP49914 203 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 INSRP06213 1382 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
LTA-213ENST00000418386 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
LTA-213ENST00000418386 PHLPP1O60346 1717 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 NUTM2GQ5VZR2 741 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 POLKQ9UBT6 870 aa18.15■□□□□ 0.5
LTA-213ENST00000418386 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.5
LTA-213ENST00000418386 SHPRHQ149N8 1683 aa18.14■□□□□ 0.5
LTA-213ENST00000418386 ABCA3Q99758 1704 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 PEAK1Q9H792 1746 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 LTN1O94822 1766 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 KIF24Q5T7B8 1368 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 KCNH5Q8NCM2 988 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 CFAP53Q96M91 514 aa18.13■□□□□ 0.49
LTA-213ENST00000418386 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
LTA-213ENST00000418386 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
LTA-213ENST00000418386 COL22A1Q8NFW1 1626 aaPredicted RBP18.11■□□□□ 0.49
LTA-213ENST00000418386 FBLN1P23142 703 aa18.11■□□□□ 0.49
LTA-213ENST00000418386 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
LTA-213ENST00000418386 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
LTA-213ENST00000418386 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
LTA-213ENST00000418386 MAP3K19Q56UN5 1328 aa18.1■□□□□ 0.49
LTA-213ENST00000418386 PIP4K2BP78356 416 aa18.09■□□□□ 0.49
LTA-213ENST00000418386 FLT4P35916 1363 aa18.09■□□□□ 0.49
LTA-213ENST00000418386 GCP02774 474 aa18.08■□□□□ 0.49
LTA-213ENST00000418386 MYT1Q01538 1121 aa18.08■□□□□ 0.49
LTA-213ENST00000418386 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.49
LTA-213ENST00000418386 ABCC6O95255 1503 aa18.08■□□□□ 0.48
LTA-213ENST00000418386 SOX12O15370 315 aa18.07■□□□□ 0.48
LTA-213ENST00000418386 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
LTA-213ENST00000418386 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
LTA-213ENST00000418386 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
LTA-213ENST00000418386 CPDO75976 1380 aa18.05■□□□□ 0.48
LTA-213ENST00000418386 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
LTA-213ENST00000418386 WDR43Q15061 677 aaKnown RBP eCLIP18.04■□□□□ 0.48
LTA-213ENST00000418386 BLMP54132 1417 aaPredicted RBP18.04■□□□□ 0.48
LTA-213ENST00000418386 AMPHP49418 695 aa18.03■□□□□ 0.48
LTA-213ENST00000418386 RGPD1P0DJD0 1748 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms